HHsearch alignment for GI: 255764511 and conserved domain: pfam05175
>pfam05175 MTS Methyltransferase small domain. This domain is found in ribosomal RNA small subunit methyltransferase C as well as other methyltransferases .
Probab=96.59 E-value=0.013 Score=37.64 Aligned_cols=80 Identities=18% Similarity=0.208 Sum_probs=59.9
Q ss_pred HHHHCCCCCCEEEECCCCCCHHHHHHHHHCC--EEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHHHCCCC
Q ss_conf 8660838888899837688288999997489--09998099899999999852148-85277113278898765312332
Q gi|255764511|r 29 IALLNPAPGKVILDATFGAGGYSRSFCKMGS--NVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVPDKGVD 105 (341)
Q Consensus 29 l~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~--~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~~~~vd 105 (341)
T Consensus 24 l~~l~~~~~g~vLDlGcG~G~i~~~la~~~p~~~v~~vDi~~~Al~~a~~N~~~n~l~~v~v~~~D~~~---~~~~~~fD 100 (170)
T pfam05175 24 LSHLPKPLGGKVLDLGCGYGVLGAALAKRSPDLEVTMVDINARALESARANLAANGLENGEVFWSDLYS---AVEPGKFD 100 (170)
T ss_pred HHCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC---CCCCCCEE
T ss_conf 970897789949997764829899999978986798515449999999999998099848999744666---57788660
Q ss_pred EEEEEC
Q ss_conf 478622
Q gi|255764511|r 106 GVVFDL 111 (341)
Q Consensus 106 gIl~DL 111 (341)
T Consensus 101 ~IvsNP 106 (170)
T pfam05175 101 LIISNP 106 (170)
T ss_pred EEEECC
T ss_conf 899897