HHsearch results for GI: 255764511 and protein with PDBid: 1xj5_A
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=95.61 E-value=0.047 Score=32.54 Aligned_cols=79 Identities=22% Similarity=0.368 Sum_probs=55.3
Q ss_pred HCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHH----C-CCCEEEECCC-HHHHHHHHHHCC
Q ss_conf 083888889983768828899999748--9099980998999999998521----4-8852771132-788987653123
Q gi|255764511|r 32 LNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRD----Y-KEQFSLFQAT-FSQLQDYVPDKG 103 (341)
Q Consensus 32 l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~----~-~~r~~~~~~~-F~~i~~~l~~~~ 103 (341)
..+.|..+.| .=.|.||=.+.+|+.. .++..+|.|++.+..|++-+.. + ..|+.++.+. +.-+.+ ..+..
T Consensus 117 ~h~~PkrVLI-IGgGdG~~~revlk~~~v~~v~~VEID~~Vi~~a~~~fp~~~~~~~dprv~iii~Dg~~~l~~-~~~~~ 194 (334)
T 1xj5_A 117 SIPNPKKVLV-IGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKN-AAEGS 194 (334)
T ss_dssp TSSCCCEEEE-ETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHT-SCTTC
T ss_pred CCCCCCEEEE-ECCCCHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHH-CCCCC
T ss_conf 1999886999-889948999999974996533575058999999997534430235799879998627999751-53356
Q ss_pred CCEEEEECC
Q ss_conf 324786225
Q gi|255764511|r 104 VDGVVFDLG 112 (341)
Q Consensus 104 vdgIl~DLG 112 (341)
+|.|+.|+-
T Consensus 195 yDvIIvD~~ 203 (334)
T 1xj5_A 195 YDAVIVDSS 203 (334)
T ss_dssp EEEEEECCC
T ss_pred CCEEEEECC
T ss_conf 677999789