HHsearch results for GI: 255764511 and protein with PDBid: 1xj5_A

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=95.61  E-value=0.047  Score=32.54  Aligned_cols=79  Identities=22%  Similarity=0.368  Sum_probs=55.3

Q ss_pred             HCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHH----C-CCCEEEECCC-HHHHHHHHHHCC
Q ss_conf             083888889983768828899999748--9099980998999999998521----4-8852771132-788987653123
Q gi|255764511|r   32 LNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRD----Y-KEQFSLFQAT-FSQLQDYVPDKG  103 (341)
Q Consensus        32 l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~----~-~~r~~~~~~~-F~~i~~~l~~~~  103 (341)
                      ..+.|..+.| .=.|.||=.+.+|+..  .++..+|.|++.+..|++-+..    + ..|+.++.+. +.-+.+ ..+..
T Consensus       117 ~h~~PkrVLI-IGgGdG~~~revlk~~~v~~v~~VEID~~Vi~~a~~~fp~~~~~~~dprv~iii~Dg~~~l~~-~~~~~  194 (334)
T 1xj5_A          117 SIPNPKKVLV-IGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKN-AAEGS  194 (334)
T ss_dssp             TSSCCCEEEE-ETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHT-SCTTC
T ss_pred             CCCCCCEEEE-ECCCCHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHH-CCCCC
T ss_conf             1999886999-889948999999974996533575058999999997534430235799879998627999751-53356


Q ss_pred             CCEEEEECC
Q ss_conf             324786225
Q gi|255764511|r  104 VDGVVFDLG  112 (341)
Q Consensus       104 vdgIl~DLG  112 (341)
                      +|.|+.|+-
T Consensus       195 yDvIIvD~~  203 (334)
T 1xj5_A          195 YDAVIVDSS  203 (334)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEEECC
T ss_conf             677999789