HHsearch alignment for GI: 255764511 and conserved domain: COG2265

>COG2265 TrmA SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].
Probab=97.25  E-value=0.0033  Score=41.41  Aligned_cols=97  Identities=21%  Similarity=0.203  Sum_probs=76.1

Q ss_pred             CCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHH
Q ss_conf             16078334009868866083888889983768828899999748909998099899999999852148-85277113278
Q gi|255764511|r   15 HTIGDHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFS   93 (341)
Q Consensus        15 ~~~~~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~   93 (341)
T Consensus       272 Q~N~~~~ekl~~~a~~~~~~~~~~~vlDlYCGvG~f~l~lA~~~~~V~gvEi~~~aV~~A~~NA~~n~i~N~~f~~~~ae  351 (432)
T COG2265         272 QVNPAVAEKLYETALEWLELAGGERVLDLYCGVGTFGLPLAKRVKKVHGVEISPEAVEAAQENAAANGIDNVEFIAGDAE  351 (432)
T ss_pred             EECHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHH
T ss_conf             33999999999999999743699779993558870135531246579999648999999999999739887799958688


Q ss_pred             HHHHHHH-HCCCCEEEEEC
Q ss_conf             8987653-12332478622
Q gi|255764511|r   94 QLQDYVP-DKGVDGVVFDL  111 (341)
Q Consensus        94 ~i~~~l~-~~~vdgIl~DL  111 (341)
T Consensus       352 ~~~~~~~~~~~~d~VvvDP  370 (432)
T COG2265         352 EFTPAWWEGYKPDVVVVDP  370 (432)
T ss_pred             HHHHHHCCCCCCCEEEECC
T ss_conf             8865100257999899899