HHsearch alignment for GI: 255764511 and conserved domain: COG2265
>COG2265 TrmA SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].
Probab=97.25 E-value=0.0033 Score=41.41 Aligned_cols=97 Identities=21% Similarity=0.203 Sum_probs=76.1
Q ss_pred CCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHH
Q ss_conf 16078334009868866083888889983768828899999748909998099899999999852148-85277113278
Q gi|255764511|r 15 HTIGDHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFS 93 (341)
Q Consensus 15 ~~~~~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~ 93 (341)
T Consensus 272 Q~N~~~~ekl~~~a~~~~~~~~~~~vlDlYCGvG~f~l~lA~~~~~V~gvEi~~~aV~~A~~NA~~n~i~N~~f~~~~ae 351 (432)
T COG2265 272 QVNPAVAEKLYETALEWLELAGGERVLDLYCGVGTFGLPLAKRVKKVHGVEISPEAVEAAQENAAANGIDNVEFIAGDAE 351 (432)
T ss_pred EECHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHH
T ss_conf 33999999999999999743699779993558870135531246579999648999999999999739887799958688
Q ss_pred HHHHHHH-HCCCCEEEEEC
Q ss_conf 8987653-12332478622
Q gi|255764511|r 94 QLQDYVP-DKGVDGVVFDL 111 (341)
Q Consensus 94 ~i~~~l~-~~~vdgIl~DL 111 (341)
T Consensus 352 ~~~~~~~~~~~~d~VvvDP 370 (432)
T COG2265 352 EFTPAWWEGYKPDVVVVDP 370 (432)
T ss_pred HHHHHHCCCCCCCEEEECC
T ss_conf 8865100257999899899