HHsearch alignment for GI: 255764511 and conserved domain: KOG2899

Probab=90.19  E-value=0.44  Score=27.64  Aligned_cols=144  Identities=21%  Similarity=0.231  Sum_probs=80.1

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHC-C-EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             88889983768828899999748-9-099980998999999998521488527711327889876531233247862252
Q gi|255764511|r   36 PGKVILDATFGAGGYSRSFCKMG-S-NVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGV  113 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS~~iL~~~-~-~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGv  113 (341)
T Consensus        58 ~~~~~LDIGCNsG~lt~~iak~F~~r~iLGvDID~~LI~~Ark~~r~~~~~~~~~~---------------~~~~~~~~~  122 (288)
T KOG2899          58 EPKQALDIGCNSGFLTLSIAKDFGPRRILGVDIDPVLIQRARKEIRFPCDHETEVS---------------GKFPASFGV  122 (288)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCC---------------CCCCCCCCC
T ss_conf             76205750677546589999860643346761568999999973566010103345---------------787543354


Q ss_pred             HHHHHHHHHHCCC---CCCCCCEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH
Q ss_conf             0788876540734---4566410104355684189998622257899899974463026889999999975212432137
Q gi|255764511|r  114 SSMQIDCGDRGFS---FQKSGPLDMRMSCSGISASDVVNQANVKDLTRILGILGEEKQASRIAHAIVKRRQSAPFQTTQD  190 (341)
Q Consensus       114 SS~Qld~~~RGFS---f~~dgpLDMRmd~~~~tA~eiln~~s~~~L~~i~~~yGee~~a~~IA~~Iv~~R~~~~i~TT~e  190 (341)
T Consensus       123 ~~~~is~--~~~a~~a~t~~~p~n~~-----------------------------------------f~~~n~vl-e~~d  158 (288)
T KOG2899         123 QFGPISQ--RNEADRAFTTDFPDNVW-----------------------------------------FQKENYVL-ESDD  158 (288)
T ss_pred             CCCCCCC--CCCCCCCCCCCCCCCHH-----------------------------------------CCCCCEEE-ECCH
T ss_conf             4454101--24466510036772010-----------------------------------------13233798-6004


Q ss_pred             HHHHHHHHHHHHHCCCCH--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             999999887643127712--5788888876651340578999999885202445338998
Q gi|255764511|r  191 LSSLIQKTVYFSKNNRIH--PATRSFQALRIFVNNEIEELAQGLRSAEKALKAGGLLIVV  248 (341)
Q Consensus       191 L~~iI~~~~~~~~~~k~h--patr~FQALRI~VN~El~~L~~~L~~~~~~L~~gGrl~VI  248 (341)
T Consensus       159 fl~~~~~~-----fDiIlcLSiTk-----WIHLNwgD~GL~~ff~kis~ll~pgGiLvvE  208 (288)
T KOG2899         159 FLDMIQPE-----FDIILCLSITK-----WIHLNWGDDGLRRFFRKISSLLHPGGILVVE  208 (288)
T ss_pred             HHHHCCCC-----CCEEEEEEEEE-----EEECCCCCHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf             55505654-----22799977334-----6764564578999999999860868579975