HHsearch results for GI: 255764511 and protein with PDBid: 3a27_A
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.11 E-value=0.0044 Score=39.18 Aligned_cols=88 Identities=17% Similarity=0.156 Sum_probs=60.1
Q ss_pred CCHHHHHHHHHC-CCCCCEEEECCCCCCHHHHHHHHH--CCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHH
Q ss_conf 400986886608-388888998376882889999974--8909998099899999999852148-852771132788987
Q gi|255764511|r 22 PVLLEKVIALLN-PAPGKVILDATFGAGGYSRSFCKM--GSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQD 97 (341)
Q Consensus 22 PVll~Evl~~l~-~~~~g~~iD~TlG~GGHS~~iL~~--~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~ 97 (341)
|=+..|-..... ..+|.+++|+--|-|+.+..+++. ..+|+|+|.+|+|+..++++++..+ .+...+++...++
T Consensus 104 ~r~~~Er~ri~~~v~~ge~VlDl~aG~G~~~i~~ak~~~~~~V~aiDinp~av~~l~~N~~~N~v~n~~~i~~D~r~~-- 181 (272)
T 3a27_A 104 QGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-- 181 (272)
T ss_dssp GGGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC--
T ss_pred CCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCC--
T ss_conf 987799999873458999999937865889999875069509999959999999999999984999759992776534--
Q ss_pred HHHHCCCCEEEEECC
Q ss_conf 653123324786225
Q gi|255764511|r 98 YVPDKGVDGVVFDLG 112 (341)
Q Consensus 98 ~l~~~~vdgIl~DLG 112 (341)
.....+|-|++++-
T Consensus 182 -~~~~~fD~Vimn~p 195 (272)
T 3a27_A 182 -ELKDVADRVIMGYV 195 (272)
T ss_dssp -CCTTCEEEEEECCC
T ss_pred -CCCCCCCEEEECCC
T ss_conf -55788889997895