HHsearch results for GI: 255764511 and protein with PDBid: 1ne2_A
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.53 E-value=0.0093 Score=37.06 Aligned_cols=74 Identities=20% Similarity=0.262 Sum_probs=54.9
Q ss_pred HHCCCCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEE
Q ss_conf 60838888899837688288999997489-09998099899999999852148852771132788987653123324786
Q gi|255764511|r 31 LLNPAPGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVF 109 (341)
Q Consensus 31 ~l~~~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~ 109 (341)
.+....|..++|.-.|.|.-+.+.+..++ +|+|+|.|++|+..|++++. ++.+++++..++ ..++|-|+.
T Consensus 46 ~~gd~~Gk~VLDlGcGtG~l~i~a~~~ga~~V~~vDid~~a~~~a~~N~~----~~~~~~~d~~~~-----~~~fD~Vi~ 116 (200)
T 1ne2_A 46 NDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSEI-----SGKYDTWIM 116 (200)
T ss_dssp HHTSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGGC-----CCCEEEEEE
T ss_pred HCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH----HCCCEEEEHHHC-----CCCCCEEEE
T ss_conf 66998939899875751099999996799879675089999999999898----578537652105-----775488987
Q ss_pred ECCC
Q ss_conf 2252
Q gi|255764511|r 110 DLGV 113 (341)
Q Consensus 110 DLGv 113 (341)
|-=+
T Consensus 117 NPPf 120 (200)
T 1ne2_A 117 NPPF 120 (200)
T ss_dssp CCCC
T ss_pred CCCC
T ss_conf 7986