HHsearch results for GI: 255764511 and protein with PDBid: 2yqz_A
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus HB8} PDB: 2yr0_A
Probab=97.96 E-value=1.8e-05 Score=54.54 Aligned_cols=115 Identities=19% Similarity=0.269 Sum_probs=87.5
Q ss_pred CCCCCCHHHHHHH----HHCCC-CCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCH
Q ss_conf 7833400986886----60838-888899837688288999997489099980998999999998521488527711327
Q gi|255764511|r 18 GDHVPVLLEKVIA----LLNPA-PGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATF 92 (341)
Q Consensus 18 ~~H~PVll~Evl~----~l~~~-~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F 92 (341)
-.|.|.-...+.. .+.+. ++..++|.-.|.|+.|..+...+.+|+|+|..+.+++.|++++...+.++.+.+++.
T Consensus 16 ~~~~~~~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~t~~la~~~~~V~gvD~S~~~l~~a~~r~~~~~~~v~~~~~da 95 (263)
T 2yqz_A 16 RAHPPEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADA 95 (263)
T ss_dssp HCCCHHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHCC
T ss_conf 65678999999999998612358999899951788699999996699899998989999998740210114410222012
Q ss_pred HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCC-----CCCCCCEECC
Q ss_conf 8898765312332478622520788876540734-----4566410104
Q gi|255764511|r 93 SQLQDYVPDKGVDGVVFDLGVSSMQIDCGDRGFS-----FQKSGPLDMR 136 (341)
Q Consensus 93 ~~i~~~l~~~~vdgIl~DLGvSS~Qld~~~RGFS-----f~~dgpLDMR 136 (341)
.++. +++..+|.|+.-.++ ++++++.+.|. .+.+|.|=..
T Consensus 96 ~~l~--~~~~sfD~V~~~~~l--~~~~d~~~~l~e~~r~LkPGG~l~~~ 140 (263)
T 2yqz_A 96 RAIP--LPDESVHGVIVVHLW--HLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp TSCC--SCTTCEEEEEEESCG--GGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCC--CCCCCCCEEEECCHH--HHCCCHHHHHHHHHHHCCCCCEEEEE
T ss_conf 2234--667610478751227--75589999999999985808389999