Query         gi|255764511|ref|YP_003065518.2| S-adenosyl-methyltransferase MraW [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 341
No_of_seqs    132 out of 2545
Neff          5.3 
Searched_HMMs 23785
Date          Wed Jun  1 01:18:03 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 255764511.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1wg8_A Predicted S-adenosylmet 100.0       0       0  784.4  30.6  278   18-318     4-284 (285)
  2 1m6y_A S-adenosyl-methyltransf 100.0       0       0  774.8  29.7  288   13-320     3-299 (301)
  3 3mti_A RRNA methylase; SAM-dep  98.6 1.4E-07 6.1E-12   68.1   9.1   89   24-113     8-99  (185)
  4 1vl5_A Unknown conserved prote  98.6 7.4E-07 3.1E-11   63.6  11.9   98   24-125    25-123 (260)
  5 1dus_A MJ0882; hypothetical pr  98.6   2E-06 8.2E-11   60.8  14.0   86   25-113    41-129 (194)
  6 3eey_A Putative rRNA methylase  98.4 1.2E-06   5E-11   62.3   8.9   85   24-114    15-104 (197)
  7 2b25_A Hypothetical protein; s  98.4 8.4E-07 3.5E-11   63.2   7.8   88   25-112    94-196 (336)
  8 3gdh_A Trimethylguanosine synt  98.3 3.1E-06 1.3E-10   59.6   9.4   78   33-113    75-154 (241)
  9 2yxd_A Probable cobalt-precorr  98.3 1.2E-05 5.2E-10   55.7  11.4   87   26-115    25-112 (183)
 10 3dtn_A Putative methyltransfer  98.2 1.9E-05 8.2E-10   54.4  11.2   95   24-124    31-128 (234)
 11 2yvl_A TRMI protein, hypotheti  98.2 1.2E-05   5E-10   55.8   9.9   90   21-112    76-167 (248)
 12 1i9g_A Hypothetical protein RV  98.2 9.3E-06 3.9E-10   56.5   9.0   89   21-111    84-179 (280)
 13 1zx0_A Guanidinoacetate N-meth  98.2 1.1E-05 4.5E-10   56.1   8.9   93   20-112    38-137 (236)
 14 1o54_A SAM-dependent O-methylt  98.2 1.9E-05   8E-10   54.5  10.2   86   24-112   100-190 (277)
 15 1l3i_A Precorrin-6Y methyltran  98.1 2.7E-05 1.1E-09   53.4  10.4   81   27-109    24-106 (192)
 16 3ll7_A Putative methyltransfer  98.1 1.2E-05 5.1E-10   55.7   8.6   78   35-112    92-172 (410)
 17 1yb2_A Hypothetical protein TA  98.1 9.7E-06 4.1E-10   56.3   8.1   85   25-112    99-188 (275)
 18 3dmg_A Probable ribosomal RNA   98.1 9.3E-05 3.9E-09   50.0  12.1   41  224-264   315-356 (381)
 19 3dlc_A Putative S-adenosyl-L-m  98.1 4.2E-06 1.7E-10   58.7   5.1  105   16-125    24-131 (219)
 20 2pwy_A TRNA (adenine-N(1)-)-me  98.0 5.3E-05 2.2E-09   51.6   9.5   92   19-112    79-175 (258)
 21 1wzn_A SAM-dependent methyltra  98.0 4.9E-05 2.1E-09   51.8   9.3   83   24-109    29-111 (252)
 22 2r6z_A UPF0341 protein in RSP   98.0   6E-05 2.5E-09   51.3   9.5   84   30-113    77-171 (258)
 23 2yqz_A Hypothetical protein TT  98.0 1.8E-05 7.7E-10   54.5   6.8  115   18-136    16-140 (263)
 24 3mb5_A SAM-dependent methyltra  97.9 0.00012   5E-09   49.3  10.4   89   21-112    78-171 (255)
 25 1dl5_A Protein-L-isoaspartate   97.9 0.00012   5E-09   49.3  10.3   94   20-115    59-156 (317)
 26 3dh0_A SAM dependent methyltra  97.9 4.5E-05 1.9E-09   52.0   7.9   86   24-111    25-114 (219)
 27 3bkx_A SAM-dependent methyltra  97.9 2.1E-05   9E-10   54.1   6.1  110   24-135    31-157 (275)
 28 1wy7_A Hypothetical protein PH  97.9 9.1E-05 3.8E-09   50.1   9.2   79   30-113    43-122 (207)
 29 1xxl_A YCGJ protein; structura  97.9 2.5E-05 1.1E-09   53.7   6.1  106   25-134    10-121 (239)
 30 2yxe_A Protein-L-isoaspartate   97.8 0.00011 4.6E-09   49.5   9.1   92   21-115    62-158 (215)
 31 3bus_A REBM, methyltransferase  97.8 0.00014 5.9E-09   48.8   9.3  106   24-133    49-162 (273)
 32 2p8j_A S-adenosylmethionine-de  97.8 3.1E-05 1.3E-09   53.1   5.6   87   20-108     7-94  (209)
 33 2b9e_A NOL1/NOP2/SUN domain fa  97.8 0.00015 6.3E-09   48.7   9.0   89   28-116    94-187 (309)
 34 3ajd_A Putative methyltransfer  97.8 0.00043 1.8E-08   45.7  11.3   89   28-116    75-169 (274)
 35 3ccf_A Cyclopropane-fatty-acyl  97.8 2.5E-05   1E-09   53.7   4.8   97   21-126    42-138 (279)
 36 3e05_A Precorrin-6Y C5,15-meth  97.7 0.00022 9.4E-09   47.5   9.2   66   28-93     32-100 (204)
 37 1nkv_A Hypothetical protein YJ  97.7 0.00017 7.1E-09   48.3   8.5   87   20-109    20-109 (256)
 38 2nxc_A L11 mtase, ribosomal pr  97.7 0.00037 1.5E-08   46.1  10.1   96   11-111    95-192 (254)
 39 1ws6_A Methyltransferase; stru  97.7 0.00048   2E-08   45.4  10.6   93   20-112    22-119 (171)
 40 3m70_A Tellurite resistance pr  97.7 0.00014 5.7E-09   48.9   7.7   88   20-110   104-191 (286)
 41 1jg1_A PIMT;, protein-L-isoasp  97.7 0.00038 1.6E-08   46.1   9.7   92   21-115    76-170 (235)
 42 3ege_A Putative methyltransfer  97.6 3.2E-05 1.3E-09   53.0   3.8  118   10-136     5-130 (261)
 43 1vbf_A 231AA long hypothetical  97.6 0.00056 2.4E-08   44.9  10.1   92   20-115    54-146 (231)
 44 3lpm_A Putative methyltransfer  97.6 0.00032 1.3E-08   46.6   8.9   80   34-113    47-129 (259)
 45 2o57_A Putative sarcosine dime  97.6 0.00013 5.5E-09   49.0   6.9   99   24-126    70-171 (297)
 46 2frn_A Hypothetical protein PH  97.6 0.00048   2E-08   45.4   9.4   93   19-114   107-203 (278)
 47 3hnr_A Probable methyltransfer  97.6 0.00016 6.9E-09   48.4   6.9   91   25-123    34-124 (220)
 48 3kkz_A Uncharacterized protein  97.6 0.00031 1.3E-08   46.6   8.2   94   27-125    36-133 (267)
 49 1sqg_A SUN protein, FMU protei  97.5 0.00035 1.5E-08   46.3   8.0   89   28-117   238-329 (429)
 50 2yxl_A PH0851 protein, 450AA l  97.5 0.00033 1.4E-08   46.5   7.8   88   28-115   251-342 (450)
 51 1ve3_A Hypothetical protein PH  97.5 0.00045 1.9E-08   45.6   8.2   82   25-109    28-109 (227)
 52 3m4x_A NOL1/NOP2/SUN family pr  97.5  0.0016 6.9E-08   42.0  10.9   87   28-115    97-187 (456)
 53 1uwv_A 23S rRNA (uracil-5-)-me  97.5 0.00049 2.1E-08   45.3   8.2   90   21-110   271-363 (433)
 54 2ipx_A RRNA 2'-O-methyltransfe  97.4 0.00069 2.9E-08   44.4   8.5   84   28-112    69-156 (233)
 55 2esr_A Methyltransferase; stru  97.4  0.0028 1.2E-07   40.4  11.4   89   24-113    17-110 (177)
 56 1ixk_A Methyltransferase; open  97.4  0.0016 6.6E-08   42.1   9.8   86   28-115   110-199 (315)
 57 3fpf_A Mtnas, putative unchara  97.4   0.002 8.4E-08   41.4  10.3   81   24-108   110-193 (298)
 58 1i1n_A Protein-L-isoaspartate   97.4  0.0019 7.9E-08   41.5  10.0   91   21-114    60-162 (226)
 59 3m6w_A RRNA methylase; rRNA me  97.4  0.0029 1.2E-07   40.4  10.7   88   28-116    93-183 (464)
 60 3f4k_A Putative methyltransfer  97.3   0.001 4.2E-08   43.3   8.2   92   20-113    29-124 (257)
 61 3hm2_A Precorrin-6Y C5,15-meth  97.3   0.001 4.2E-08   43.3   8.1   70   24-93     13-85  (178)
 62 3fzg_A 16S rRNA methylase; met  97.3  0.0027 1.1E-07   40.5  10.2   99   20-125    32-135 (200)
 63 1nv8_A HEMK protein; class I a  97.3  0.0015 6.3E-08   42.2   8.8   92   23-115   110-204 (284)
 64 1y8c_A S-adenosylmethionine-de  97.3 0.00054 2.3E-08   45.0   6.6   72   35-109    36-107 (246)
 65 2pbf_A Protein-L-isoaspartate   97.3   0.003 1.3E-07   40.2  10.4   94   21-115    63-174 (227)
 66 1xtp_A LMAJ004091AAA; SGPP, st  97.3 0.00097 4.1E-08   43.4   7.8   93   25-122    82-175 (254)
 67 3g5t_A Trans-aconitate 3-methy  97.3  0.0017 7.2E-08   41.8   8.9  111   20-133    20-145 (299)
 68 3g2m_A PCZA361.24; SAM-depende  97.3 0.00057 2.4E-08   44.9   6.5   80   26-109    73-156 (299)
 69 3h2b_A SAM-dependent methyltra  97.3 0.00092 3.9E-08   43.6   7.5   88   24-119    29-116 (203)
 70 2fhp_A Methylase, putative; al  97.3  0.0041 1.7E-07   39.4  10.9   90   24-113    30-126 (187)
 71 2oyr_A UPF0341 protein YHIQ; a  97.2   0.001 4.3E-08   43.2   7.5   75   36-111    88-172 (258)
 72 2ex4_A Adrenal gland protein A  97.2 0.00059 2.5E-08   44.8   6.3   86   33-122    76-163 (241)
 73 2i6g_A Putative methyltransfer  97.2 0.00052 2.2E-08   45.2   5.9   80   27-109    22-102 (199)
 74 1nw3_A Histone methyltransfera  97.2  0.0031 1.3E-07   40.1   9.9   77   20-96    139-227 (416)
 75 2as0_A Hypothetical protein PH  97.2  0.0045 1.9E-07   39.1  10.3   80   34-113   215-299 (396)
 76 2frx_A Hypothetical protein YE  97.2  0.0037 1.6E-07   39.7   9.8   86   32-118   113-202 (479)
 77 3dr5_A Putative O-methyltransf  97.2  0.0047   2E-07   39.0  10.3   82   33-114    53-140 (221)
 78 1wxx_A TT1595, hypothetical pr  97.2  0.0034 1.4E-07   39.9   9.6   84   31-114   204-290 (382)
 79 1pjz_A Thiopurine S-methyltran  97.2  0.0018 7.5E-08   41.7   8.0   61   21-81      7-67  (203)
 80 3bkw_A MLL3908 protein, S-aden  97.1 0.00093 3.9E-08   43.5   6.4   91   28-124    35-126 (243)
 81 2kw5_A SLR1183 protein; struct  97.1  0.0016 6.6E-08   42.1   7.5   68   24-94     20-87  (202)
 82 2ozv_A Hypothetical protein AT  97.1  0.0021   9E-08   41.2   8.2   89   20-111    23-123 (260)
 83 3a27_A TYW2, uncharacterized p  97.1  0.0044 1.8E-07   39.2   9.6   88   22-112   104-195 (272)
 84 3bxo_A N,N-dimethyltransferase  97.1  0.0014 6.1E-08   42.3   7.0   76   26-109    31-106 (239)
 85 3d2l_A SAM-dependent methyltra  97.1  0.0016 6.7E-08   42.0   7.2   84   20-109    19-102 (243)
 86 1ri5_A MRNA capping enzyme; me  97.0  0.0019 7.8E-08   41.6   7.0   59   33-91     61-122 (298)
 87 1g8a_A Fibrillarin-like PRE-rR  97.0  0.0022 9.3E-08   41.1   7.4   87   24-111    61-151 (227)
 88 3g5l_A Putative S-adenosylmeth  97.0  0.0027 1.1E-07   40.6   7.8   79   27-109    35-114 (253)
 89 3l8d_A Methyltransferase; stru  97.0 0.00058 2.5E-08   44.8   4.4   85   35-125    52-136 (242)
 90 1xva_A Glycine N-methyltransfe  97.0  0.0059 2.5E-07   38.3   9.5   86   24-109    44-135 (292)
 91 3bt7_A TRNA (uracil-5-)-methyl  97.0   0.011 4.8E-07   36.5  10.9   78   21-99    199-277 (369)
 92 3mgg_A Methyltransferase; NYSG  97.0  0.0049 2.1E-07   38.9   9.0   96   24-123    25-123 (276)
 93 3evz_A Methyltransferase; NYSG  97.0  0.0033 1.4E-07   40.0   7.9   81   29-110    48-130 (230)
 94 2qm3_A Predicted methyltransfe  97.0  0.0029 1.2E-07   40.4   7.5   80   34-113   170-251 (373)
 95 3e8s_A Putative SAM dependent   96.9   0.002 8.3E-08   41.4   6.6   61   20-80     36-96  (227)
 96 3m33_A Uncharacterized protein  96.9   0.002 8.3E-08   41.4   6.4   61   19-79     31-91  (226)
 97 3hvi_A Catechol O-methyltransf  96.9   0.013 5.3E-07   36.2  10.4   80   36-115    58-146 (221)
 98 2avn_A Ubiquinone/menaquinone   96.9  0.0013 5.6E-08   42.5   5.4   84   34-125    52-135 (260)
 99 1r18_A Protein-L-isoaspartate(  96.9  0.0077 3.2E-07   37.6   9.2   92   21-115    67-175 (227)
100 2p35_A Trans-aconitate 2-methy  96.9  0.0019 8.1E-08   41.5   6.0   93   25-126    22-116 (259)
101 2p7i_A Hypothetical protein; p  96.9  0.0023 9.5E-08   41.0   6.3   96   19-125    28-123 (250)
102 1qam_A ERMC' methyltransferase  96.9  0.0067 2.8E-07   38.0   8.7   97   20-119    14-112 (244)
103 3gru_A Dimethyladenosine trans  96.9  0.0071   3E-07   37.8   8.8   96   20-118    34-131 (295)
104 2fk8_A Methoxy mycolic acid sy  96.8   0.012 4.9E-07   36.4   9.6   86   23-113    77-165 (318)
105 1im8_A YECO; methyltransferase  96.8  0.0066 2.8E-07   38.0   8.1   99   22-124    42-148 (244)
106 3ofk_A Nodulation protein S; N  96.8  0.0038 1.6E-07   39.6   6.8   75   31-109    46-120 (216)
107 3lcc_A Putative methyl chlorid  96.7   0.002 8.6E-08   41.3   5.3   80   25-108    56-137 (235)
108 3c0k_A UPF0064 protein YCCW; P  96.7   0.015 6.1E-07   35.8   9.6   77   36-112   220-302 (396)
109 3ocj_A Putative exported prote  96.7  0.0029 1.2E-07   40.4   5.9   81   26-111   110-195 (305)
110 2igt_A SAM dependent methyltra  96.7   0.018 7.5E-07   35.2  10.0   96   16-111   126-233 (332)
111 1fbn_A MJ fibrillarin homologu  96.7  0.0068 2.9E-07   37.9   7.7   84   28-112    66-152 (230)
112 3gu3_A Methyltransferase; alph  96.7  0.0047   2E-07   39.0   6.8   88   33-125    19-109 (284)
113 2gpy_A O-methyltransferase; st  96.7   0.015 6.3E-07   35.7   9.3   99   18-116    32-139 (233)
114 2vdw_A Vaccinia virus capping   96.7  0.0058 2.4E-07   38.4   7.2   63   21-83     31-96  (302)
115 3grz_A L11 mtase, ribosomal pr  96.6   0.019 7.8E-07   35.1   9.6   94   12-110    36-132 (205)
116 3id6_C Fibrillarin-like rRNA/T  96.6  0.0094   4E-07   37.0   8.0   84   29-113    69-156 (232)
117 2fca_A TRNA (guanine-N(7)-)-me  96.6   0.023 9.5E-07   34.6  10.0   77   36-112    38-117 (213)
118 3ggd_A SAM-dependent methyltra  96.6   0.009 3.8E-07   37.2   7.9   61   34-96     54-114 (245)
119 3lcv_B Sisomicin-gentamicin re  96.6  0.0046 1.9E-07   39.1   6.3   85   35-124   131-217 (281)
120 3jwh_A HEN1; methyltransferase  96.6  0.0085 3.6E-07   37.3   7.6   86   24-111    17-110 (217)
121 2b3t_A Protein methyltransfera  96.6   0.023 9.8E-07   34.5   9.8   69   23-92     97-168 (276)
122 1u2z_A Histone-lysine N-methyl  96.6   0.011 4.5E-07   36.7   8.1   70   14-83    220-291 (433)
123 3jwg_A HEN1, methyltransferase  96.6  0.0086 3.6E-07   37.3   7.6   58   24-81     17-76  (219)
124 2b78_A Hypothetical protein SM  96.5   0.019 7.9E-07   35.1   9.2   77   34-110   210-292 (385)
125 1ne2_A Hypothetical protein TA  96.5  0.0093 3.9E-07   37.1   7.5   74   31-113    46-120 (200)
126 1zq9_A Probable dimethyladenos  96.5   0.014 5.8E-07   36.0   8.3   91   20-114    12-104 (285)
127 3c3p_A Methyltransferase; NP_9  96.5   0.015 6.5E-07   35.7   8.4   95   19-115    35-138 (210)
128 3bgv_A MRNA CAP guanine-N7 met  96.5  0.0096   4E-07   37.0   7.3   61   21-81     17-80  (313)
129 2yx1_A Hypothetical protein MJ  96.5   0.011 4.6E-07   36.6   7.6   73   21-94    179-254 (336)
130 3hem_A Cyclopropane-fatty-acyl  96.5   0.036 1.5E-06   33.3  10.2   81   24-109    60-143 (302)
131 3cgg_A SAM-dependent methyltra  96.5  0.0072   3E-07   37.8   6.6   52   27-79     38-89  (195)
132 3lbf_A Protein-L-isoaspartate   96.5   0.032 1.4E-06   33.6   9.9   93   20-115    61-155 (210)
133 3kr9_A SAM-dependent methyltra  96.5   0.026 1.1E-06   34.2   9.4   86   25-114     6-96  (225)
134 3lec_A NADB-rossmann superfami  96.4   0.021 8.8E-07   34.8   8.8   93   19-115     6-103 (230)
135 1nt2_A Fibrillarin-like PRE-rR  96.4   0.019 7.8E-07   35.1   8.5   79   32-111    53-134 (210)
136 3iv6_A Putative Zn-dependent a  96.4   0.018 7.7E-07   35.2   8.5   83   27-111    35-118 (261)
137 3ou2_A SAM-dependent methyltra  96.4  0.0076 3.2E-07   37.6   6.5   79   33-119    43-121 (218)
138 2f8l_A Hypothetical protein LM  96.4   0.013 5.5E-07   36.1   7.4   87   24-113   117-211 (344)
139 2pxx_A Uncharacterized protein  96.4  0.0061 2.6E-07   38.2   5.7   72   34-108    40-112 (215)
140 1p91_A Ribosomal RNA large sub  96.3    0.01 4.4E-07   36.7   6.8   84   20-109    66-154 (269)
141 3frh_A 16S rRNA methylase; met  96.3   0.023 9.7E-07   34.5   8.3   88   31-124   100-187 (253)
142 1yzh_A TRNA (guanine-N(7)-)-me  96.3   0.019 8.1E-07   35.0   7.8   75   36-110    41-118 (214)
143 3gnl_A Uncharacterized protein  96.2   0.074 3.1E-06   31.3  11.3  102   24-130    11-117 (244)
144 1boo_A Protein (N-4 cytosine-s  96.2   0.014 5.9E-07   35.9   6.9   27   22-48     16-46  (323)
145 2gb4_A Thiopurine S-methyltran  96.2   0.025   1E-06   34.3   8.1   60   21-80     53-112 (252)
146 1qyr_A KSGA, high level kasuga  96.2   0.011 4.4E-07   36.7   6.2   75   21-96      6-80  (252)
147 3i9f_A Putative type 11 methyl  96.2  0.0039 1.6E-07   39.5   4.0   52   27-78      8-59  (170)
148 2pjd_A Ribosomal RNA small sub  96.2    0.01 4.3E-07   36.8   6.0   80   28-111   188-269 (343)
149 1x19_A CRTF-related protein; m  96.1   0.019 7.9E-07   35.1   7.2   68   25-93    179-250 (359)
150 1kpg_A CFA synthase;, cyclopro  96.1   0.045 1.9E-06   32.6   9.1   81   24-109    52-135 (287)
151 3dxy_A TRNA (guanine-N(7)-)-me  96.1   0.069 2.9E-06   31.4  10.0   75   35-109    33-111 (218)
152 3dli_A Methyltransferase; PSI-  96.0   0.045 1.9E-06   32.6   8.6   68   35-109    40-107 (240)
153 3e23_A Uncharacterized protein  95.9   0.045 1.9E-06   32.7   8.4   58   20-79     29-86  (211)
154 2zig_A TTHA0409, putative modi  95.9   0.042 1.7E-06   32.9   8.2   15   24-38     25-39  (297)
155 3p2e_A 16S rRNA methylase; met  95.9   0.019 7.9E-07   35.1   6.3   92   27-119    15-113 (225)
156 2gs9_A Hypothetical protein TT  95.9  0.0054 2.3E-07   38.6   3.5   82   34-125    34-115 (211)
157 1yub_A Ermam, rRNA methyltrans  95.8  0.0013 5.3E-08   42.7  -0.1   97   20-119    13-111 (245)
158 1eg2_A Modification methylase   95.8   0.036 1.5E-06   33.3   7.3   46   35-80    241-286 (319)
159 1xj5_A Spermidine synthase 1;   95.6   0.047   2E-06   32.5   7.4   79   32-112   117-203 (334)
160 2r3s_A Uncharacterized protein  95.6   0.035 1.5E-06   33.4   6.8   71   36-110   165-239 (335)
161 2fpo_A Methylase YHHF; structu  95.6    0.11 4.4E-06   30.2   9.2   90   24-114    40-133 (202)
162 2fyt_A Protein arginine N-meth  95.5   0.066 2.8E-06   31.6   8.0   80   32-114    60-142 (340)
163 1qzz_A RDMB, aclacinomycin-10-  95.5    0.08 3.3E-06   31.0   8.4   28  227-254   265-292 (374)
164 1uir_A Polyamine aminopropyltr  95.5   0.066 2.8E-06   31.6   7.9   95   14-112    58-160 (314)
165 3mcz_A O-methyltransferase; ad  95.4    0.06 2.5E-06   31.8   7.5   29  227-255   265-293 (352)
166 2okc_A Type I restriction enzy  95.3   0.029 1.2E-06   33.9   5.6   87   24-113   159-263 (445)
167 2vdv_E TRNA (guanine-N(7)-)-me  95.3   0.082 3.5E-06   31.0   7.9   77   34-110    47-135 (246)
168 2h1r_A Dimethyladenosine trans  95.3   0.052 2.2E-06   32.2   6.8   95   20-118    26-122 (299)
169 2jjq_A Uncharacterized RNA met  95.3    0.16 6.5E-06   29.2   9.2   56   22-80    279-334 (425)
170 2ih2_A Modification methylase   95.2   0.013 5.4E-07   36.2   3.3   82   23-115    26-110 (421)
171 2h00_A Methyltransferase 10 do  95.1   0.082 3.4E-06   31.0   7.4   90   24-113    51-150 (254)
172 1tw3_A COMT, carminomycin 4-O-  95.0   0.094   4E-06   30.6   7.5   30  227-256   266-295 (360)
173 3cc8_A Putative methyltransfer  95.0   0.038 1.6E-06   33.1   5.4   54   24-78     21-74  (230)
174 3c3y_A Pfomt, O-methyltransfer  94.8    0.23 9.9E-06   28.0   9.4   99   26-125    59-168 (237)
175 3g07_A 7SK snRNA methylphospha  94.8   0.059 2.5E-06   31.9   5.9   47   35-81     45-93  (292)
176 2a14_A Indolethylamine N-methy  94.7    0.03 1.3E-06   33.7   4.3   61   25-85     42-105 (263)
177 1sui_A Caffeoyl-COA O-methyltr  94.6    0.25 1.1E-05   27.8   8.8   81   36-116    79-169 (247)
178 3ckk_A TRNA (guanine-N(7)-)-me  94.5    0.13 5.7E-06   29.6   7.2   75   36-110    46-130 (235)
179 3bwc_A Spermidine synthase; SA  94.5    0.19   8E-06   28.6   7.9   94   15-112    77-178 (304)
180 2pt6_A Spermidine synthase; tr  94.4     0.2 8.3E-06   28.5   7.9   93   15-111    98-197 (321)
181 3i53_A O-methyltransferase; CO  94.4   0.064 2.7E-06   31.6   5.3   70   23-93    156-229 (332)
182 2ip2_A Probable phenazine-spec  94.4    0.11 4.6E-06   30.2   6.4   79   25-109   157-239 (334)
183 2b2c_A Spermidine synthase; be  94.3     0.3 1.3E-05   27.3   8.8   78   32-111   105-189 (314)
184 3ftd_A Dimethyladenosine trans  94.3    0.15 6.2E-06   29.3   7.0   91   20-114    15-106 (249)
185 3gwz_A MMCR; methyltransferase  94.2    0.32 1.3E-05   27.2   8.9   25  227-251   285-309 (369)
186 3gjy_A Spermidine synthase; AP  94.2    0.32 1.3E-05   27.2   9.7   76   36-111    89-167 (317)
187 2i7c_A Spermidine synthase; tr  94.2    0.24   1E-05   28.0   7.8   86   24-111    67-159 (283)
188 2ift_A Putative methylase HI07  94.0    0.35 1.5E-05   26.9   8.7   94   22-115    37-137 (201)
189 1or8_A Protein arginine N-meth  93.9    0.12 5.1E-06   29.9   6.0   76   33-111    54-132 (340)
190 2avd_A Catechol-O-methyltransf  93.9    0.36 1.5E-05   26.8   9.3   96   35-131    68-172 (229)
191 1vlm_A SAM-dependent methyltra  93.8   0.057 2.4E-06   32.0   4.1   79   20-110    31-109 (219)
192 1mjf_A Spermidine synthase; sp  93.8    0.38 1.6E-05   26.6   8.7   78   31-111    71-160 (281)
193 2qe6_A Uncharacterized protein  93.7    0.15 6.3E-06   29.3   6.1   76   25-101    65-146 (274)
194 3dp7_A SAM-dependent methyltra  93.6    0.39 1.6E-05   26.6   8.1   32  226-257   264-295 (363)
195 2o07_A Spermidine synthase; st  93.6    0.29 1.2E-05   27.4   7.4   94   15-112    77-177 (304)
196 3opn_A Putative hemolysin; str  93.4     0.1 4.3E-06   30.4   4.8   89   24-116    24-116 (232)
197 1iy9_A Spermidine synthase; ro  93.4    0.38 1.6E-05   26.6   7.7   94   14-111    56-156 (275)
198 1g6q_1 HnRNP arginine N-methyl  93.3    0.19 8.2E-06   28.5   6.1   78   33-113    35-115 (328)
199 2aot_A HMT, histamine N-methyl  93.0    0.51 2.1E-05   25.8   9.1   96   28-125    43-155 (292)
200 1inl_A Spermidine synthase; be  93.0    0.47   2E-05   26.0   7.7   80   31-112    86-172 (296)
201 3duw_A OMT, O-methyltransferas  92.9    0.53 2.2E-05   25.7  11.8   81   36-116    58-146 (223)
202 1ej0_A FTSJ; methyltransferase  92.8    0.54 2.3E-05   25.6  14.1   78   25-112    10-97  (180)
203 2i62_A Nicotinamide N-methyltr  92.8   0.084 3.5E-06   30.9   3.6   61   25-85     43-106 (265)
204 3b3j_A Histone-arginine methyl  92.7    0.41 1.7E-05   26.4   7.1   75   33-111   155-232 (480)
205 1i4w_A Mitochondrial replicati  92.5    0.59 2.5E-05   25.4   9.4   75   20-96     36-118 (353)
206 3b3f_A Histone-arginine methyl  92.5     0.5 2.1E-05   25.9   7.3   76   32-111    42-120 (341)
207 3adn_A Spermidine synthase; am  92.5    0.17 7.2E-06   28.9   5.0   94   14-111    64-165 (294)
208 2ixa_A Alpha-N-acetylgalactosa  91.6    0.64 2.7E-05   25.2   7.0   80   43-123    24-110 (444)
209 2hnk_A SAM-dependent O-methylt  91.2    0.82 3.5E-05   24.5   9.8   81   36-117    60-161 (239)
210 2ar0_A M.ecoki, type I restric  90.5    0.42 1.8E-05   26.4   5.2   90   24-114   157-272 (541)
211 3htx_A HEN1; HEN1, small RNA m  90.5    0.67 2.8E-05   25.1   6.2   55   26-80    711-768 (950)
212 3fut_A Dimethyladenosine trans  90.1       1 4.3E-05   23.9   8.5   95   20-118    31-127 (271)
213 3ctm_A Carbonyl reductase; alc  88.9    0.93 3.9E-05   24.2   6.0   96   17-114    15-122 (279)
214 3ldu_A Putative methylase; str  88.1     1.4 5.9E-05   23.0   8.8   58   19-78     16-84  (385)
215 1xxl_A YCGJ protein; structura  88.1    0.37 1.6E-05   26.7   3.5   41  226-266   101-141 (239)
216 3cbg_A O-methyltransferase; cy  87.9     1.5 6.2E-05   22.9   9.4   79   36-116    73-161 (232)
217 3dou_A Ribosomal RNA large sub  87.6     1.5 6.4E-05   22.8   7.1   78   25-112    13-100 (191)
218 2pxx_A Uncharacterized protein  86.7    0.49 2.1E-05   25.9   3.5   32  225-256   135-166 (215)
219 3khk_A Type I restriction-modi  86.4     1.8 7.4E-05   22.3   6.2   56   25-81    234-306 (544)
220 2jah_A Clavulanic acid dehydro  85.8     1.9 7.9E-05   22.2   7.2   72   44-115    13-96  (247)
221 2qfm_A Spermine synthase; sper  85.7     1.9 8.1E-05   22.1   9.1   40   40-79    192-232 (364)
222 3gcz_A Polyprotein; flavivirus  85.6    0.28 1.2E-05   27.5   1.8   88   24-115    78-168 (282)
223 2wa2_A Non-structural protein   85.5    0.36 1.5E-05   26.8   2.3   88   24-116    70-161 (276)
224 3cvo_A Methyltransferase-like   85.1     1.7 7.1E-05   22.5   5.6   72    1-81      2-74  (202)
225 3hp7_A Hemolysin, putative; st  84.2     1.7 7.2E-05   22.4   5.3   90   24-117    72-165 (291)
226 2edu_A Kinesin-like protein KI  83.1    0.45 1.9E-05   26.2   1.9   45  144-194    30-75  (98)
227 3i9f_A Putative type 11 methyl  81.5    0.63 2.6E-05   25.3   2.2   29  224-252    87-115 (170)
228 1yb1_A 17-beta-hydroxysteroid   80.7       3 0.00013   20.8   7.2   78   36-114    30-119 (272)
229 3giw_A Protein of unknown func  80.3     3.1 0.00013   20.8   6.4   77   25-101    66-149 (277)
230 1zem_A Xylitol dehydrogenase;   80.0     3.2 0.00013   20.7   8.3   71   44-114    13-95  (262)
231 3lkd_A Type I restriction-modi  79.8     3.2 0.00014   20.7   6.4   82   33-114   218-308 (542)
232 3iht_A S-adenosyl-L-methionine  79.6     3.3 0.00014   20.6   6.0   85   24-115    29-118 (174)
233 3imf_A Short chain dehydrogena  79.4     3.3 0.00014   20.6   7.8   72   43-114    11-94  (257)
234 2dul_A N(2),N(2)-dimethylguano  79.1     3.4 0.00014   20.5  10.4   96   35-133    46-160 (378)
235 3lst_A CALO1 methyltransferase  78.9     1.8 7.4E-05   22.4   3.8   26  226-251   263-288 (348)
236 2px2_A Genome polyprotein [con  78.9     0.5 2.1E-05   25.9   0.9   88   24-115    61-151 (269)
237 2oxt_A Nucleoside-2'-O-methylt  78.4     2.3 9.5E-05   21.7   4.2  134   24-165    62-206 (265)
238 3evf_A RNA-directed RNA polyme  77.8    0.34 1.4E-05   27.0  -0.2   43   25-67     63-111 (277)
239 2cmg_A Spermidine synthase; tr  77.6     0.4 1.7E-05   26.5   0.2   76   31-110    68-146 (262)
240 3ftp_A 3-oxoacyl-[acyl-carrier  77.3     3.8 0.00016   20.2   7.6   78   36-114    27-116 (270)
241 1geg_A Acetoin reductase; SDR   75.8     4.2 0.00018   19.9   7.3   71   44-114     8-90  (256)
242 3k0b_A Predicted N6-adenine-sp  75.3     4.3 0.00018   19.8   8.2   61   16-78     21-91  (393)
243 2rhc_B Actinorhodin polyketide  74.9     4.4 0.00019   19.8   7.2   77   36-114    21-110 (277)
244 1o9g_A RRNA methyltransferase;  74.4     4.6 0.00019   19.7   6.8   61   20-80     30-99  (250)
245 2ae2_A Protein (tropinone redu  69.9     5.8 0.00024   19.0   5.6   72   43-114    14-98  (260)
246 2zfu_A Nucleomethylin, cerebra  69.3     2.6 0.00011   21.3   2.7   26  227-252   129-154 (215)
247 3eld_A Methyltransferase; flav  69.0    0.79 3.3E-05   24.6  -0.1   43   24-66     69-117 (300)
248 2p41_A Type II methyltransfera  68.9     3.3 0.00014   20.6   3.1   42   25-66     71-114 (305)
249 3c1a_A Putative oxidoreductase  68.7     4.7  0.0002   19.6   3.9   67   49-127    24-92  (315)
250 3lkz_A Non-structural protein   67.5       3 0.00012   20.9   2.6   86   24-117    82-174 (321)
251 3ip3_A Oxidoreductase, putativ  67.5     2.3 9.8E-05   21.6   2.1   73   43-123     6-86  (337)
252 3h7a_A Short chain dehydrogena  67.0     6.6 0.00028   18.6   6.7   81   34-114     5-94  (252)
253 2yui_A Anamorsin; cytokine-ind  66.1     2.9 0.00012   20.9   2.4   24  229-252    84-107 (182)
254 3ndi_A Methyltransferase; S-ad  66.0     6.9 0.00029   18.5   7.0   62   16-77     87-148 (416)
255 3dhn_A NAD-dependent epimerase  62.9     7.6 0.00032   18.2   4.0   64   44-114    13-78  (227)
256 2bm8_A Cephalosporin hydroxyla  62.8       7 0.00029   18.5   3.8   85   23-114    71-163 (236)
257 3ec7_A Putative dehydrogenase;  61.7     8.2 0.00035   18.0   4.8   78   49-134    37-121 (357)
258 1db3_A GDP-mannose 4,6-dehydra  61.6     8.3 0.00035   18.0   5.6   66   50-115    16-90  (372)
259 1ae1_A Tropinone reductase-I;   61.0     8.5 0.00036   17.9   5.8   77   36-113    20-109 (273)
260 3m1a_A Putative dehydrogenase;  59.7     8.9 0.00038   17.8   6.0   69   43-114    10-90  (281)
261 2py6_A Methyltransferase FKBM;  59.4       9 0.00038   17.8   7.0   29  153-182   171-199 (409)
262 2zat_A Dehydrogenase/reductase  59.2     9.1 0.00038   17.7   8.1   80   34-114    11-102 (260)
263 2c07_A 3-oxoacyl-(acyl-carrier  58.4     9.4 0.00039   17.7   7.8   78   36-114    43-132 (285)
264 2duy_A Competence protein come  57.7     1.4   6E-05   22.9  -0.5   38  148-194    21-58  (75)
265 1rpn_A GDP-mannose 4,6-dehydra  54.8      11 0.00045   17.3   3.9   80   38-119    16-102 (335)
266 1udb_A Epimerase, UDP-galactos  54.7      11 0.00045   17.3   4.0   79   52-130    18-102 (338)
267 2z1m_A GDP-D-mannose dehydrata  54.3      11 0.00046   17.2   5.6   76   39-116     6-88  (345)
268 1h6d_A Precursor form of gluco  54.2      11 0.00046   17.2   5.2   88   43-135    87-185 (433)
269 2plw_A Ribosomal RNA methyltra  53.5      11 0.00047   17.2   8.0   44   25-68     10-58  (201)
270 2p2s_A Putative oxidoreductase  53.4      10 0.00043   17.4   3.3   78   49-135    15-101 (336)
271 3lyl_A 3-oxoacyl-(acyl-carrier  52.0      12  0.0005   17.0   8.1   71   44-114    11-93  (247)
272 3k6g_A Telomeric repeat-bindin  51.1       7 0.00029   18.5   2.2   30  145-174    66-95  (111)
273 1fmc_A 7 alpha-hydroxysteroid   50.7      12 0.00052   16.9   8.1   72   43-114    16-99  (255)
274 3gaf_A 7-alpha-hydroxysteroid   50.7      12 0.00052   16.9   8.1   77   36-114    11-100 (256)
275 1t2a_A GDP-mannose 4,6 dehydra  49.4      12 0.00052   16.9   3.3   85   30-114    17-113 (375)
276 3h5i_A Response regulator/sens  49.3      13 0.00055   16.7   7.0   68   58-125     5-76  (140)
277 1hdo_A Biliverdin IX beta redu  47.9      14 0.00058   16.6   4.0   67   41-113     9-77  (206)
278 3cxt_A Dehydrogenase with diff  47.5      14 0.00059   16.6   8.7   78   36-114    33-122 (291)
279 2b4a_A BH3024; 10175646, struc  45.7      15 0.00062   16.4   6.8   65   59-123    16-83  (138)
280 2nut_A Protein transport prote  45.6      15 0.00063   16.4   3.9   20  144-163   514-533 (769)
281 1xkq_A Short-chain reductase f  44.7      15 0.00065   16.3   7.9   73   43-115    11-98  (280)
282 2b4q_A Rhamnolipids biosynthes  44.3      16 0.00066   16.2   7.1   77   36-114    28-116 (276)
283 2j48_A Two-component sensor ki  43.0      16 0.00069   16.1   6.1   66   58-124     1-69  (119)
284 3ggo_A Prephenate dehydrogenas  42.5      17  0.0007   16.1   7.7   70   46-115    42-131 (314)
285 1f0y_A HCDH, L-3-hydroxyacyl-C  41.8      17 0.00072   16.0   3.3   31   50-80     30-60  (302)
286 1xg5_A ARPG836; short chain de  41.4      17 0.00073   15.9   7.1   78   36-114    31-122 (279)
287 3n74_A 3-ketoacyl-(acyl-carrie  40.7      18 0.00074   15.9   7.6   75   36-114     8-94  (261)
288 3m2t_A Probable dehydrogenase;  40.5      18 0.00075   15.9   4.1   76   50-134    21-102 (359)
289 2dpo_A L-gulonate 3-dehydrogen  40.5      18 0.00075   15.9   3.2   31   49-79     18-50  (319)
290 1vl8_A Gluconate 5-dehydrogena  40.4      18 0.00075   15.8   7.0   89   19-114     8-110 (267)
291 2o3f_A Putative HTH-type trans  40.0      18 0.00076   15.8   4.4   74  149-226     2-80  (111)
292 3cea_A MYO-inositol 2-dehydrog  39.6      18 0.00077   15.8   4.6   61   45-113    14-81  (346)
293 1h5q_A NADP-dependent mannitol  38.9      19 0.00079   15.7   5.2   75   40-114    16-103 (265)
294 1nff_A Putative oxidoreductase  38.8      19  0.0008   15.7   6.5   68   44-114    13-92  (260)
295 1wma_A Carbonyl reductase [NAD  37.8      20 0.00082   15.6   6.9   72   44-115    10-94  (276)
296 1xhl_A Short-chain dehydrogena  37.5      20 0.00083   15.6   7.7   93   20-114    10-117 (297)
297 1s5l_U Photosystem II 12 kDa e  37.0     3.5 0.00015   20.5  -1.2   39  147-194    56-94  (134)
298 3o38_A Short chain dehydrogena  35.7      21 0.00089   15.4   7.3   78   36-115    21-113 (266)
299 2bgk_A Rhizome secoisolaricire  35.7      21 0.00089   15.4   7.0   77   36-114    15-103 (278)
300 3bz1_U Photosystem II 12 kDa e  35.0     4.5 0.00019   19.7  -0.8   38  148-194    27-64  (104)
301 2i5h_A Hypothetical protein AF  34.8      22 0.00092   15.3   2.7   27  169-195   141-167 (205)
302 1xq1_A Putative tropinone redu  34.4      22 0.00093   15.2   7.5   78   36-114    13-103 (266)
303 3o7i_A OHCU decarboxylase; lya  34.4      22 0.00093   15.2   4.8   51  144-200    26-76  (189)
304 1spx_A Short-chain reductase f  34.3      22 0.00094   15.2   7.8   73   43-115    11-98  (278)
305 3ioy_A Short-chain dehydrogena  33.9      23 0.00095   15.2   6.7   72   43-114    13-98  (319)
306 3mog_A Probable 3-hydroxybutyr  33.5      23 0.00096   15.2   3.2   32   49-80     17-50  (483)
307 3lls_A 3-ketoacyl-(acyl-carrie  33.4     7.8 0.00033   18.2   0.2   12   57-68    257-268 (475)
308 3cg0_A Response regulator rece  33.4      23 0.00097   15.1   6.5   56   58-113     9-64  (140)
309 2gdz_A NAD+-dependent 15-hydro  32.8      24 0.00099   15.1   7.2   73   43-115    12-98  (267)
310 2qr3_A Two-component system re  32.0      24   0.001   15.0   6.8   55   58-113     3-57  (140)
311 2glx_A 1,5-anhydro-D-fructose   31.7      25   0.001   15.0   5.2   80   45-133     6-95  (332)
312 3cg4_A Response regulator rece  31.5      25   0.001   14.9   6.9   57   57-114     6-62  (142)
313 1k2w_A Sorbitol dehydrogenase;  31.3      25   0.001   14.9   6.3   68   44-114    11-90  (256)
314 1iy8_A Levodione reductase; ox  31.0      25  0.0011   14.9   7.0   78   36-114    12-103 (267)
315 2nwq_A Probable short-chain de  30.7      25  0.0011   14.9   7.9   75   39-114    24-108 (272)
316 1zg3_A Isoflavanone 4'-O-methy  30.5      26  0.0011   14.8   3.4   36  225-260   266-307 (358)
317 3js3_A 3-dehydroquinate dehydr  30.4      18 0.00074   15.9   1.6   26   65-90     28-54  (258)
318 2qq5_A DHRS1, dehydrogenase/re  30.1      26  0.0011   14.8   9.7   86   34-120     2-100 (260)
319 1rkx_A CDP-glucose-4,6-dehydra  30.0      26  0.0011   14.8   3.5   76   38-114    11-91  (357)
320 2wsb_A Galactitol dehydrogenas  29.9      26  0.0011   14.8   7.4   76   36-114    10-96  (254)
321 1s8n_A Putative antiterminator  29.4      27  0.0011   14.7   6.8   55   60-114    15-69  (205)
322 1m2o_A SEC23, protein transpor  29.3      27  0.0011   14.7   3.9   21  144-164   516-536 (768)
323 3g89_A Ribosomal RNA small sub  28.8      27  0.0012   14.7   8.7   29  224-252   159-187 (249)
324 2d9o_A DNAJ (HSP40) homolog, s  28.8      19 0.00079   15.7   1.5   20  149-168    27-46  (100)
325 1kjq_A GART 2, phosphoribosylg  28.8      27  0.0012   14.7   2.5   64   45-114    17-85  (391)
326 1nri_A Hypothetical protein HI  28.8      27  0.0012   14.7   3.4   26  141-166   207-232 (306)
327 1z45_A GAL10 bifunctional prot  28.6      28  0.0012   14.6   4.1   69   38-109    13-90  (699)
328 2rdm_A Response regulator rece  28.1      28  0.0012   14.6   6.9   66   58-123     5-74  (132)
329 1zcj_A Peroxisomal bifunctiona  28.0      28  0.0012   14.6   3.1   31   49-79     49-81  (463)
330 2cfc_A 2-(R)-hydroxypropyl-COM  28.0      28  0.0012   14.6   6.6   72   44-115     8-92  (250)
331 2pd4_A Enoyl-[acyl-carrier-pro  27.7      29  0.0012   14.5   6.9   65   49-114    23-95  (275)
332 1xhf_A DYE resistance, aerobic  27.5      29  0.0012   14.5   6.3   56   58-114     3-58  (123)
333 3guy_A Short-chain dehydrogena  27.3      29  0.0012   14.5   6.2   60   51-113    18-82  (230)
334 3mz0_A Inositol 2-dehydrogenas  27.3      29  0.0012   14.5   5.8   73   45-125     8-87  (344)
335 3evn_A Oxidoreductase, GFO/IDH  27.1      27  0.0011   14.7   2.0   76   50-134    20-101 (329)
336 3nyw_A Putative oxidoreductase  27.0      30  0.0012   14.4   6.7   72   43-114    12-98  (250)
337 2pnf_A 3-oxoacyl-[acyl-carrier  26.9      30  0.0012   14.4   7.8   78   36-114     6-96  (248)
338 3bfp_A Acetyltransferase; LEFT  26.2      30  0.0013   14.4   2.2   23   45-67      9-35  (194)
339 1qkk_A DCTD, C4-dicarboxylate   26.2      30  0.0013   14.4   6.2   57   57-114     2-58  (155)
340 1w6u_A 2,4-dienoyl-COA reducta  25.7      31  0.0013   14.3   7.6   78   36-114    25-115 (302)
341 2rh8_A Anthocyanidin reductase  25.3      23 0.00098   15.1   1.4   80   38-117    11-94  (338)
342 2dwc_A PH0318, 433AA long hypo  25.2      32  0.0013   14.2   5.5   64   45-114    25-93  (433)
343 1yxm_A Pecra, peroxisomal tran  25.1      32  0.0013   14.2   7.2   71   44-114    24-111 (303)
344 1id1_A Putative potassium chan  24.9      32  0.0014   14.2   7.3   66   45-112     9-80  (153)
345 2qzj_A Two-component response   24.6      33  0.0014   14.2   6.2   57   58-115     4-60  (136)
346 3hdv_A Response regulator; PSI  24.5      33  0.0014   14.2   6.9   59   56-114     5-63  (136)
347 3gvc_A Oxidoreductase, probabl  24.4      33  0.0014   14.1   7.1   75   36-114    28-114 (277)
348 2rjn_A Response regulator rece  24.4      33  0.0014   14.1   6.3   54   60-114     9-62  (154)
349 1ja9_A 4HNR, 1,3,6,8-tetrahydr  24.3      33  0.0014   14.1   6.9   79   35-114    19-110 (274)
350 2hwk_A Helicase NSP2; rossman   24.0      33  0.0014   14.1   2.3   39  227-266   232-270 (320)
351 2g72_A Phenylethanolamine N-me  23.9      34  0.0014   14.1   4.6   29  222-250   188-216 (289)
352 2c29_D Dihydroflavonol 4-reduc  23.3      35  0.0015   14.0   3.5   57   39-95      8-68  (337)
353 3hv2_A Response regulator/HD d  22.8      35  0.0015   13.9   6.9   56   57-113    13-68  (153)
354 2hq1_A Glucose/ribitol dehydro  22.6      36  0.0015   13.9   6.0   73   43-115    10-95  (247)
355 3e18_A Oxidoreductase; dehydro  22.6      36  0.0015   13.9   4.3   78   46-134    12-99  (359)
356 3l6e_A Oxidoreductase, short-c  22.5      36  0.0015   13.9   7.2   61   51-114    20-88  (235)
357 1zej_A HBD-9, 3-hydroxyacyl-CO  22.0      36  0.0015   13.8   2.9   40   49-88     24-65  (293)
358 1bdb_A CIS-biphenyl-2,3-dihydr  21.9      37  0.0015   13.8   6.8   68   44-114    11-90  (277)
359 2vha_A Periplasmic binding tra  21.8     4.4 0.00018   19.8  -2.8  193   56-264    34-249 (287)
360 2a4k_A 3-oxoacyl-[acyl carrier  21.6      37  0.0016   13.8   6.1   68   44-114    12-91  (263)
361 3i1j_A Oxidoreductase, short c  21.4      38  0.0016   13.8   7.8   78   36-114    13-105 (247)
362 3db2_A Putative NADPH-dependen  20.8      39  0.0016   13.7   5.2   81   44-134    10-100 (354)
363 3mwd_B ATP-citrate synthase; A  20.8     5.1 0.00022   19.4  -2.6  125  115-246   185-325 (334)
364 1vjk_A Molybdopterin convertin  20.8      16 0.00066   16.2  -0.2   58  186-250    37-94  (98)
365 2d8n_A Recoverin; structural g  20.6      39  0.0016   13.7   6.3  114  151-267    51-168 (207)
366 3o1n_A 3-dehydroquinate dehydr  20.5      35  0.0015   14.0   1.6   29   64-92     47-76  (276)
367 2cq2_A Hypothetical protein LO  20.2      40  0.0017   13.6   1.9   24  146-169    34-57  (114)
368 1yde_A Retinal dehydrogenase/r  20.2      40  0.0017   13.6   7.1   74   36-114     8-93  (270)

No 1  
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=100.00  E-value=0  Score=784.44  Aligned_cols=278  Identities=45%  Similarity=0.706  Sum_probs=264.5

Q ss_pred             CCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHH
Q ss_conf             78334009868866083888889983768828899999748909998099899999999852148852771132788987
Q gi|255764511|r   18 GDHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQD   97 (341)
Q Consensus        18 ~~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~   97 (341)
                      ..|+|||++||+++|.++++|+|||||||+||||++||+++++|||||+||+|+..|+++   +.+++.+++.+|+++.+
T Consensus         4 ~~H~PVLl~Evl~~L~~~~~g~~iD~T~G~GGHS~~iL~~~~~liaiDrD~~Ai~~a~~~---~~~~~~~~~~~f~~~~~   80 (285)
T 1wg8_A            4 MTHVPVLYQEALDLLAVRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKGL---HLPGLTVVQGNFRHLKR   80 (285)
T ss_dssp             CCCCCTTHHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHT---CCTTEEEEESCGGGHHH
T ss_pred             CCCCCCCHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHC---CCCCCEEEEEEHHHHHH
T ss_conf             986762199999727858999999948898299999995799389998988999986640---44431688630012178


Q ss_pred             HHHH---CCCCEEEEECCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             6531---2332478622520788876540734456641010435568418999862225789989997446302688999
Q gi|255764511|r   98 YVPD---KGVDGVVFDLGVSSMQIDCGDRGFSFQKSGPLDMRMSCSGISASDVVNQANVKDLTRILGILGEEKQASRIAH  174 (341)
Q Consensus        98 ~l~~---~~vdgIl~DLGvSS~Qld~~~RGFSf~~dgpLDMRmd~~~~tA~eiln~~s~~~L~~i~~~yGee~~a~~IA~  174 (341)
                      ++..   .+|||||+||||||+|||+++|||||+.|||||||||+++.+|+||||+|++++|++||++||||++|++||+
T Consensus        81 ~l~~~~~~~vdgIL~DLGvSS~QlD~~~RGFSF~~dgpLDMRMd~~~~~A~~iln~~~e~~L~~i~~~yGEe~~a~~IA~  160 (285)
T 1wg8_A           81 HLAALGVERVDGILADLGVSSFHLDDPSRGFSYQKEGPLDMRMGLEGPTAKEVVNRLPLEALARLLRELGEEPQAYRIAR  160 (285)
T ss_dssp             HHHHTTCSCEEEEEEECSCCHHHHHCGGGCCCSSSCCBSCCCSSSCSCCHHHHHHHSCHHHHHHHHHHHHCCTTHHHHHH
T ss_pred             HHHHCCCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf             89864976577899705658275547755761267786776530148779999985408999999999467358899999


Q ss_pred             HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCH
Q ss_conf             99999752124321379999998876431277125788888876651340578999999885202445338998725502
Q gi|255764511|r  175 AIVKRRQSAPFQTTQDLSSLIQKTVYFSKNNRIHPATRSFQALRIFVNNEIEELAQGLRSAEKALKAGGLLIVVSFHSLE  254 (341)
Q Consensus       175 ~Iv~~R~~~~i~TT~eL~~iI~~~~~~~~~~k~hpatr~FQALRI~VN~El~~L~~~L~~~~~~L~~gGrl~VISFHSLE  254 (341)
                      +||++|+.++|.||.+|+++|..+++.  +.++||||||||||||+||+||++|+.+|.+++++|+||||||||||||||
T Consensus       161 ~Iv~~R~~~~~~tt~~L~~~i~~~~~~--~~~~~patr~FQALRI~VN~EL~~L~~~L~~~~~~L~~gGrl~VISFHSLE  238 (285)
T 1wg8_A          161 AIVAAREKAPIETTTQLAEIVRKAVGF--RRAGHPARKTFQALRIYVNDELNALKEFLEQAAEVLAPGGRLVVIAFHSLE  238 (285)
T ss_dssp             HHHHHHHHSCCCBHHHHHHHHHHHHCC--CSSSCTTHHHHHHHHHHHTTHHHHHHHHHHHHHHHEEEEEEEEEEECSHHH
T ss_pred             HHHHHHHCCCCCCHHHHHHHHHHHHHH--CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHH
T ss_conf             999987437642048888888887641--357883677888888862761899999999999863679679999717289


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHCCCCCEEEEEEEEECC
Q ss_conf             3899999986417887776567787777540452486547888999828710012323778717
Q gi|255764511|r  255 DRLVKKFFASRSGKVMAVRHMIPSNAHPAVFQSITKKVVVPTQEDVAFNRRSRSAKLRAGMRTV  318 (341)
Q Consensus       255 DRiVK~ff~~~~~~~~~~~~~~~~~~~~~~~~~l~kkpi~PS~~Ei~~NpRSRSAKLRv~~k~~  318 (341)
                      |||||+||+.++                  |++++||||+||++||+.|||||||||||++|++
T Consensus       239 DRiVK~~fk~~~------------------~~~~~kkpi~ps~~Ei~~NpRsRSAkLRv~~k~~  284 (285)
T 1wg8_A          239 DRVVKRFLRESG------------------LKVLTKKPLVPSEKEAAQNPRARSAKLRAAEKEA  284 (285)
T ss_dssp             HHHHHHHHHHHC------------------SEESCSSCBCCCHHHHHHCGGGGGCEEEEEECCC
T ss_pred             HHHHHHHHHHCC------------------CCCCCCCCCCCCHHHHHHCCCCHHEEEEEEEEEC
T ss_conf             999999997365------------------2002599948899999758962510322899707


No 2  
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=100.00  E-value=0  Score=774.81  Aligned_cols=288  Identities=39%  Similarity=0.654  Sum_probs=268.3

Q ss_pred             HCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH--CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf             011607833400986886608388888998376882889999974--890999809989999999985214885277113
Q gi|255764511|r   13 IHHTIGDHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM--GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQA   90 (341)
Q Consensus        13 ~~~~~~~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~--~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~   90 (341)
                      |.....+|+|||++||+++|.++++|+|||||||+||||.+||++  +++|||||+||+|+..|++++..|++|+.+++.
T Consensus         3 ~~~~~~~H~PVll~Evl~~L~~~~~g~~vD~T~G~GGHs~~iL~~~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~   82 (301)
T 1m6y_A            3 MRKYSQRHIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKV   82 (301)
T ss_dssp             -CCSCSSCCCTTHHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEEC
T ss_pred             CCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             66456782634199999836838999999918897199999997399984999838889999999876412431000012


Q ss_pred             CHHHHHHHHHH---CCCCEEEEECCCHHHHHHHHHHCCCCCCCCCEECCCCCC-CCCHHHHHHHCCHHHHHHHHHHHCCC
Q ss_conf             27889876531---233247862252078887654073445664101043556-84189998622257899899974463
Q gi|255764511|r   91 TFSQLQDYVPD---KGVDGVVFDLGVSSMQIDCGDRGFSFQKSGPLDMRMSCS-GISASDVVNQANVKDLTRILGILGEE  166 (341)
Q Consensus        91 ~F~~i~~~l~~---~~vdgIl~DLGvSS~Qld~~~RGFSf~~dgpLDMRmd~~-~~tA~eiln~~s~~~L~~i~~~yGee  166 (341)
                      +|++++.++..   .+|||||+||||||+|||+++|||||+.|||||||||++ ++||+||||+||+++|++||++||||
T Consensus        83 ~f~~l~~~~~~~~~~~vdgIL~DLGvSS~Qld~~~RGFSF~~dgpLDMRmd~~~~~tA~diln~~se~eL~~I~~~yG~E  162 (301)
T 1m6y_A           83 SYREADFLLKTLGIEKVDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMDLESEVTAQKVLNELPEEELARIIFEYGEE  162 (301)
T ss_dssp             CGGGHHHHHHHTTCSCEEEEEEECSCCHHHHHTSCSCSSSSSCCBSCCCSSTTSSCCHHHHHHHSCHHHHHHHHHHTTCC
T ss_pred             CCCHHHHHHHHCCCCCCCEEEECCCCCHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCC
T ss_conf             32116889987187757779962888978896427884025688844575565655799998618999999999980853


Q ss_pred             C-HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH--HHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf             0-2688999999997521243213799999988764--312771257888888766513405789999998852024453
Q gi|255764511|r  167 K-QASRIAHAIVKRRQSAPFQTTQDLSSLIQKTVYF--SKNNRIHPATRSFQALRIFVNNEIEELAQGLRSAEKALKAGG  243 (341)
Q Consensus       167 ~-~a~~IA~~Iv~~R~~~~i~TT~eL~~iI~~~~~~--~~~~k~hpatr~FQALRI~VN~El~~L~~~L~~~~~~L~~gG  243 (341)
                      + +|++||++||++|   ++.+|.+|+++|..+++.  .++.++||||||||||||+||+||++|+.+|.+++++|+|||
T Consensus       163 ~r~a~~IA~~Iv~~R---~~~~t~~~~~~i~~~~~~~~~~~~~~hpatr~FQALRI~VN~EL~~L~~~L~~~~~~L~~gG  239 (301)
T 1m6y_A          163 KRFARRIARKIVENR---PLNTTLDLVKAVREALPSYEIRRRKRHFATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGG  239 (301)
T ss_dssp             TTTHHHHHHHHHHTC---SCCBHHHHHHHHHHHSCHHHHHHCSSCTTHHHHHHHHHHHHTHHHHHHHHHHHGGGGEEEEE
T ss_pred             HHHHHHHHHHHHHCC---CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
T ss_conf             899999999998623---43530466766655421121002466445799999999973309999999999999827996


Q ss_pred             EEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCC
Q ss_conf             38998725502389999998641788777656778777754045248654788899982871001232377871785
Q gi|255764511|r  244 LLIVVSFHSLEDRLVKKFFASRSGKVMAVRHMIPSNAHPAVFQSITKKVVVPTQEDVAFNRRSRSAKLRAGMRTVER  320 (341)
Q Consensus       244 rl~VISFHSLEDRiVK~ff~~~~~~~~~~~~~~~~~~~~~~~~~l~kkpi~PS~~Ei~~NpRSRSAKLRv~~k~~~~  320 (341)
                      ||||||||||||||||+||+.++                 .+++++||||+||++||+.|||||||||||++|+.+.
T Consensus       240 rl~vISfHSLEDRiVK~~f~~~~-----------------~~~~~~kkpi~ps~~Ei~~NpRsRSAkLRv~~ki~~~  299 (301)
T 1m6y_A          240 RIVVISFHSLEDRIVKETFRNSK-----------------KLRILTEKPVRPSEEEIRENPRARSGRLRAAERIEEG  299 (301)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHCS-----------------SEEESCSSCBCCCHHHHHHCGGGTTCEEEEEEEC---
T ss_pred             EEEEEECCCHHHHHHHHHHHCCC-----------------CCCCCCCCCCCCCHHHHHHCCCHHHHHHHEEEECCCC
T ss_conf             89999638489999999986263-----------------1365779894979999975985474122225771578


No 3  
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus}
Probab=98.65  E-value=1.4e-07  Score=68.14  Aligned_cols=89  Identities=21%  Similarity=0.355  Sum_probs=71.6

Q ss_pred             HHHHHHHHHCC--CCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHH
Q ss_conf             09868866083--888889983768828899999748909998099899999999852148-852771132788987653
Q gi|255764511|r   24 LLEKVIALLNP--APGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVP  100 (341)
Q Consensus        24 ll~Evl~~l~~--~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~  100 (341)
                      +++..-+++..  .+|.+++|+..|.|+.|..+-+..++|+|+|.+++|++.|+++.+..+ +++.++++++.++..++.
T Consensus         8 ~~~~~~~~l~~~l~~~~~VLD~gcG~G~~t~~LA~~~~~V~aiDis~~al~~a~~n~~~~~l~nv~~~~~~~~~l~~~~~   87 (185)
T 3mti_A            8 PIHMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVR   87 (185)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCC
T ss_pred             HHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCC
T ss_conf             79999999996589999999996388899999982699899758987888789999998299848999936777555135


Q ss_pred             HCCCCEEEEECCC
Q ss_conf             1233247862252
Q gi|255764511|r  101 DKGVDGVVFDLGV  113 (341)
Q Consensus       101 ~~~vdgIl~DLGv  113 (341)
                       ..++.+++|+.+
T Consensus        88 -~~~~~v~~~~~~   99 (185)
T 3mti_A           88 -EPIRAAIFNLGY   99 (185)
T ss_dssp             -SCEEEEEEEEC-
T ss_pred             -CCCCEEEEECCC
T ss_conf             -666569995265


No 4  
>1vl5_A Unknown conserved protein BH2331; 10174951, hypothetical protein, structural genomics, JCSG, protein structure initiative, PSI; HET: MSE; 1.95A {Bacillus halodurans c-125} SCOP: c.66.1.41
Probab=98.62  E-value=7.4e-07  Score=63.58  Aligned_cols=98  Identities=15%  Similarity=0.188  Sum_probs=81.9

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHHHC
Q ss_conf             09868866083888889983768828899999748909998099899999999852148-85277113278898765312
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVPDK  102 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~~~  102 (341)
                      =+..+++.+.++++..++|.=.|.|+.+..+.+.+++|+|+|..+.++..|+++++..+ +++.++.+++.++.  +...
T Consensus        25 ~~~~l~~~~~l~~~~~VLDiGcG~G~~~~~la~~~~~v~g~D~s~~~~~~a~~~~~~~g~~~i~~~~~d~~~l~--~~~~  102 (260)
T 1vl5_A           25 DLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP--FTDE  102 (260)
T ss_dssp             CHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC--SCTT
T ss_pred             HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCCCCEEEECCCCCCC--CCCC
T ss_conf             99999996089992999995464719999999729969999899999998661222245665247751123578--7778


Q ss_pred             CCCEEEEECCCHHHHHHHHHHCC
Q ss_conf             33247862252078887654073
Q gi|255764511|r  103 GVDGVVFDLGVSSMQIDCGDRGF  125 (341)
Q Consensus       103 ~vdgIl~DLGvSS~Qld~~~RGF  125 (341)
                      .+|.|+.-.  +.++++|++..|
T Consensus       103 sfD~V~~~~--~l~h~~d~~~~l  123 (260)
T 1vl5_A          103 RFHIVTCRI--AAHHFPNPASFV  123 (260)
T ss_dssp             CEEEEEEES--CGGGCSCHHHHH
T ss_pred             CEEEEEEEC--CHHHCCCHHHHH
T ss_conf             557998702--255268999999


No 5  
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.61  E-value=2e-06  Score=60.83  Aligned_cols=86  Identities=12%  Similarity=0.140  Sum_probs=70.4

Q ss_pred             HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCC---CCEEEECCCHHHHHHHHHH
Q ss_conf             9868866083888889983768828899999748909998099899999999852148---8527711327889876531
Q gi|255764511|r   25 LEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYK---EQFSLFQATFSQLQDYVPD  101 (341)
Q Consensus        25 l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~---~r~~~~~~~F~~i~~~l~~  101 (341)
                      -+=.++.+.+.+++.++|.-.|.|..+.++.+..++++|+|.|++|+..|+++.+..+   .++.++++++-+   .++.
T Consensus        41 t~~Ll~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~iDis~~~i~~a~~n~~~~~l~~~~i~~~~~D~~~---~~~~  117 (194)
T 1dus_A           41 TKILVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE---NVKD  117 (194)
T ss_dssp             HHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT---TCTT
T ss_pred             HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCHHH---HCCC
T ss_conf             9999982898899949995696429999999738847998263678899999999819998619999873676---3356


Q ss_pred             CCCCEEEEECCC
Q ss_conf             233247862252
Q gi|255764511|r  102 KGVDGVVFDLGV  113 (341)
Q Consensus       102 ~~vdgIl~DLGv  113 (341)
                      ..+|.|+.+..+
T Consensus       118 ~~fD~Ii~~~~~  129 (194)
T 1dus_A          118 RKYNKIITNPPI  129 (194)
T ss_dssp             SCEEEEEECCCS
T ss_pred             CCCCEEEECCCH
T ss_conf             774399999522


No 6  
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics, protein structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.43  E-value=1.2e-06  Score=62.25  Aligned_cols=85  Identities=20%  Similarity=0.393  Sum_probs=70.5

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHHHH
Q ss_conf             0986886608388888998376882889999974---890999809989999999985214--88527711327889876
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQDY   98 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~~~   98 (341)
                      ++.+.     ++||.+++|+..|.|+.|..+++.   .++|+|+|.++++++.|+++.++.  .+++.++++++.++...
T Consensus        15 ~l~~~-----ik~G~~VLDlGcG~G~~t~~la~~~~~~~~V~giDis~~~l~~ar~~~~~~g~~~~v~~~~~d~~~~~~~   89 (197)
T 3eey_A           15 YIKMF-----VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKY   89 (197)
T ss_dssp             HHHHH-----CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGT
T ss_pred             HHHHH-----CCCCCEEEEEEEECCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHC
T ss_conf             99985-----8999999999204889999999983898199999738899899999999839987789998586760121


Q ss_pred             HHHCCCCEEEEECCCH
Q ss_conf             5312332478622520
Q gi|255764511|r   99 VPDKGVDGVVFDLGVS  114 (341)
Q Consensus        99 l~~~~vdgIl~DLGvS  114 (341)
                      .+ ..++.+.+|+|+.
T Consensus        90 ~~-~~~~~~~~~~~~~  104 (197)
T 3eey_A           90 ID-CPVKAVMFNLGYL  104 (197)
T ss_dssp             CC-SCEEEEEEEESBC
T ss_pred             CC-CCCCEEEEEEEEC
T ss_conf             57-7643046525532


No 7  
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural genomics consortium, SGC; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.41  E-value=8.4e-07  Score=63.20  Aligned_cols=88  Identities=17%  Similarity=0.357  Sum_probs=70.6

Q ss_pred             HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHC------------CCCEEEEC
Q ss_conf             986886608388888998376882889999974---890999809989999999985214------------88527711
Q gi|255764511|r   25 LEKVIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDY------------KEQFSLFQ   89 (341)
Q Consensus        25 l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~------------~~r~~~~~   89 (341)
                      ..-++..+++.||..++|+-.|.|.-|.++...   .|+|+++|.+++.+..|+++++.+            .+++.+.+
T Consensus        94 ~a~Il~~l~I~PG~rVLE~GtGsG~lt~~LAr~vgp~G~V~~~D~~~~~~~~Ar~n~~~~~~~~~~~~~~~~~~~v~~~~  173 (336)
T 2b25_A           94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH  173 (336)
T ss_dssp             HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred             HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf             99999985899998899835377799999999628984899843999999999999997432000122113677079997


Q ss_pred             CCHHHHHHHHHHCCCCEEEEECC
Q ss_conf             32788987653123324786225
Q gi|255764511|r   90 ATFSQLQDYVPDKGVDGVVFDLG  112 (341)
Q Consensus        90 ~~F~~i~~~l~~~~vdgIl~DLG  112 (341)
                      ..+.+....+....+|.|++|+.
T Consensus       174 ~di~~~~~~~~~~~~D~VfLDlp  196 (336)
T 2b25_A          174 KDISGATEDIKSLTFDAVALDML  196 (336)
T ss_dssp             SCTTCCC-------EEEEEECSS
T ss_pred             CCHHHCCCCCCCCCCCEEECCCC
T ss_conf             76665235568875333104676


No 8  
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.35  E-value=3.1e-06  Score=59.58  Aligned_cols=78  Identities=24%  Similarity=0.348  Sum_probs=67.0

Q ss_pred             CCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCC--CCEEEECCCHHHHHHHHHHCCCCEEEEE
Q ss_conf             83888889983768828899999748909998099899999999852148--8527711327889876531233247862
Q gi|255764511|r   33 NPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYK--EQFSLFQATFSQLQDYVPDKGVDGVVFD  110 (341)
Q Consensus        33 ~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~--~r~~~~~~~F~~i~~~l~~~~vdgIl~D  110 (341)
                      ...++..++|+..|.|+.+.++.+.+.+|+|+|.+++++..|+++.+.++  +++.++++++.++.   ....+|.|+.|
T Consensus        75 ~~~~~~~vlD~gcG~G~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~~~~~i~~~~~D~~~~~---~~~~~D~i~~~  151 (241)
T 3gdh_A           75 QSFKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA---SFLKADVVFLS  151 (241)
T ss_dssp             HHSCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG---GGCCCSEEEEC
T ss_pred             HCCCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHH---HCCCCEEEEEC
T ss_conf             028999899937873688999996799899998977888999999998499874399976486641---43784499983


Q ss_pred             CCC
Q ss_conf             252
Q gi|255764511|r  111 LGV  113 (341)
Q Consensus       111 LGv  113 (341)
                      --+
T Consensus       152 pp~  154 (241)
T 3gdh_A          152 PPW  154 (241)
T ss_dssp             CCC
T ss_pred             CCC
T ss_conf             787


No 9  
>2yxd_A Probable cobalt-precorrin-6Y C(15)- methyltransferase [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii DSM2661}
Probab=98.29  E-value=1.2e-05  Score=55.68  Aligned_cols=87  Identities=15%  Similarity=0.205  Sum_probs=72.0

Q ss_pred             HHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHHHCCC
Q ss_conf             868866083888889983768828899999748909998099899999999852148-8527711327889876531233
Q gi|255764511|r   26 EKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVPDKGV  104 (341)
Q Consensus        26 ~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~~~~v  104 (341)
                      .-+++.|+++++.+++|.-.|.|.-|..+.+..++|+|+|.+++++..++++.+.++ +++.+++++..+.   +....+
T Consensus        25 ~l~l~~L~l~~~~~VlDlg~G~G~~si~la~~~~~V~ave~~~~~i~~a~~n~~~~gv~nv~~i~g~a~~~---l~~~~~  101 (183)
T 2yxd_A           25 AVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDV---LDKLEF  101 (183)
T ss_dssp             HHHHHHHCCCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHH---GGGCCC
T ss_pred             HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHH---HHCCCC
T ss_conf             99999769989499999617476999998873899999979899999999999976899879994645656---406998


Q ss_pred             CEEEEECCCHH
Q ss_conf             24786225207
Q gi|255764511|r  105 DGVVFDLGVSS  115 (341)
Q Consensus       105 dgIl~DLGvSS  115 (341)
                      |.|+.+.+-..
T Consensus       102 D~v~ig~~~~~  112 (183)
T 2yxd_A          102 NKAFIGGTKNI  112 (183)
T ss_dssp             SEEEECSCSCH
T ss_pred             CEEEECCCHHH
T ss_conf             94998998709


No 10 
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.22  E-value=1.9e-05  Score=54.38  Aligned_cols=95  Identities=16%  Similarity=0.207  Sum_probs=71.7

Q ss_pred             HHHHHHHHHCC-CCCCEEEECCCCCCHHHHHHHHH--CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHH
Q ss_conf             09868866083-88888998376882889999974--8909998099899999999852148852771132788987653
Q gi|255764511|r   24 LLEKVIALLNP-APGKVILDATFGAGGYSRSFCKM--GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVP  100 (341)
Q Consensus        24 ll~Evl~~l~~-~~~g~~iD~TlG~GGHS~~iL~~--~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~  100 (341)
                      |...+++.+.. .++..++|-=.|.|..+..+++.  +.+++|+|.+++++..|++++.. ..++.++++++.++.  + 
T Consensus        31 ~~~~~~~~~~~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~l~~A~~~~~~-~~~v~~~~~D~~~~~--~-  106 (234)
T 3dtn_A           31 FYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG-NLKVKYIEADYSKYD--F-  106 (234)
T ss_dssp             HHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS-CTTEEEEESCTTTCC--C-
T ss_pred             HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHC-CCCEEEEEEECCCCC--C-
T ss_conf             999999984356999959998176859999999988996899995850457899986302-776247742001345--4-


Q ss_pred             HCCCCEEEEECCCHHHHHHHHHHC
Q ss_conf             123324786225207888765407
Q gi|255764511|r  101 DKGVDGVVFDLGVSSMQIDCGDRG  124 (341)
Q Consensus       101 ~~~vdgIl~DLGvSS~Qld~~~RG  124 (341)
                      ...+|.|+.-  .+.+.+.++++.
T Consensus       107 ~~~fD~I~~~--~~l~~l~~~~~~  128 (234)
T 3dtn_A          107 EEKYDMVVSA--LSIHHLEDEDKK  128 (234)
T ss_dssp             CSCEEEEEEE--SCGGGSCHHHHH
T ss_pred             CCCHHHHHHH--HHHHCCCHHHHH
T ss_conf             4551345557--778708938899


No 11 
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural genomics, NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus VF5}
Probab=98.21  E-value=1.2e-05  Score=55.76  Aligned_cols=90  Identities=16%  Similarity=0.230  Sum_probs=76.1

Q ss_pred             CCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCC--CCEEEECCCHHHHHHH
Q ss_conf             34009868866083888889983768828899999748909998099899999999852148--8527711327889876
Q gi|255764511|r   21 VPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYK--EQFSLFQATFSQLQDY   98 (341)
Q Consensus        21 ~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~--~r~~~~~~~F~~i~~~   98 (341)
                      +|--..-++..+++.||..++|+=.|.|+.|..+.+..++|+++|.+++.++.|+++++.++  +++.+++.++.+.  .
T Consensus        76 ypkD~~~Ii~~l~i~pG~rVLEiGtGsG~lt~~La~~~g~v~t~e~~e~~~~~A~~n~~~~g~~~nv~~~~~D~~~~--~  153 (248)
T 2yvl_A           76 YPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDA--E  153 (248)
T ss_dssp             CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTS--C
T ss_pred             CHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHC--C
T ss_conf             78999999998289999979973743119999998607879998288999999999899700577059999122214--3


Q ss_pred             HHHCCCCEEEEECC
Q ss_conf             53123324786225
Q gi|255764511|r   99 VPDKGVDGVVFDLG  112 (341)
Q Consensus        99 l~~~~vdgIl~DLG  112 (341)
                      .++..+|.|++|+.
T Consensus       154 ~~~~~fD~V~ld~p  167 (248)
T 2yvl_A          154 VPEGIFHAAFVDVR  167 (248)
T ss_dssp             CCTTCBSEEEECSS
T ss_pred             CCCCCCCEEEEECC
T ss_conf             24587899999178


No 12 
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, PSI, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.19  E-value=9.3e-06  Score=56.45  Aligned_cols=89  Identities=19%  Similarity=0.340  Sum_probs=72.2

Q ss_pred             CCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHC----CCCEEEECCCHH
Q ss_conf             3400986886608388888998376882889999974---890999809989999999985214----885277113278
Q gi|255764511|r   21 VPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDY----KEQFSLFQATFS   93 (341)
Q Consensus        21 ~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~----~~r~~~~~~~F~   93 (341)
                      +|--..-++..+++.||..++|+=.|.|.-|.+++..   .|+|+++|.+++.+..|+++++.+    .+++.+.++++.
T Consensus        84 ypkD~~~Ii~~ldi~PG~~VLE~GtGsG~lT~~LAr~vgp~G~V~t~D~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~  163 (280)
T 1i9g_A           84 YPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLA  163 (280)
T ss_dssp             CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGG
T ss_pred             CHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
T ss_conf             85899999998499999989992276159999999974998599999589999999998555431578862999955512


Q ss_pred             HHHHHHHHCCCCEEEEEC
Q ss_conf             898765312332478622
Q gi|255764511|r   94 QLQDYVPDKGVDGVVFDL  111 (341)
Q Consensus        94 ~i~~~l~~~~vdgIl~DL  111 (341)
                      +.  -+++..+|+|++|+
T Consensus       164 ~~--~~~~~~fD~VflDl  179 (280)
T 1i9g_A          164 DS--ELPDGSVDRAVLDM  179 (280)
T ss_dssp             GC--CCCTTCEEEEEEES
T ss_pred             CC--CCCCCCCCEEEECC
T ss_conf             25--56678878689727


No 13 
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} SCOP: c.66.1.16 PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.17  E-value=1.1e-05  Score=56.06  Aligned_cols=93  Identities=13%  Similarity=0.185  Sum_probs=76.8

Q ss_pred             CCCCH------HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCH
Q ss_conf             33400------98688660838888899837688288999997489-099980998999999998521488527711327
Q gi|255764511|r   20 HVPVL------LEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDYKEQFSLFQATF   92 (341)
Q Consensus        20 H~PVl------l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F   92 (341)
                      ..|||      +.+.+.-....+|+.++|.=.|.|..+..|++..+ +++|+|.+|.+++.|+++.+..+.++.++....
T Consensus        38 ~~~~m~~w~~~~~~~l~~~~~~~g~rVLeiG~G~G~~a~~la~~~~~~vt~id~s~~~l~~a~~~~~~~~~~~~~~~~~~  117 (236)
T 1zx0_A           38 GKPVMERWETPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLW  117 (236)
T ss_dssp             TEEEEEGGGHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCH
T ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEECHH
T ss_conf             70767876899999999753448984999888850999999972997799980898999999998875588620232008


Q ss_pred             HHHHHHHHHCCCCEEEEECC
Q ss_conf             88987653123324786225
Q gi|255764511|r   93 SQLQDYVPDKGVDGVVFDLG  112 (341)
Q Consensus        93 ~~i~~~l~~~~vdgIl~DLG  112 (341)
                      ..+...+....+|.|++|.=
T Consensus       118 ~~~~~~~~~~~fD~i~~D~~  137 (236)
T 1zx0_A          118 EDVAPTLPDGHFDGILYDTY  137 (236)
T ss_dssp             HHHGGGSCTTCEEEEEECCC
T ss_pred             HHHHCCCCCCCCCCEEECCE
T ss_conf             87620122356674452116


No 14 
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomics, JCSG, PSI, protein structure initiative; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.17  E-value=1.9e-05  Score=54.47  Aligned_cols=86  Identities=16%  Similarity=0.291  Sum_probs=70.8

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCC--CCEEEECCCHHHHHHH
Q ss_conf             0986886608388888998376882889999974---8909998099899999999852148--8527711327889876
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYK--EQFSLFQATFSQLQDY   98 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~--~r~~~~~~~F~~i~~~   98 (341)
                      -..-++..+++.||..++|+-.|.|+-|..++..   .++|+++|.+++.+..|+++++.++  +++.+.+..+.+   .
T Consensus       100 D~~~Ii~~ldi~pG~~VLDiG~GsG~lt~~lA~~v~~~g~V~~~D~~~~~~~~A~~n~~~~gl~~~v~~~~~D~~~---~  176 (277)
T 1o54_A          100 DSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISE---G  176 (277)
T ss_dssp             HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGG---C
T ss_pred             HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCC---C
T ss_conf             9999999808999998997688827999999985189809999968899999999989974998767999686224---4


Q ss_pred             HHHCCCCEEEEECC
Q ss_conf             53123324786225
Q gi|255764511|r   99 VPDKGVDGVVFDLG  112 (341)
Q Consensus        99 l~~~~vdgIl~DLG  112 (341)
                      .....+|.|++|++
T Consensus       177 ~~~~~~D~V~ld~p  190 (277)
T 1o54_A          177 FDEKDVDALFLDVP  190 (277)
T ss_dssp             CSCCSEEEEEECCS
T ss_pred             CCCCCCCEEECCCC
T ss_conf             44445410221789


No 15 
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.13  E-value=2.7e-05  Score=53.44  Aligned_cols=81  Identities=21%  Similarity=0.334  Sum_probs=67.9

Q ss_pred             HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCC--CCEEEECCCHHHHHHHHHHCCC
Q ss_conf             68866083888889983768828899999748909998099899999999852148--8527711327889876531233
Q gi|255764511|r   27 KVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYK--EQFSLFQATFSQLQDYVPDKGV  104 (341)
Q Consensus        27 Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~--~r~~~~~~~F~~i~~~l~~~~v  104 (341)
                      -++..+.+.++..++|.--|.|+.|.+++...++|+|+|.|++++..++++.+.++  +++.+++++..+..  .....+
T Consensus        24 ~il~~l~~~~g~~VLDiGcG~G~~s~~la~~~~~V~avD~~~~~~~~a~~~~~~~gl~~~v~~~~gd~~~~~--~~~~~~  101 (192)
T 1l3i_A           24 LIMCLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEAL--CKIPDI  101 (192)
T ss_dssp             HHHHHHCCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHH--TTSCCE
T ss_pred             HHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCHHHCC--CCCCCC
T ss_conf             999866999979999983870499999984399999999062889999999998099988899988621053--000886


Q ss_pred             CEEEE
Q ss_conf             24786
Q gi|255764511|r  105 DGVVF  109 (341)
Q Consensus       105 dgIl~  109 (341)
                      |-|+.
T Consensus       102 D~v~~  106 (192)
T 1l3i_A          102 DIAVV  106 (192)
T ss_dssp             EEEEE
T ss_pred             CEEEE
T ss_conf             88999


No 16 
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein structure initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.13  E-value=1.2e-05  Score=55.73  Aligned_cols=78  Identities=14%  Similarity=0.155  Sum_probs=65.9

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHC---CCCEEEECCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf             88888998376882889999974890999809989999999985214---885277113278898765312332478622
Q gi|255764511|r   35 APGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDY---KEQFSLFQATFSQLQDYVPDKGVDGVVFDL  111 (341)
Q Consensus        35 ~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~---~~r~~~~~~~F~~i~~~l~~~~vdgIl~DL  111 (341)
                      .+|+.++|+|-|-|+.+.++-..+.+|+++|+||.+...|+.+++.+   ..++.++++...+....+....+|.|++|-
T Consensus        92 ~~g~~v~Dl~cG~G~da~alA~~~~~V~~vE~d~~~~~~A~~N~~~~~~~~~~v~~~~~D~~~~l~~~~~~~~d~v~~DP  171 (410)
T 3ll7_A           92 REGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDP  171 (410)
T ss_dssp             CTTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECC
T ss_pred             CCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCCEEEECC
T ss_conf             79998998788667999999963998999958999999999848987267882699966688887534677788899766


Q ss_pred             C
Q ss_conf             5
Q gi|255764511|r  112 G  112 (341)
Q Consensus       112 G  112 (341)
                      -
T Consensus       172 a  172 (410)
T 3ll7_A          172 A  172 (410)
T ss_dssp             E
T ss_pred             C
T ss_conf             2


No 17 
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum dsm 1728} SCOP: c.66.1.13
Probab=98.13  E-value=9.7e-06  Score=56.33  Aligned_cols=85  Identities=16%  Similarity=0.294  Sum_probs=69.9

Q ss_pred             HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCC--CCEEEECCCHHHHHHHH
Q ss_conf             986886608388888998376882889999974---8909998099899999999852148--85277113278898765
Q gi|255764511|r   25 LEKVIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYK--EQFSLFQATFSQLQDYV   99 (341)
Q Consensus        25 l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~--~r~~~~~~~F~~i~~~l   99 (341)
                      ..-++..+.+.||..++|+-.|.|+-|.+++..   .++|+++|.+++.++.|+++++.+.  +++.+++.++.+   .+
T Consensus        99 ~~~Ii~~l~i~PG~rVLEiG~GsG~lt~~LA~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nV~~~~~Di~e---~~  175 (275)
T 1yb2_A           99 ASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD---FI  175 (275)
T ss_dssp             -------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT---CC
T ss_pred             HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHEEHHHHH---CC
T ss_conf             999999719999798999577187899999986089958999908899999999867763156752111011221---02


Q ss_pred             HHCCCCEEEEECC
Q ss_conf             3123324786225
Q gi|255764511|r  100 PDKGVDGVVFDLG  112 (341)
Q Consensus       100 ~~~~vdgIl~DLG  112 (341)
                      .+..+|.|++|+.
T Consensus       176 ~~~~fD~V~ld~p  188 (275)
T 1yb2_A          176 SDQMYDAVIADIP  188 (275)
T ss_dssp             CSCCEEEEEECCS
T ss_pred             CCCCCCCEEEECC
T ss_conf             4442330587056


No 18 
>3dmg_A Probable ribosomal RNA small subunit methyltransferase; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.07  E-value=9.3e-05  Score=50.00  Aligned_cols=41  Identities=20%  Similarity=0.280  Sum_probs=29.5

Q ss_pred             CHHHHHHHHHHHHHCCCCCCEEEEEEE-CCCHHHHHHHHHHH
Q ss_conf             057899999988520244533899872-55023899999986
Q gi|255764511|r  224 EIEELAQGLRSAEKALKAGGLLIVVSF-HSLEDRLVKKFFAS  264 (341)
Q Consensus       224 El~~L~~~L~~~~~~L~~gGrl~VISF-HSLEDRiVK~ff~~  264 (341)
                      ..+.++.++..+.++|+|||++.+++= |---..+++..|..
T Consensus       315 ~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~y~~~l~~~f~~  356 (381)
T 3dmg_A          315 ILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGA  356 (381)
T ss_dssp             CCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHSC
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCC
T ss_conf             889999999999987584848999973888818999986085


No 19 
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; NP_988299.1, structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.06  E-value=4.2e-06  Score=58.72  Aligned_cols=105  Identities=18%  Similarity=0.246  Sum_probs=82.8

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH-CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCH
Q ss_conf             607833400986886608388888998376882889999974-890999809989999999985214--88527711327
Q gi|255764511|r   16 TIGDHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM-GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATF   92 (341)
Q Consensus        16 ~~~~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~-~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F   92 (341)
                      .....+|++.+++++.+..+++ .++|-=.|.|..+..+++. +.+++|+|..++++..|++++...  .+++.+.++++
T Consensus        24 ~f~~~y~~~~~~i~~~~~~~~~-~VLDiGcG~G~~~~~la~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~  102 (219)
T 3dlc_A           24 LFAPIYPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDV  102 (219)
T ss_dssp             TTTTHHHHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBT
T ss_pred             HHHCCHHHHHHHHHHHCCCCCC-EEEEECCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEECCCCC
T ss_conf             7211169999999997299999-399962758599999995369989999797899999987444216666400013653


Q ss_pred             HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCC
Q ss_conf             889876531233247862252078887654073
Q gi|255764511|r   93 SQLQDYVPDKGVDGVVFDLGVSSMQIDCGDRGF  125 (341)
Q Consensus        93 ~~i~~~l~~~~vdgIl~DLGvSS~Qld~~~RGF  125 (341)
                      .++.  ++...+|.|+.-..+  +++.++...|
T Consensus       103 ~~~~--~~~~~fD~V~~~~~l--~h~~d~~~~l  131 (219)
T 3dlc_A          103 HNIP--IEDNYADLIVSRGSV--FFWEDVATAF  131 (219)
T ss_dssp             TBCS--SCTTCEEEEEEESCG--GGCSCHHHHH
T ss_pred             CCCC--CCCCCCCEEEECCHH--HHCCCHHHHH
T ss_conf             3567--544555299984416--7458999999


No 20 
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus HB27}
Probab=97.98  E-value=5.3e-05  Score=51.58  Aligned_cols=92  Identities=22%  Similarity=0.383  Sum_probs=74.4

Q ss_pred             CCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHH
Q ss_conf             833400986886608388888998376882889999974---890999809989999999985214--885277113278
Q gi|255764511|r   19 DHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFS   93 (341)
Q Consensus        19 ~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~   93 (341)
                      --+|-...-++..+++.||..++|+=.|.|+-|..+.+.   .++|+++|.++++++.|+++++.+  .+++.+.++++.
T Consensus        79 iiyp~d~~~Ii~~l~i~pG~~VLEiG~GsG~lt~~lA~~v~~~g~V~~~d~~~~~~~~A~~n~~~~~~~~~v~~~~~d~~  158 (258)
T 2pwy_A           79 PTYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLE  158 (258)
T ss_dssp             CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGG
T ss_pred             CCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHH
T ss_conf             74779999999971989999999877706799999999728873899984899999999999998089985568836578


Q ss_pred             HHHHHHHHCCCCEEEEECC
Q ss_conf             8987653123324786225
Q gi|255764511|r   94 QLQDYVPDKGVDGVVFDLG  112 (341)
Q Consensus        94 ~i~~~l~~~~vdgIl~DLG  112 (341)
                      +.  ......+|.|++|+.
T Consensus       159 ~~--~~~~~~~d~v~ld~p  175 (258)
T 2pwy_A          159 EA--ELEEAAYDGVALDLM  175 (258)
T ss_dssp             GC--CCCTTCEEEEEEESS
T ss_pred             HC--CCCCCCCCEEEECCC
T ss_conf             85--555643238996488


No 21 
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii OT3} SCOP: c.66.1.43
Probab=97.98  E-value=4.9e-05  Score=51.79  Aligned_cols=83  Identities=14%  Similarity=0.233  Sum_probs=69.3

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCC
Q ss_conf             09868866083888889983768828899999748909998099899999999852148852771132788987653123
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKG  103 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~  103 (341)
                      .+.+.+..+.+.++..++|.=.|.|.++..+.+.+.+++|+|.+++++..|+++..+...+..++++++.++.   .+..
T Consensus        29 ~~~~~~~~~~~~~~~~ILDiGcGtG~~~~~l~~~g~~v~gvD~s~~ml~~a~~~~~~~~~~~~~~~~d~~~l~---~~~~  105 (252)
T 1wzn_A           29 FVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA---FKNE  105 (252)
T ss_dssp             HHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC---CCSC
T ss_pred             HHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCHHHCC---CCCC
T ss_conf             9999999735789898999547586999999976998999974688999999977642875236865542056---6777


Q ss_pred             CCEEEE
Q ss_conf             324786
Q gi|255764511|r  104 VDGVVF  109 (341)
Q Consensus       104 vdgIl~  109 (341)
                      +|.|+.
T Consensus       106 fD~V~~  111 (252)
T 1wzn_A          106 FDAVTM  111 (252)
T ss_dssp             EEEEEE
T ss_pred             CCEEEE
T ss_conf             548999


No 22 
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.96  E-value=6e-05  Score=51.25  Aligned_cols=84  Identities=21%  Similarity=0.225  Sum_probs=60.7

Q ss_pred             HHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHH---------HCCCCEEEECCCHHHHH-HHH
Q ss_conf             66083888889983768828899999748909998099899999999852---------14885277113278898-765
Q gi|255764511|r   30 ALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMR---------DYKEQFSLFQATFSQLQ-DYV   99 (341)
Q Consensus        30 ~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~---------~~~~r~~~~~~~F~~i~-~~l   99 (341)
                      ..+...++..++|||.|.|+.|-.+...+.+|+++|++|......++-++         ....|+.+++++..+.- .+.
T Consensus        77 kA~g~~~~~~VLD~taGlG~Da~~lA~~G~~V~~vE~sp~~~~Ll~~~l~~a~~~~~~~~~~~ri~~~~gDa~~~l~~l~  156 (258)
T 2r6z_A           77 KAVNHTAHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALV  156 (258)
T ss_dssp             HHTTGGGCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHH
T ss_pred             HHHCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf             98588789819990787359999999769989999688899999999999999696876788755710075999999999


Q ss_pred             H-HCCCCEEEEECCC
Q ss_conf             3-1233247862252
Q gi|255764511|r  100 P-DKGVDGVVFDLGV  113 (341)
Q Consensus       100 ~-~~~vdgIl~DLGv  113 (341)
                      . ...+|.|++|-=+
T Consensus       157 ~~~~~~DvIylDPMf  171 (258)
T 2r6z_A          157 KTQGKPDIVYLDPMY  171 (258)
T ss_dssp             HHHCCCSEEEECCCC
T ss_pred             HCCCCCCEEEECCCC
T ss_conf             638998889988999


No 23 
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus HB8} PDB: 2yr0_A
Probab=97.96  E-value=1.8e-05  Score=54.54  Aligned_cols=115  Identities=19%  Similarity=0.269  Sum_probs=87.5

Q ss_pred             CCCCCCHHHHHHH----HHCCC-CCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCH
Q ss_conf             7833400986886----60838-888899837688288999997489099980998999999998521488527711327
Q gi|255764511|r   18 GDHVPVLLEKVIA----LLNPA-PGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATF   92 (341)
Q Consensus        18 ~~H~PVll~Evl~----~l~~~-~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F   92 (341)
                      -.|.|.-...+..    .+.+. ++..++|.-.|.|+.|..+...+.+|+|+|..+.+++.|++++...+.++.+.+++.
T Consensus        16 ~~~~~~~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~t~~la~~~~~V~gvD~S~~~l~~a~~r~~~~~~~v~~~~~da   95 (263)
T 2yqz_A           16 RAHPPEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADA   95 (263)
T ss_dssp             HCCCHHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHCC
T ss_conf             65678999999999998612358999899951788699999996699899998989999998740210114410222012


Q ss_pred             HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCC-----CCCCCCEECC
Q ss_conf             8898765312332478622520788876540734-----4566410104
Q gi|255764511|r   93 SQLQDYVPDKGVDGVVFDLGVSSMQIDCGDRGFS-----FQKSGPLDMR  136 (341)
Q Consensus        93 ~~i~~~l~~~~vdgIl~DLGvSS~Qld~~~RGFS-----f~~dgpLDMR  136 (341)
                      .++.  +++..+|.|+.-.++  ++++++.+.|.     .+.+|.|=..
T Consensus        96 ~~l~--~~~~sfD~V~~~~~l--~~~~d~~~~l~e~~r~LkPGG~l~~~  140 (263)
T 2yqz_A           96 RAIP--LPDESVHGVIVVHLW--HLVPDWPKVLAEAIRVLKPGGALLEG  140 (263)
T ss_dssp             TSCC--SCTTCEEEEEEESCG--GGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCC--CCCCCCCEEEECCHH--HHCCCHHHHHHHHHHHCCCCCEEEEE
T ss_conf             2234--667610478751227--75589999999999985808389999


No 24 
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.92  E-value=0.00012  Score=49.33  Aligned_cols=89  Identities=17%  Similarity=0.275  Sum_probs=70.0

Q ss_pred             CCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHH
Q ss_conf             3400986886608388888998376882889999974---890999809989999999985214--88527711327889
Q gi|255764511|r   21 VPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQL   95 (341)
Q Consensus        21 ~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i   95 (341)
                      +|--..-++..+++.||..++|+-.|.|+-|..+...   .++|+|+|.+++++..|+++++..  .+++.+.+..... 
T Consensus        78 yp~d~~~Ii~~l~i~pG~rVLd~G~GsG~lt~~lar~~~~~G~V~~~D~~~~~~~~A~~n~~~~gl~~~v~~~~~D~~~-  156 (255)
T 3mb5_A           78 HPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE-  156 (255)
T ss_dssp             CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG-
T ss_pred             CHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCHHC-
T ss_conf             8899999999719898998998886627999999974388977998349999999999999971998149999461103-


Q ss_pred             HHHHHHCCCCEEEEECC
Q ss_conf             87653123324786225
Q gi|255764511|r   96 QDYVPDKGVDGVVFDLG  112 (341)
Q Consensus        96 ~~~l~~~~vdgIl~DLG  112 (341)
                        ......+|.|++|+.
T Consensus       157 --~~~~~~~D~V~ld~p  171 (255)
T 3mb5_A          157 --GIEEENVDHVILDLP  171 (255)
T ss_dssp             --CCCCCSEEEEEECSS
T ss_pred             --CCCCCCCCEEEEECC
T ss_conf             --555565657999668


No 25 
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.91  E-value=0.00012  Score=49.28  Aligned_cols=94  Identities=12%  Similarity=0.112  Sum_probs=73.7

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHH
Q ss_conf             33400986886608388888998376882889999974---8909998099899999999852148-8527711327889
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQL   95 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i   95 (341)
                      -.|-|+..+++.|.++++..++|---|.|.-|..+.+.   .++|+++|+|++.+..|+++++..+ +++.+++++..+.
T Consensus        59 s~P~~~A~ml~~L~l~~g~~VLeIGtGtGy~aa~la~~~~~~~~V~~iE~~~~l~~~A~~~l~~~g~~nv~~~~gD~~~g  138 (317)
T 1dl5_A           59 SQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG  138 (317)
T ss_dssp             CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred             CHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCHHHC
T ss_conf             67999999999718999998999179764768999886188867999957817899999989973578739998955758


Q ss_pred             HHHHHHCCCCEEEEECCCHH
Q ss_conf             87653123324786225207
Q gi|255764511|r   96 QDYVPDKGVDGVVFDLGVSS  115 (341)
Q Consensus        96 ~~~l~~~~vdgIl~DLGvSS  115 (341)
                      .  .....+|.|+.+.++..
T Consensus       139 ~--~~~~~fD~Iiv~~~~~~  156 (317)
T 1dl5_A          139 V--PEFSPYDVIFVTVGVDE  156 (317)
T ss_dssp             C--GGGCCEEEEEECSBBSC
T ss_pred             C--CCCCCCCEEEECCCHHH
T ss_conf             8--77899419999687688


No 26 
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=97.90  E-value=4.5e-05  Score=52.05  Aligned_cols=86  Identities=24%  Similarity=0.332  Sum_probs=71.1

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHH
Q ss_conf             0986886608388888998376882889999974---8909998099899999999852148-85277113278898765
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYV   99 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l   99 (341)
                      .-+++++.+.++++..++|.-.|.|..+..+.+.   +++|+|+|..+.++..++++.++.+ .++.+++++..++.  +
T Consensus        25 ~~~~~l~~~~l~~g~~VLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~v~~~~~d~~~lp--~  102 (219)
T 3dh0_A           25 DPEKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP--L  102 (219)
T ss_dssp             CHHHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS--S
T ss_pred             CHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCEEHHHHHHHHCCC--C
T ss_conf             99999986598993999998788887799999750898399998500377889999767640221001000333277--5


Q ss_pred             HHCCCCEEEEEC
Q ss_conf             312332478622
Q gi|255764511|r  100 PDKGVDGVVFDL  111 (341)
Q Consensus       100 ~~~~vdgIl~DL  111 (341)
                      +...+|.|+.-.
T Consensus       103 ~~~sfD~V~~~~  114 (219)
T 3dh0_A          103 PDNTVDFIFMAF  114 (219)
T ss_dssp             CSSCEEEEEEES
T ss_pred             CCCCEEEHHHCC
T ss_conf             555421357314


No 27 
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase- like protein, methyltransferase domain; 1.85A {Lactobacillus casei atcc 334}
Probab=97.88  E-value=2.1e-05  Score=54.11  Aligned_cols=110  Identities=14%  Similarity=0.118  Sum_probs=84.7

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHH------HHHHHHHHHHHC--CCCEEEECCCH
Q ss_conf             0986886608388888998376882889999974---890999809989------999999985214--88527711327
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPF------AVSCGQETMRDY--KEQFSLFQATF   92 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~------ai~~a~~~l~~~--~~r~~~~~~~F   92 (341)
                      .-.++++.+.++||..++|.-.|.|+.|..+.+.   .++|+|+|.++.      ++..|+++....  .+++.|.....
T Consensus        31 ~~~~ll~~~~i~pG~rVLDiGCG~G~~t~~la~~~g~~~~V~gvD~s~~~~~~~~~l~~A~~~~~~~~~~~~i~~~~~d~  110 (275)
T 3bkx_A           31 HRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTN  110 (275)
T ss_dssp             HHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCC
T ss_pred             HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHH
T ss_conf             99999986797986989996653885789999983877752347677777666689999999988557777401020015


Q ss_pred             HHHHHH-HHHCCCCEEEEECCCHHHHHHHHHHCCCC-----CCCCCEEC
Q ss_conf             889876-53123324786225207888765407344-----56641010
Q gi|255764511|r   93 SQLQDY-VPDKGVDGVVFDLGVSSMQIDCGDRGFSF-----QKSGPLDM  135 (341)
Q Consensus        93 ~~i~~~-l~~~~vdgIl~DLGvSS~Qld~~~RGFSf-----~~dgpLDM  135 (341)
                      ...... .++..||.|+.-.+  -+++.++...|.-     +..|.|-.
T Consensus       111 ~~~~~lp~~~~sFD~V~~~~~--l~~~~d~~~~l~~~~rvLkpGG~l~~  157 (275)
T 3bkx_A          111 LSDDLGPIADQHFDRVVLAHS--LWYFASANALALLFKNMAAVCDHVDV  157 (275)
T ss_dssp             TTTCCGGGTTCCCSEEEEESC--GGGSSCHHHHHHHHHHHTTTCSEEEE
T ss_pred             HHHCCCCCCCCCCCEEEEEEE--EECCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf             440247644576268978016--33289999999999997687878999


No 28 
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structural genomics; HET: SAH; 2.20A {Pyrococcus horikoshii OT3} SCOP: c.66.1.32
Probab=97.87  E-value=9.1e-05  Score=50.07  Aligned_cols=79  Identities=28%  Similarity=0.382  Sum_probs=65.3

Q ss_pred             HHHCCCCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEE
Q ss_conf             660838888899837688288999997489-0999809989999999985214885277113278898765312332478
Q gi|255764511|r   30 ALLNPAPGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVV  108 (341)
Q Consensus        30 ~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl  108 (341)
                      ..+...+|..++|.-.|.|+-+.+.+..++ +|+|+|.|+.++..++++++..+.++.++.++..++     ..++|.|+
T Consensus        43 ~~~~dl~g~~vlDlg~G~G~l~i~a~~~g~~~v~~vDid~~~~~~a~~N~~~~~~~~~~~~~d~~~~-----~~~~D~ii  117 (207)
T 1wy7_A           43 YSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-----NSRVDIVI  117 (207)
T ss_dssp             HHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-----CCCCSEEE
T ss_pred             HHCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCHHHH-----HCCCCEEE
T ss_conf             8649879898999134256999999974998699987989999999999998399827997667886-----14654644


Q ss_pred             EECCC
Q ss_conf             62252
Q gi|255764511|r  109 FDLGV  113 (341)
Q Consensus       109 ~DLGv  113 (341)
                      .|--+
T Consensus       118 ~npP~  122 (207)
T 1wy7_A          118 MNPPF  122 (207)
T ss_dssp             ECCCC
T ss_pred             CCCCC
T ss_conf             48885


No 29 
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=97.86  E-value=2.5e-05  Score=53.65  Aligned_cols=106  Identities=18%  Similarity=0.210  Sum_probs=83.3

Q ss_pred             HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHC-CCCEEEECCCHHHHHHHHHHCC
Q ss_conf             986886608388888998376882889999974890999809989999999985214-8852771132788987653123
Q gi|255764511|r   25 LEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDY-KEQFSLFQATFSQLQDYVPDKG  103 (341)
Q Consensus        25 l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~-~~r~~~~~~~F~~i~~~l~~~~  103 (341)
                      +-=.++.++++||..++|.=.|.|.++..+.+.+++|+|+|..+.++..|+++.... -+++.++++++.++.  +++..
T Consensus        10 ~~~l~~~~~~~pg~rVLDiGCGtG~~~~~la~~~~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~d~~~l~--~~d~~   87 (239)
T 1xxl_A           10 LGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP--FPDDS   87 (239)
T ss_dssp             HHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC--SCTTC
T ss_pred             HHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCCC--CCCCC
T ss_conf             9999998589998989995886859999999709979999799999999998654305654000102223568--88873


Q ss_pred             CCEEEEECCCHHHHHHHHHHCCC-----CCCCCCEE
Q ss_conf             32478622520788876540734-----45664101
Q gi|255764511|r  104 VDGVVFDLGVSSMQIDCGDRGFS-----FQKSGPLD  134 (341)
Q Consensus       104 vdgIl~DLGvSS~Qld~~~RGFS-----f~~dgpLD  134 (341)
                      +|.|+.-.  +.+++.|++.-|+     .+.+|.+=
T Consensus        88 fD~v~~~~--~l~~~~d~~~~l~ei~r~LkpgG~~~  121 (239)
T 1xxl_A           88 FDIITCRY--AAHHFSDVRKAVREVARVLKQDGRFL  121 (239)
T ss_dssp             EEEEEEES--CGGGCSCHHHHHHHHHHHEEEEEEEE
T ss_pred             EEEEHHCC--CHHCCCCHHHHHHHHHHHCCCCCEEE
T ss_conf             65302045--12224689999999999808382999


No 30 
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, structural genomics; 2.00A {Methanocaldococcus jannaschii DSM2661}
Probab=97.84  E-value=0.00011  Score=49.53  Aligned_cols=92  Identities=17%  Similarity=0.255  Sum_probs=74.4

Q ss_pred             CCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH----CCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHH
Q ss_conf             3400986886608388888998376882889999974----8909998099899999999852148-8527711327889
Q gi|255764511|r   21 VPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM----GSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQL   95 (341)
Q Consensus        21 ~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~----~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i   95 (341)
                      .|-|+--+++.|++++|..++|.--|. |+..++|..    .++|+++|+|++.+..|++++...+ +++.+++++... 
T Consensus        62 ~P~~~a~~l~~l~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~V~~iE~~~~l~~~a~~~l~~~~~~nv~~~~gd~~~-  139 (215)
T 2yxe_A           62 AIHMVGMMCELLDLKPGMKVLEIGTGC-GYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTL-  139 (215)
T ss_dssp             CHHHHHHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGG-
T ss_pred             CHHHHHHHHHHHCCCCCCEEEEECCCC-CHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCC-
T ss_conf             779999999863589998899827884-199999999848887189995288999999999986156644999888655-


Q ss_pred             HHHHHHCCCCEEEEECCCHH
Q ss_conf             87653123324786225207
Q gi|255764511|r   96 QDYVPDKGVDGVVFDLGVSS  115 (341)
Q Consensus        96 ~~~l~~~~vdgIl~DLGvSS  115 (341)
                       .+.....+|.|+...++.+
T Consensus       140 -g~~~~~~fD~I~v~~~~~~  158 (215)
T 2yxe_A          140 -GYEPLAPYDRIYTTAAGPK  158 (215)
T ss_dssp             -CCGGGCCEEEEEESSBBSS
T ss_pred             -CCCCCCCCCEEEEECCCHH
T ss_conf             -7534688648999456101


No 31 
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=97.81  E-value=0.00014  Score=48.83  Aligned_cols=106  Identities=18%  Similarity=0.210  Sum_probs=81.0

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH-CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHHHHHH
Q ss_conf             0986886608388888998376882889999974-890999809989999999985214--8852771132788987653
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM-GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQDYVP  100 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~-~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~~~l~  100 (341)
                      |++++++.+.+++|..++|.-.|.|+.+..+++. +.+|+|+|..+.++..++++....  ..++.+...++.++.  ..
T Consensus        49 ~~~~l~~~~~l~~g~~VLDiGcG~G~~~~~~~~~~~~~v~gvD~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~  126 (273)
T 3bus_A           49 LTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP--FE  126 (273)
T ss_dssp             HHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--SC
T ss_pred             HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC--CC
T ss_conf             9999998669899798999789799889999984598899997848889999999987177732100134434688--77


Q ss_pred             HCCCCEEEEECCCHHHHHHHHHHCCC-----CCCCCCE
Q ss_conf             12332478622520788876540734-----4566410
Q gi|255764511|r  101 DKGVDGVVFDLGVSSMQIDCGDRGFS-----FQKSGPL  133 (341)
Q Consensus       101 ~~~vdgIl~DLGvSS~Qld~~~RGFS-----f~~dgpL  133 (341)
                      ...+|.|+.-..  .+++.++.+-|+     .+.+|.|
T Consensus       127 ~~~fD~v~~~~~--l~h~~d~~~~l~~~~r~LkpgG~l  162 (273)
T 3bus_A          127 DASFDAVWALES--LHHMPDRGRALREMARVLRPGGTV  162 (273)
T ss_dssp             TTCEEEEEEESC--TTTSSCHHHHHHHHHTTEEEEEEE
T ss_pred             CCCCCEEEECCC--EEECCCHHHHHHHHHHHCCCCCEE
T ss_conf             776248986462--650664999999999865999689


No 32 
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1, methyltransferase domain, structural genomics; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.79  E-value=3.1e-05  Score=53.13  Aligned_cols=87  Identities=14%  Similarity=0.139  Sum_probs=59.7

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH-CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHH
Q ss_conf             33400986886608388888998376882889999974-89099980998999999998521488527711327889876
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM-GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDY   98 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~-~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~   98 (341)
                      -.|-|.+-+-.......+..++|+=.|.|++|..++.. +.+|+|+|..+.++..|+++.+..+-++.+++++..++.  
T Consensus         7 ~~~~l~r~l~~~~~~~~~~~VLDiGcG~G~~~~~~~~~~~~~v~gvD~S~~~i~~a~~~~~~~~~~v~~~~~d~~~l~--   84 (209)
T 2p8j_A            7 RQPQLYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLP--   84 (209)
T ss_dssp             SCTHHHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCC--
T ss_pred             HHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCEEECCC--
T ss_conf             428999999973010698989997278899999999858998999959799999998622035743653002022368--


Q ss_pred             HHHCCCCEEE
Q ss_conf             5312332478
Q gi|255764511|r   99 VPDKGVDGVV  108 (341)
Q Consensus        99 l~~~~vdgIl  108 (341)
                      .++..+|.|+
T Consensus        85 ~~~~sfD~I~   94 (209)
T 2p8j_A           85 FKDESMSFVY   94 (209)
T ss_dssp             SCTTCEEEEE
T ss_pred             CCCCCCCHHH
T ss_conf             5434233888


No 33 
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.78  E-value=0.00015  Score=48.66  Aligned_cols=89  Identities=19%  Similarity=0.282  Sum_probs=71.9

Q ss_pred             HHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHH-HC
Q ss_conf             886608388888998376882889999974---8909998099899999999852148-852771132788987653-12
Q gi|255764511|r   28 VIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVP-DK  102 (341)
Q Consensus        28 vl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~-~~  102 (341)
                      +...|++++|..++|+--|-||-|.+|.+.   .+.|+|+|.++.-+...+++++.++ .++.+++.++..+....+ ..
T Consensus        94 ~~~~l~~~~g~~VLD~CAapGgKt~~la~l~~~~~~i~a~D~~~~Rl~~l~~~~~r~g~~~v~~~~~d~~~~~~~~~~~~  173 (309)
T 2b9e_A           94 PAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYH  173 (309)
T ss_dssp             HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGT
T ss_pred             HHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCC
T ss_conf             99973999999499967896579999998725896699980878889999876775087349997042444443344455


Q ss_pred             CCCEEEEECCCHHH
Q ss_conf             33247862252078
Q gi|255764511|r  103 GVDGVVFDLGVSSM  116 (341)
Q Consensus       103 ~vdgIl~DLGvSS~  116 (341)
                      ++|.||+|-=.|..
T Consensus       174 ~fd~IlvDaPCSg~  187 (309)
T 2b9e_A          174 EVHYILLDPSCSGS  187 (309)
T ss_dssp             TEEEEEECCCCCC-
T ss_pred             CEEEEEECCCCCCC
T ss_conf             11399932897888


No 34 
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.78  E-value=0.00043  Score=45.72  Aligned_cols=89  Identities=17%  Similarity=0.276  Sum_probs=73.9

Q ss_pred             HHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHH--H
Q ss_conf             886608388888998376882889999974---8909998099899999999852148-852771132788987653--1
Q gi|255764511|r   28 VIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVP--D  101 (341)
Q Consensus        28 vl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~--~  101 (341)
                      +...|.+++|..++|+--|.||.|.+|...   .+.++|+|.++.-+...+++++..+ .++.+.+..+..+.....  .
T Consensus        75 ~~~~l~~~~g~~vLD~CaapGgKt~~i~~~~~~~~~i~a~d~~~~rl~~l~~~~~r~g~~~~~~~~~d~~~~~~~~~~~~  154 (274)
T 3ajd_A           75 PPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNE  154 (274)
T ss_dssp             HHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTT
T ss_pred             HHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCC
T ss_conf             89758999999799907888688999999853868338732778899999887876511441002243767666531454


Q ss_pred             CCCCEEEEECCCHHH
Q ss_conf             233247862252078
Q gi|255764511|r  102 KGVDGVVFDLGVSSM  116 (341)
Q Consensus       102 ~~vdgIl~DLGvSS~  116 (341)
                      ..+|.||+|--.|..
T Consensus       155 ~~fD~ILlDaPCSg~  169 (274)
T 3ajd_A          155 IFFDKILLDAPCSGN  169 (274)
T ss_dssp             CCEEEEEEEECCC--
T ss_pred             CCCCEEEECCCCCCC
T ss_conf             457679963887666


No 35 
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase, structural genomics; 1.90A {Anabaena variabilis atcc 29413}
Probab=97.77  E-value=2.5e-05  Score=53.71  Aligned_cols=97  Identities=22%  Similarity=0.317  Sum_probs=75.8

Q ss_pred             CCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHH
Q ss_conf             34009868866083888889983768828899999748909998099899999999852148852771132788987653
Q gi|255764511|r   21 VPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVP  100 (341)
Q Consensus        21 ~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~  100 (341)
                      .+-+-+++++.|.++||..++|-=.|.|..+..+.+.+++|+|+|.++.++..|++++.    ++.+..+++.++.   .
T Consensus        42 ~~~~~~~ll~~l~~~~g~~VLDiGcG~G~~~~~la~~~~~v~giD~s~~ml~~a~~~~~----~~~~~~~~~~~~~---~  114 (279)
T 3ccf_A           42 VWQYGEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNYP----HLHFDVADARNFR---V  114 (279)
T ss_dssp             CSSSCCHHHHHHCCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TSCEEECCTTTCC---C
T ss_pred             HHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECHHHHHHHHHHHCC----CCCEEEHHHCCCC---C
T ss_conf             79999999970699996999993585859999999649989999163889999986165----4311100000135---6


Q ss_pred             HCCCCEEEEECCCHHHHHHHHHHCCC
Q ss_conf             12332478622520788876540734
Q gi|255764511|r  101 DKGVDGVVFDLGVSSMQIDCGDRGFS  126 (341)
Q Consensus       101 ~~~vdgIl~DLGvSS~Qld~~~RGFS  126 (341)
                      +..+|.|+.-..  .+++.++.+.+.
T Consensus       115 ~~~fD~v~~~~~--l~~~~d~~~~l~  138 (279)
T 3ccf_A          115 DKPLDAVFSNAM--LHWVKEPEAAIA  138 (279)
T ss_dssp             SSCEEEEEEESC--GGGCSCHHHHHH
T ss_pred             CCCCCEEEEEEC--CCCCCCHHHHHH
T ss_conf             765538977520--145678899999


No 36 
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxylating); porphyrin metabolism, S-adenosyl-methionine, structural genomics; 1.80A {Geobacter metallireducens gs-15}
Probab=97.73  E-value=0.00022  Score=47.55  Aligned_cols=66  Identities=17%  Similarity=0.271  Sum_probs=53.5

Q ss_pred             HHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHH
Q ss_conf             8866083888889983768828899999748--909998099899999999852148-85277113278
Q gi|255764511|r   28 VIALLNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFS   93 (341)
Q Consensus        28 vl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~   93 (341)
                      +++.|.+.||..++|.=.|.|..|.++....  ++|+|+|+|++++..++++++.++ .++.++++...
T Consensus        32 ~l~~L~l~pg~~VLDiG~GsG~la~~~a~~~~~~~V~aiD~~~~~~~~a~~n~~~~g~~~~~~~~g~~~  100 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAP  100 (204)
T ss_dssp             HHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTT
T ss_pred             HHHHCCCCCCCEEEEEEEEHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf             998609999399999831078999999997899679999499999999999999819985899734532


No 37 
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=97.72  E-value=0.00017  Score=48.33  Aligned_cols=87  Identities=15%  Similarity=0.212  Sum_probs=70.9

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH-CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHH
Q ss_conf             33400986886608388888998376882889999974-890999809989999999985214--885277113278898
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM-GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQ   96 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~-~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~   96 (341)
                      -.|-.+..+.+.+.++||..++|.=.|.|+.+..+.+. +.+++|+|.++.++..++++.+..  .+++.+.++.+.++ 
T Consensus        20 ~~~~~~~~l~~~l~l~pg~rVLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~gl~~~v~~~~~d~~~~-   98 (256)
T 1nkv_A           20 FTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-   98 (256)
T ss_dssp             CCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-
T ss_pred             CCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHC-
T ss_conf             8899999999970899999999985888889999998649989999898367789988677606554444113636450-


Q ss_pred             HHHHHCCCCEEEE
Q ss_conf             7653123324786
Q gi|255764511|r   97 DYVPDKGVDGVVF  109 (341)
Q Consensus        97 ~~l~~~~vdgIl~  109 (341)
                        .....+|.|+.
T Consensus        99 --~~~~~fD~v~~  109 (256)
T 1nkv_A           99 --VANEKCDVAAC  109 (256)
T ss_dssp             --CCSSCEEEEEE
T ss_pred             --CCCCCEEEEEE
T ss_conf             --56784469999


No 38 
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransferase posttranslational modification; 1.59A {Thermus thermophilus HB8} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.71  E-value=0.00037  Score=46.14  Aligned_cols=96  Identities=19%  Similarity=0.313  Sum_probs=68.2

Q ss_pred             HHHCCCCCCCC--CCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             11011607833--4009868866083888889983768828899999748909998099899999999852148852771
Q gi|255764511|r   11 SAIHHTIGDHV--PVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLF   88 (341)
Q Consensus        11 ~~~~~~~~~H~--PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~   88 (341)
                      ..|+--++.|-  --||+.+.+.  ..++..++|.=.|.|-.+.+..+.+.+|+|+|.||.|+..|+++.+..+-+..++
T Consensus        95 pg~aFGTG~H~TT~l~l~~l~~~--~~~g~~VLDvGcGsGiLsi~aak~G~~V~aiDid~~av~~a~~N~~~N~v~~~~~  172 (254)
T 2nxc_A           95 PGMAFGTGHHETTRLALKALARH--LRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFL  172 (254)
T ss_dssp             CC-----CCSHHHHHHHHHHHHH--CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEE
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHH--CCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEE
T ss_conf             88767799988999999999841--7997989997177788899998459989999887278899999899709944999


Q ss_pred             CCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf             13278898765312332478622
Q gi|255764511|r   89 QATFSQLQDYVPDKGVDGVVFDL  111 (341)
Q Consensus        89 ~~~F~~i~~~l~~~~vdgIl~DL  111 (341)
                      +++..+   ......+|.|++++
T Consensus       173 ~~~~~~---~~~~~~fDlIvaNi  192 (254)
T 2nxc_A          173 EGSLEA---ALPFGPFDLLVANL  192 (254)
T ss_dssp             ESCHHH---HGGGCCEEEEEEEC
T ss_pred             ECCHHH---CCCCCCCCEEEEEE
T ss_conf             874345---16457866899981


No 39 
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus HB8} SCOP: c.66.1.46
Probab=97.70  E-value=0.00048  Score=45.37  Aligned_cols=93  Identities=17%  Similarity=0.153  Sum_probs=67.6

Q ss_pred             CCCCHHHHHH-HHH--CCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHH
Q ss_conf             3340098688-660--8388888998376882889999974890999809989999999985214885277113278898
Q gi|255764511|r   20 HVPVLLEKVI-ALL--NPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQ   96 (341)
Q Consensus        20 H~PVll~Evl-~~l--~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~   96 (341)
                      -.|-++.|.+ +.|  ...+++.++|+--|.|..+.+.+..+.+++++|.|++|+..+++.++..+-.-.+.........
T Consensus        22 pt~~~vre~~f~~l~~~~~~~~~vLDl~~G~G~~~i~a~~~ga~vv~vD~~~~ai~~~~~N~~~~g~~~~v~~~~~d~~~  101 (171)
T 1ws6_A           22 PSPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFL  101 (171)
T ss_dssp             CCCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHCCCCCEEEEEEHHHHH
T ss_conf             67489999999997364579798999620678999999980895300606878999999878860665559997789875


Q ss_pred             HH--HHHCCCCEEEEECC
Q ss_conf             76--53123324786225
Q gi|255764511|r   97 DY--VPDKGVDGVVFDLG  112 (341)
Q Consensus        97 ~~--l~~~~vdgIl~DLG  112 (341)
                      ..  .....+|-|++|-=
T Consensus       102 ~~~~~~~~~fDlI~~DPP  119 (171)
T 1ws6_A          102 PEAKAQGERFTVAFMAPP  119 (171)
T ss_dssp             HHHHHTTCCEEEEEECCC
T ss_pred             HHHHHCCCCEEEEEECCC
T ss_conf             555533885579998799


No 40 
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=97.69  E-value=0.00014  Score=48.93  Aligned_cols=88  Identities=16%  Similarity=0.128  Sum_probs=65.6

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH
Q ss_conf             33400986886608388888998376882889999974890999809989999999985214885277113278898765
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYV   99 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l   99 (341)
                      |..-...+++..+...+++.++|.-.|.|.++..+.+.+.+|+|+|.++.++..++++....+.++.+...+.....   
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~g~~v~gvD~s~~~i~~a~~~~~~~~~~~~~~~~d~~~~~---  180 (286)
T 3m70_A          104 NTTAIHGDVVDAAKIISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAAN---  180 (286)
T ss_dssp             CCCCCCHHHHHHHHHSCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCC---
T ss_pred             CCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECHHHHHC---
T ss_conf             66314899998588899697999837798999999858997999989889999999865422662024440022110---


Q ss_pred             HHCCCCEEEEE
Q ss_conf             31233247862
Q gi|255764511|r  100 PDKGVDGVVFD  110 (341)
Q Consensus       100 ~~~~vdgIl~D  110 (341)
                      ....+|.|+..
T Consensus       181 ~~~~fD~I~~~  191 (286)
T 3m70_A          181 IQENYDFIVST  191 (286)
T ss_dssp             CCSCEEEEEEC
T ss_pred             CCCCCCEEEEE
T ss_conf             13567578786


No 41 
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.67  E-value=0.00038  Score=46.08  Aligned_cols=92  Identities=17%  Similarity=0.319  Sum_probs=74.8

Q ss_pred             CCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHH-H-CCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHH
Q ss_conf             340098688660838888899837688288999997-4-8909998099899999999852148-852771132788987
Q gi|255764511|r   21 VPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCK-M-GSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQD   97 (341)
Q Consensus        21 ~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~-~-~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~   97 (341)
                      .|=|+-.+++.|++++|..++|-=-|.|.-| ++|. . +++|+++|+|++.+..|+++++.++ .++.+.+++..+.  
T Consensus        76 ~P~~~A~ml~~L~l~~g~~VLeIGsGtGy~t-a~la~l~g~~V~~IE~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g--  152 (235)
T 1jg1_A           76 APHMVAIMLEIANLKPGMNILEVGTGSGWNA-ALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG--  152 (235)
T ss_dssp             CHHHHHHHHHHHTCCTTCCEEEECCTTSHHH-HHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC--
T ss_pred             HHHHHHHHHHHCCCCCCCEEEEECCCCCHHH-HHHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCC--
T ss_conf             6899999999704899987999478876789-9999864973999962889999999999980997169998870016--


Q ss_pred             HHHHCCCCEEEEECCCHH
Q ss_conf             653123324786225207
Q gi|255764511|r   98 YVPDKGVDGVVFDLGVSS  115 (341)
Q Consensus        98 ~l~~~~vdgIl~DLGvSS  115 (341)
                      ......+|.|+...++..
T Consensus       153 ~~~~~~fD~I~v~~a~~~  170 (235)
T 1jg1_A          153 FPPKAPYDVIIVTAGAPK  170 (235)
T ss_dssp             CGGGCCEEEEEECSBBSS
T ss_pred             CCCCCCCCEEEEECCHHH
T ss_conf             665576343676146554


No 42 
>3ege_A Putative methyltransferase from antibiotic biosynthesis pathway; YP_324569.1, structural genomics; 2.40A {Anabaena variabilis atcc 29413}
Probab=97.64  E-value=3.2e-05  Score=52.99  Aligned_cols=118  Identities=25%  Similarity=0.331  Sum_probs=87.1

Q ss_pred             CHHHCCCCCC---CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEE
Q ss_conf             0110116078---3340098688660838888899837688288999997489099980998999999998521488527
Q gi|255764511|r   10 SSAIHHTIGD---HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFS   86 (341)
Q Consensus        10 ~~~~~~~~~~---H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~   86 (341)
                      =..+......   ..|-...++++.|.+.++..++|.-.|.|..+..+.+.+.+|+|+|..+.+++.++.     ..++.
T Consensus         5 y~~~a~~Y~~~r~~~~~~~~~~~~~l~l~~~~~vLDvGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~-----~~~~~   79 (261)
T 3ege_A            5 YNSIGKQYSQTRVPDIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVV-----HPQVE   79 (261)
T ss_dssp             --------CCSBCCCHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCC-----CTTEE
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCC-----CCCHH
T ss_conf             8899989877277888999999996599996999996488889999999769989999744531210001-----22101


Q ss_pred             EECCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCC-----CCCCCCEECC
Q ss_conf             7113278898765312332478622520788876540734-----4566410104
Q gi|255764511|r   87 LFQATFSQLQDYVPDKGVDGVVFDLGVSSMQIDCGDRGFS-----FQKSGPLDMR  136 (341)
Q Consensus        87 ~~~~~F~~i~~~l~~~~vdgIl~DLGvSS~Qld~~~RGFS-----f~~dgpLDMR  136 (341)
                      ++.+.+.++.  ++...+|.|+.-.  +.+++++++..+.     .+.+|.|=+-
T Consensus        80 ~~~~d~~~l~--~~~~~fD~v~~~~--~l~~~~d~~~~l~e~~r~LkpgG~l~~~  130 (261)
T 3ege_A           80 WFTGYAENLA--LPDKSVDGVISIL--AIHHFSHLEKSFQEMQRIIRDGTIVLLT  130 (261)
T ss_dssp             EECCCTTSCC--SCTTCBSEEEEES--CGGGCSSHHHHHHHHHHHBCSSCEEEEE
T ss_pred             HHHHHHHHCC--CCCCCCCEEEECC--HHHHCCCHHHHHHHHHHHCCCCCEEEEE
T ss_conf             3334454302--5676013775401--2774689999999999982818589999


No 43 
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly, inter-subunit disulfide bridge; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.63  E-value=0.00056  Score=44.94  Aligned_cols=92  Identities=16%  Similarity=0.200  Sum_probs=70.8

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHH-HCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHH
Q ss_conf             3340098688660838888899837688288999997-489099980998999999998521488527711327889876
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCK-MGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDY   98 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~-~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~   98 (341)
                      -.|-|.-.+++.|++++|..++|---|.|..| ++|. ..++|+++|.|++.+..|++++..+ .++.+.+++-..  .+
T Consensus        54 s~p~~~a~~l~~L~l~~g~~VLeIG~GsGy~t-a~La~l~~~V~~vE~~~~~~~~A~~~~~~~-~nv~~~~gDg~~--g~  129 (231)
T 1vbf_A           54 TALNLGIFMLDELDLHKGQKVLEIGTGIGYYT-ALIAEIVDKVVSVEINEKMYNYASKLLSYY-NNIKLILGDGTL--GY  129 (231)
T ss_dssp             CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHH-HHHHHHSSEEEEEESCHHHHHHHHHHHTTC-SSEEEEESCGGG--CC
T ss_pred             CCHHHHHHHHHHCCCCCCCEEEEECCCCCHHH-HHHHHHCCEEEEECCCHHHHHHHHHHHCCC-CEEEEEECCHHC--CC
T ss_conf             14899999999718999798999779877889-999985678767628999999999874068-626898663202--87


Q ss_pred             HHHCCCCEEEEECCCHH
Q ss_conf             53123324786225207
Q gi|255764511|r   99 VPDKGVDGVVFDLGVSS  115 (341)
Q Consensus        99 l~~~~vdgIl~DLGvSS  115 (341)
                      .....+|.|+..-++..
T Consensus       130 ~~~~pfD~Iiv~~~~~~  146 (231)
T 1vbf_A          130 EEEKPYDRVVVWATAPT  146 (231)
T ss_dssp             GGGCCEEEEEESSBBSS
T ss_pred             CCCCCEEEEEECCCHHH
T ss_conf             34698579998575788


No 44 
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.63  E-value=0.00032  Score=46.55  Aligned_cols=80  Identities=13%  Similarity=0.223  Sum_probs=65.6

Q ss_pred             CCCCCEEEECCCCCCHHHHHHHHHC-CEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHHHHHHHCCCCEEEEE
Q ss_conf             3888889983768828899999748-90999809989999999985214--88527711327889876531233247862
Q gi|255764511|r   34 PAPGKVILDATFGAGGYSRSFCKMG-SNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQDYVPDKGVDGVVFD  110 (341)
Q Consensus        34 ~~~~g~~iD~TlG~GGHS~~iL~~~-~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~~~l~~~~vdgIl~D  110 (341)
                      +.+++.++|.-.|.|.=+.++.+.. ++|+|+|.|+++++.|+++++..  .+++.+++++..++.+.++...+|-|+.|
T Consensus        47 ~~~~~~vLDlG~G~G~~~l~la~~~~~~v~~vDi~~~~~~~A~~N~~~n~l~~~v~~~~~D~~~~~~~~~~~~fD~Iv~N  126 (259)
T 3lpm_A           47 PIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCN  126 (259)
T ss_dssp             CSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEEC
T ss_pred             CCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHEEEEHHHHHHHHCCCCCCCCEEEEC
T ss_conf             66799799972585899999986789889999998999999999998607330112330011100010355425478857


Q ss_pred             CCC
Q ss_conf             252
Q gi|255764511|r  111 LGV  113 (341)
Q Consensus       111 LGv  113 (341)
                      .-|
T Consensus       127 PPy  129 (259)
T 3lpm_A          127 PPY  129 (259)
T ss_dssp             CCC
T ss_pred             CCC
T ss_conf             885


No 45 
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=97.63  E-value=0.00013  Score=49.02  Aligned_cols=99  Identities=15%  Similarity=0.120  Sum_probs=77.1

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH-CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHHHHHH
Q ss_conf             0986886608388888998376882889999974-890999809989999999985214--8852771132788987653
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM-GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQDYVP  100 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~-~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~~~l~  100 (341)
                      |+..+.....+.++..++|.=.|.|+.+..+.+. +.+|+|+|.++.++..|+++....  .+++.+..+++.++.  .+
T Consensus        70 ~~~~l~~~~~l~~~~~VLDiGCG~G~~~~~la~~~g~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~--~~  147 (297)
T 2o57_A           70 LASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP--CE  147 (297)
T ss_dssp             HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS--SC
T ss_pred             HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC--CC
T ss_conf             9999998469899998999889999899999996398599996742778888764432056766227861222567--66


Q ss_pred             HCCCCEEEEECCCHHHHHHHHHHCCC
Q ss_conf             12332478622520788876540734
Q gi|255764511|r  101 DKGVDGVVFDLGVSSMQIDCGDRGFS  126 (341)
Q Consensus       101 ~~~vdgIl~DLGvSS~Qld~~~RGFS  126 (341)
                      ...+|.|+.--  +.+++.|+.+-|.
T Consensus       148 ~~~fD~V~~~~--~l~h~~d~~~~l~  171 (297)
T 2o57_A          148 DNSYDFIWSQD--AFLHSPDKLKVFQ  171 (297)
T ss_dssp             TTCEEEEEEES--CGGGCSCHHHHHH
T ss_pred             CCCEEEEEECC--CHHHCCCHHHHHH
T ss_conf             65110999857--2442379999999


No 46 
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} SCOP: c.66.1.47 PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.60  E-value=0.00048  Score=45.42  Aligned_cols=93  Identities=17%  Similarity=0.332  Sum_probs=70.4

Q ss_pred             CCCCCHHHHHHHHHC-CCCCCEEEECCCCCCHHHHHHHHHC-CEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHH
Q ss_conf             833400986886608-3888889983768828899999748-90999809989999999985214--8852771132788
Q gi|255764511|r   19 DHVPVLLEKVIALLN-PAPGKVILDATFGAGGYSRSFCKMG-SNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQ   94 (341)
Q Consensus        19 ~H~PVll~Evl~~l~-~~~~g~~iD~TlG~GGHS~~iL~~~-~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~   94 (341)
                      +..|-+..|-..... ..+|..++|+--|.|+-|..+++.+ .+|+|+|.+|.|+..++++.+..  .+++.+++++..+
T Consensus       107 ~f~~~~~~er~rl~~~~~~g~~VlDl~aG~G~~~l~~a~~~~~~V~avD~n~~a~~~~~~N~~~n~~~~~v~~~~~D~~~  186 (278)
T 2frn_A          107 MFSPANVKERVRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRD  186 (278)
T ss_dssp             CCCGGGHHHHHHHHHHCCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTT
T ss_pred             EECCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCHHH
T ss_conf             24587367999999653699889991770519999999974986999979999999999999980999848999681999


Q ss_pred             HHHHHHHCCCCEEEEECCCH
Q ss_conf             98765312332478622520
Q gi|255764511|r   95 LQDYVPDKGVDGVVFDLGVS  114 (341)
Q Consensus        95 i~~~l~~~~vdgIl~DLGvS  114 (341)
                      +   .....+|.|++++-.+
T Consensus       187 ~---~~~~~~D~Vim~~p~~  203 (278)
T 2frn_A          187 F---PGENIADRILMGYVVR  203 (278)
T ss_dssp             C---CCCSCEEEEEECCCSS
T ss_pred             H---CCCCCCCEEEECCCCC
T ss_conf             4---4666886999899852


No 47 
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.59  E-value=0.00016  Score=48.40  Aligned_cols=91  Identities=14%  Similarity=0.255  Sum_probs=73.0

Q ss_pred             HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCC
Q ss_conf             98688660838888899837688288999997489099980998999999998521488527711327889876531233
Q gi|255764511|r   25 LEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGV  104 (341)
Q Consensus        25 l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~v  104 (341)
                      .+++|+.+.+.+++.++|.=.|.|..+..+++.+.+++|+|..+.+++.|++++.   +.+.++++.+.++.  + ...+
T Consensus        34 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~S~~mi~~a~~k~~---~~~~~~~~d~~~~~--~-~~~f  107 (220)
T 3hnr_A           34 YEDILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSFE--V-PTSI  107 (220)
T ss_dssp             HHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSCC--C-CSCC
T ss_pred             HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC---CCCHHHHHHHHHHC--C-CCCC
T ss_conf             9999998426697939997287859999999779989999583577899874256---54103344454440--1-7764


Q ss_pred             CEEEEECCCHHHHHHHHHH
Q ss_conf             2478622520788876540
Q gi|255764511|r  105 DGVVFDLGVSSMQIDCGDR  123 (341)
Q Consensus       105 dgIl~DLGvSS~Qld~~~R  123 (341)
                      |.|+.-..  -+++.++++
T Consensus       108 D~I~~~~~--l~h~~~~~~  124 (220)
T 3hnr_A          108 DTIVSTYA--FHHLTDDEK  124 (220)
T ss_dssp             SEEEEESC--GGGSCHHHH
T ss_pred             CEEEEHHH--HHHCCCHHH
T ss_conf             88976344--885993789


No 48 
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A
Probab=97.58  E-value=0.00031  Score=46.62  Aligned_cols=94  Identities=16%  Similarity=0.223  Sum_probs=70.7

Q ss_pred             HHHHHHCC-CCCCEEEECCCCCCHHHHHHHHH-CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHHHHHHHC
Q ss_conf             68866083-88888998376882889999974-890999809989999999985214--885277113278898765312
Q gi|255764511|r   27 KVIALLNP-APGKVILDATFGAGGYSRSFCKM-GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQDYVPDK  102 (341)
Q Consensus        27 Evl~~l~~-~~~g~~iD~TlG~GGHS~~iL~~-~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~~~l~~~  102 (341)
                      .+++.+.. .++..++|-=.|.|+.|..+.+. +++|+|+|.++.++..|+++..+.  .+++.++++++.++.  .+..
T Consensus        36 ~~l~~l~~l~~~~~VLDIGCG~G~~~~~lA~~~~~~V~giD~s~~~l~~a~~~~~~~~l~~~v~~~~~d~~~l~--~~~~  113 (267)
T 3kkz_A           36 KALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP--FRNE  113 (267)
T ss_dssp             HHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--CCTT
T ss_pred             HHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCC--CCCC
T ss_conf             99981727999998999627897999999974799899997973165898873232344433100100123567--7888


Q ss_pred             CCCEEEEECCCHHHHHHHHHHCC
Q ss_conf             33247862252078887654073
Q gi|255764511|r  103 GVDGVVFDLGVSSMQIDCGDRGF  125 (341)
Q Consensus       103 ~vdgIl~DLGvSS~Qld~~~RGF  125 (341)
                      .+|.|+.-..+  +.+ +.++.|
T Consensus       114 ~FD~I~s~~~l--~~~-~~~~~l  133 (267)
T 3kkz_A          114 ELDLIWSEGAI--YNI-GFERGL  133 (267)
T ss_dssp             CEEEEEESSCG--GGT-CHHHHH
T ss_pred             CEEEEEECHHH--HHC-CHHHHH
T ss_conf             46689740437--838-989999


No 49 
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.53  E-value=0.00035  Score=46.25  Aligned_cols=89  Identities=18%  Similarity=0.243  Sum_probs=67.0

Q ss_pred             HHHHHCCCCCCEEEECCCCCCHHHHHHHHH--CCEEEEECCCHHHHHHHHHHHHHCCCC-EEEECCCHHHHHHHHHHCCC
Q ss_conf             886608388888998376882889999974--890999809989999999985214885-27711327889876531233
Q gi|255764511|r   28 VIALLNPAPGKVILDATFGAGGYSRSFCKM--GSNVIALDRDPFAVSCGQETMRDYKEQ-FSLFQATFSQLQDYVPDKGV  104 (341)
Q Consensus        28 vl~~l~~~~~g~~iD~TlG~GGHS~~iL~~--~~~liaiDrD~~ai~~a~~~l~~~~~r-~~~~~~~F~~i~~~l~~~~v  104 (341)
                      +...+.|.++..++|+.-|.||.|..+...  .+.++|.|.++.-+...++++...+-. ......... .........+
T Consensus       238 ~~~~l~~~~~~~VLD~CAaPGgKt~~la~~~~~~~i~a~d~~~~r~~~l~~~~~r~g~~~~~~~~~~~~-~~~~~~~~~f  316 (429)
T 1sqg_A          238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY-PSQWCGEQQF  316 (429)
T ss_dssp             HHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTC-THHHHTTCCE
T ss_pred             HHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCCEEECCCCCC-CHHHCCCCCC
T ss_conf             776218421441456068804899999986222465622342677888877786416431110234433-1010354566


Q ss_pred             CEEEEECCCHHHH
Q ss_conf             2478622520788
Q gi|255764511|r  105 DGVVFDLGVSSMQ  117 (341)
Q Consensus       105 dgIl~DLGvSS~Q  117 (341)
                      |.||.|-=.|..=
T Consensus       317 D~VLlDaPCSg~G  329 (429)
T 1sqg_A          317 DRILLDAPCSATG  329 (429)
T ss_dssp             EEEEEECCCCCGG
T ss_pred             CEEEEECCCCCCC
T ss_conf             4599707604684


No 50 
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii OT3}
Probab=97.53  E-value=0.00033  Score=46.46  Aligned_cols=88  Identities=16%  Similarity=0.321  Sum_probs=70.7

Q ss_pred             HHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHHHCC
Q ss_conf             886608388888998376882889999974---8909998099899999999852148-852771132788987653123
Q gi|255764511|r   28 VIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVPDKG  103 (341)
Q Consensus        28 vl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~~~~  103 (341)
                      +...|.+.+|..++|+--|-||.|..+.+.   .+.++|.|.++.-+....+++...+ .++...........+......
T Consensus       251 ~~~~L~~~~g~~VLD~CAaPGGKT~~la~~~~~~~~i~a~d~~~~rl~~l~~~l~r~g~~~v~~~~~d~~~~~~~~~~~~  330 (450)
T 2yxl_A          251 ASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEV  330 (450)
T ss_dssp             HHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSC
T ss_pred             HHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCC
T ss_conf             89873457898587506886579999999865138503112548778778999997087631676133010643235565


Q ss_pred             CCEEEEECCCHH
Q ss_conf             324786225207
Q gi|255764511|r  104 VDGVVFDLGVSS  115 (341)
Q Consensus       104 vdgIl~DLGvSS  115 (341)
                      +|.||.|-=.|+
T Consensus       331 fD~ILvDaPCSg  342 (450)
T 2yxl_A          331 ADKVLLDAPCTS  342 (450)
T ss_dssp             EEEEEEECCCCC
T ss_pred             CCEEEECCCCCC
T ss_conf             766985188889


No 51 
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.51  E-value=0.00045  Score=45.58  Aligned_cols=82  Identities=22%  Similarity=0.313  Sum_probs=64.4

Q ss_pred             HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCC
Q ss_conf             98688660838888899837688288999997489099980998999999998521488527711327889876531233
Q gi|255764511|r   25 LEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGV  104 (341)
Q Consensus        25 l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~v  104 (341)
                      ++++++-. ..+++.++|-=.|.|.+|..+.+.+.+|+|+|..++++..|+++....+..+.+++++..++.  ++...+
T Consensus        28 l~~~~~~~-~~~~~rVLDiGCG~G~~~~~la~~~~~v~g~D~s~~~l~~ak~~~~~~~~~~~~~~~d~~~l~--~~~~sf  104 (227)
T 1ve3_A           28 LEPLLMKY-MKKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS--FEDKTF  104 (227)
T ss_dssp             HHHHHHHS-CCSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC--SCTTCE
T ss_pred             HHHHHHHH-CCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCEE
T ss_conf             99999984-799897999868888999999965998999967504689999988752765333346533488--767705


Q ss_pred             CEEEE
Q ss_conf             24786
Q gi|255764511|r  105 DGVVF  109 (341)
Q Consensus       105 dgIl~  109 (341)
                      |.|+.
T Consensus       105 D~V~~  109 (227)
T 1ve3_A          105 DYVIF  109 (227)
T ss_dssp             EEEEE
T ss_pred             EEEEE
T ss_conf             89986


No 52 
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=97.49  E-value=0.0016  Score=41.95  Aligned_cols=87  Identities=17%  Similarity=0.159  Sum_probs=70.0

Q ss_pred             HHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHHHCC
Q ss_conf             886608388888998376882889999974---8909998099899999999852148-852771132788987653123
Q gi|255764511|r   28 VIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVPDKG  103 (341)
Q Consensus        28 vl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~~~~  103 (341)
                      +...|.+++|..++|+--|-||-|..|.+.   .+.|+|.|.++.-+....++++.++ .++.+.+.....+..... ..
T Consensus        97 ~~~~L~~~pg~~VLDlCAAPGgKt~~la~~l~~~g~l~a~d~~~~R~~~l~~nl~r~g~~n~~v~~~d~~~~~~~~~-~~  175 (456)
T 3m4x_A           97 VGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFS-GF  175 (456)
T ss_dssp             HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHT-TC
T ss_pred             HHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC-CC
T ss_conf             99970999999898816786479999999700897588630646777899876875278748999325443552124-65


Q ss_pred             CCEEEEECCCHH
Q ss_conf             324786225207
Q gi|255764511|r  104 VDGVVFDLGVSS  115 (341)
Q Consensus       104 vdgIl~DLGvSS  115 (341)
                      +|.||.|-=.|.
T Consensus       176 fD~VLvDaPCSG  187 (456)
T 3m4x_A          176 FDRIVVDAPCSG  187 (456)
T ss_dssp             EEEEEEECCCCC
T ss_pred             CCEEEECCCCCC
T ss_conf             557997487677


No 53 
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=97.49  E-value=0.00049  Score=45.34  Aligned_cols=90  Identities=18%  Similarity=0.357  Sum_probs=70.4

Q ss_pred             CCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHC-CCCEEEECCCHHHHH-HH
Q ss_conf             3400986886608388888998376882889999974890999809989999999985214-885277113278898-76
Q gi|255764511|r   21 VPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDY-KEQFSLFQATFSQLQ-DY   98 (341)
Q Consensus        21 ~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~-~~r~~~~~~~F~~i~-~~   98 (341)
                      ...|++.+++++.+.++..++|.=-|.|..|..+.+...+|+|+|.+++|+..|++..+.. -+++.|++++..... ..
T Consensus       271 ~~~l~~~v~~~l~~~~~~~vlDLYcG~G~fsl~La~~~~~V~gvE~~~~Av~~A~~na~~n~~~n~~f~~~~~~~~~~~~  350 (433)
T 1uwv_A          271 NQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQ  350 (433)
T ss_dssp             HHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSS
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHH
T ss_conf             99999999998445688779995688517778766505624566354999999999999849975699914756664430


Q ss_pred             -HHHCCCCEEEEE
Q ss_conf             -531233247862
Q gi|255764511|r   99 -VPDKGVDGVVFD  110 (341)
Q Consensus        99 -l~~~~vdgIl~D  110 (341)
                       ....++|.|++|
T Consensus       351 ~~~~~~~d~vilD  363 (433)
T 1uwv_A          351 PWAKNGFDKVLLD  363 (433)
T ss_dssp             GGGTTCCSEEEEC
T ss_pred             HHHCCCCCEEEEC
T ss_conf             6652799989989


No 54 
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.44  E-value=0.00069  Score=44.36  Aligned_cols=84  Identities=12%  Similarity=0.036  Sum_probs=65.6

Q ss_pred             HHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHH-HCC
Q ss_conf             886608388888998376882889999974---8909998099899999999852148852771132788987653-123
Q gi|255764511|r   28 VIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVP-DKG  103 (341)
Q Consensus        28 vl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~-~~~  103 (341)
                      -++.+.++||..++|.-.|.|..+..+.+.   +++|||+|.+|.++..++++..+. .++.++.........+.. ...
T Consensus        69 ~l~~l~lkpG~~VLDlG~G~G~~~~~la~~vg~~G~V~aVD~s~~~l~~a~~~a~~~-~ni~~i~~d~~~~~~~~~~~~~  147 (233)
T 2ipx_A           69 GVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAM  147 (233)
T ss_dssp             TCSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCC
T ss_pred             CHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHC-CCCCEEEEECCCCHHCCCCCCE
T ss_conf             555259999999999657689899999998599967999979999999999975514-6664289753670111566526


Q ss_pred             CCEEEEECC
Q ss_conf             324786225
Q gi|255764511|r  104 VDGVVFDLG  112 (341)
Q Consensus       104 vdgIl~DLG  112 (341)
                      ||.|+.|+.
T Consensus       148 vd~i~~~~~  156 (233)
T 2ipx_A          148 VDVIFADVA  156 (233)
T ss_dssp             EEEEEECCC
T ss_pred             EEEEECCCC
T ss_conf             888531422


No 55 
>2esr_A Methyltransferase; structural genomics, hypothetical protein, PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes MGAS10394} SCOP: c.66.1.46
Probab=97.43  E-value=0.0028  Score=40.41  Aligned_cols=89  Identities=18%  Similarity=0.264  Sum_probs=68.9

Q ss_pred             HHHHH-HHHHCC-CCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHHHH
Q ss_conf             09868-866083-8888899837688288999997489-0999809989999999985214--88527711327889876
Q gi|255764511|r   24 LLEKV-IALLNP-APGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQDY   98 (341)
Q Consensus        24 ll~Ev-l~~l~~-~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~~~   98 (341)
                      .++|. .+.|.. ..|..++|.--|.|.-+...+..+. +|+++|.|++|+..+++.++..  .+++.+++++..+..+.
T Consensus        17 ~vre~lfn~L~~~~~g~~vLDl~~GsG~~~iea~~r~a~~v~~ve~~~~a~~~~~~n~~~~~~~~~v~ii~~D~~~~l~~   96 (177)
T 2esr_A           17 KVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDC   96 (177)
T ss_dssp             -CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCEEHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHC
T ss_conf             99999999877556989799995037999999997386201678342889998887576513555102453115555431


Q ss_pred             HHHCCCCEEEEECCC
Q ss_conf             531233247862252
Q gi|255764511|r   99 VPDKGVDGVVFDLGV  113 (341)
Q Consensus        99 l~~~~vdgIl~DLGv  113 (341)
                      +. ..+|-|++|.=+
T Consensus        97 ~~-~~fDiI~~DPPy  110 (177)
T 2esr_A           97 LT-GRFDLVFLDPPY  110 (177)
T ss_dssp             BC-SCEEEEEECCSS
T ss_pred             CC-CCCCEEEECCCC
T ss_conf             34-678868879974


No 56 
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.39  E-value=0.0016  Score=42.08  Aligned_cols=86  Identities=16%  Similarity=0.306  Sum_probs=68.1

Q ss_pred             HHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHHHCC
Q ss_conf             886608388888998376882889999974---8909998099899999999852148-852771132788987653123
Q gi|255764511|r   28 VIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVPDKG  103 (341)
Q Consensus        28 vl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~~~~  103 (341)
                      +...|.|++|..++|+.-|.||.|..+.+.   .+.++|.|.++.-+.....+++..+ .++...+..+..+..  ....
T Consensus       110 ~~~~L~~~~g~~vLD~CAaPGgKt~~l~~~~~~~g~i~a~d~~~~R~~~l~~~l~r~g~~~i~~~~~d~~~~~~--~~~~  187 (315)
T 1ixk_A          110 PPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE--LNVE  187 (315)
T ss_dssp             HHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG--GCCC
T ss_pred             HHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEECCCCHHCCC--CCCC
T ss_conf             76615899999288957771144665333126884478410788999999999987187652111243000012--3565


Q ss_pred             CCEEEEECCCHH
Q ss_conf             324786225207
Q gi|255764511|r  104 VDGVVFDLGVSS  115 (341)
Q Consensus       104 vdgIl~DLGvSS  115 (341)
                      +|.||.|-=.|+
T Consensus       188 fD~ILlDaPCSg  199 (315)
T 1ixk_A          188 FDKILLDAPCTG  199 (315)
T ss_dssp             EEEEEEECCTTS
T ss_pred             CCEEEEECCCCC
T ss_conf             437986176256


No 57 
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein, transferase; HET: TNA MTA; 1.66A {Methanothermobacterthermautotrophicus} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A*
Probab=97.39  E-value=0.002  Score=41.38  Aligned_cols=81  Identities=12%  Similarity=0.092  Sum_probs=62.9

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH--CCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHH
Q ss_conf             0986886608388888998376882889999974--8909998099899999999852148-852771132788987653
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM--GSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVP  100 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~--~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~  100 (341)
                      |.+-.++.+...++..++|.=-|.|+.|..++..  +.+|+|+|.||+++..|+++++..+ +++.+..++...+    +
T Consensus       110 l~~~e~~~~~l~~g~rVLdiGcG~g~~t~~~~a~~~g~~V~gIDisp~~~~~Ar~~~~~~g~~~v~~~~gD~~~l----~  185 (298)
T 3fpf_A          110 LLKNEAALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI----D  185 (298)
T ss_dssp             HHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG----G
T ss_pred             HHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCC----C
T ss_conf             999999854899999899960685699999998568998999969999999999979864995089997355447----8


Q ss_pred             HCCCCEEE
Q ss_conf             12332478
Q gi|255764511|r  101 DKGVDGVV  108 (341)
Q Consensus       101 ~~~vdgIl  108 (341)
                      ...+|.|+
T Consensus       186 ~~~fDvV~  193 (298)
T 3fpf_A          186 GLEFDVLM  193 (298)
T ss_dssp             GCCCSEEE
T ss_pred             CCCCCEEE
T ss_conf             99989899


No 58 
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.37  E-value=0.0019  Score=41.55  Aligned_cols=91  Identities=19%  Similarity=0.201  Sum_probs=61.8

Q ss_pred             CCCHHHHHHHHH--CCCCCCEEEECCCCCCHHHHHHHH-H---CCEEEEECCCHHHHHHHHHHHHHCC------CCEEEE
Q ss_conf             340098688660--838888899837688288999997-4---8909998099899999999852148------852771
Q gi|255764511|r   21 VPVLLEKVIALL--NPAPGKVILDATFGAGGYSRSFCK-M---GSNVIALDRDPFAVSCGQETMRDYK------EQFSLF   88 (341)
Q Consensus        21 ~PVll~Evl~~l--~~~~~g~~iD~TlG~GGHS~~iL~-~---~~~liaiDrD~~ai~~a~~~l~~~~------~r~~~~   88 (341)
                      .|-|.-.+++.|  .++||..++|.-.|.|--| ++|. .   .++|+++|++++.+..|++++....      .+..+.
T Consensus        60 ~P~~~a~~le~L~~~~~pg~~VLdiG~GsGy~t-a~la~lvg~~g~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~~~~~~  138 (226)
T 1i1n_A           60 APHMHAYALELLFDQLHEGAKALDVGSGSGILT-ACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLV  138 (226)
T ss_dssp             CHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHH-HHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEE
T ss_pred             HHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH-HHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEE
T ss_conf             889999999972530899998999778889999-9999970888649998688999999999986548643102346799


Q ss_pred             CCCHHHHHHHHHHCCCCEEEEECCCH
Q ss_conf             13278898765312332478622520
Q gi|255764511|r   89 QATFSQLQDYVPDKGVDGVVFDLGVS  114 (341)
Q Consensus        89 ~~~F~~i~~~l~~~~vdgIl~DLGvS  114 (341)
                      .++..+.  ......+|.|+.+.++.
T Consensus       139 ~gd~~~~--~~~~~~fD~I~~~~~~~  162 (226)
T 1i1n_A          139 VGDGRMG--YAEEAPYDAIHVGAAAP  162 (226)
T ss_dssp             ESCGGGC--CGGGCCEEEEEECSBBS
T ss_pred             ECCCCCC--CCCCCCEEEEEECCCHH
T ss_conf             6564566--65567601687526776


No 59 
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus HB8} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.35  E-value=0.0029  Score=40.39  Aligned_cols=88  Identities=23%  Similarity=0.259  Sum_probs=71.5

Q ss_pred             HHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCC
Q ss_conf             886608388888998376882889999974---89099980998999999998521488527711327889876531233
Q gi|255764511|r   28 VIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGV  104 (341)
Q Consensus        28 vl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~v  104 (341)
                      +...|.+++|..++|+--+-||.|..|.+.   .+.|+|.|.++.-+....++++.++-+..+.+..-..+..... ..+
T Consensus        93 ~~~~L~~~~g~~VLDlCAAPGGKt~~la~~l~~~g~l~and~~~~R~~~l~~nl~r~g~~~~v~~~d~~~l~~~~~-~~f  171 (464)
T 3m6w_A           93 VGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFG-TYF  171 (464)
T ss_dssp             HHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHC-SCE
T ss_pred             HHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCC-CCC
T ss_conf             9997299999979883658765599999885358357622431788888988888618861687232243320466-644


Q ss_pred             CEEEEECCCHHH
Q ss_conf             247862252078
Q gi|255764511|r  105 DGVVFDLGVSSM  116 (341)
Q Consensus       105 dgIl~DLGvSS~  116 (341)
                      |.||.|-=.|..
T Consensus       172 D~ILvDaPCSG~  183 (464)
T 3m6w_A          172 HRVLLDAPCSGE  183 (464)
T ss_dssp             EEEEEECCCCCG
T ss_pred             CEEEECCCCCCC
T ss_conf             379844876667


No 60 
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron}
Probab=97.33  E-value=0.001  Score=43.32  Aligned_cols=92  Identities=14%  Similarity=0.190  Sum_probs=72.9

Q ss_pred             CCCCHHHHHHHHHCCCCC-CEEEECCCCCCHHHHHHHHH-CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHH
Q ss_conf             334009868866083888-88998376882889999974-890999809989999999985214--88527711327889
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPG-KVILDATFGAGGYSRSFCKM-GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQL   95 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~-g~~iD~TlG~GGHS~~iL~~-~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i   95 (341)
                      .-|=.+.+.|+.+.+.++ ..++|-=.|.|..|..+.+. +.+|+|+|..+.++..|+++..+.  .+++.++++...++
T Consensus        29 g~~~~~~~~l~~l~~l~~~~rVLDlGCG~G~~~~~La~~~~~~v~gvD~S~~ml~~a~~~~~~~~~~~~v~~~~~d~~~l  108 (257)
T 3f4k_A           29 GSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL  108 (257)
T ss_dssp             CCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred             CCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             99999999998360799979799971779799999998669979999684567788898776432100001113038876


Q ss_pred             HHHHHHCCCCEEEEECCC
Q ss_conf             876531233247862252
Q gi|255764511|r   96 QDYVPDKGVDGVVFDLGV  113 (341)
Q Consensus        96 ~~~l~~~~vdgIl~DLGv  113 (341)
                      .  ++...+|.|+.-..+
T Consensus       109 ~--~~~~~fD~V~~~~~l  124 (257)
T 3f4k_A          109 P--FQNEELDLIWSEGAI  124 (257)
T ss_dssp             S--SCTTCEEEEEEESCS
T ss_pred             H--CCCCCCCEEEEHHHH
T ss_conf             2--368852189860547


No 61 
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.32  E-value=0.001  Score=43.35  Aligned_cols=70  Identities=11%  Similarity=0.104  Sum_probs=57.1

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHH
Q ss_conf             09868866083888889983768828899999748--909998099899999999852148-85277113278
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFS   93 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~   93 (341)
                      +..-+++.|.++||..++|.=.|.|..|..+....  ++|+|+|.|+++++.++++...++ .++.+++..+.
T Consensus        13 ~ra~~l~~L~~~pg~~vLDiGcG~G~~a~~~a~~~~~~~V~avD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~   85 (178)
T 3hm2_A           13 VRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAP   85 (178)
T ss_dssp             HHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTT
T ss_pred             HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf             9999998559999799999766888899999996897769885089999999999999819997899994362


No 62 
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.31  E-value=0.0027  Score=40.52  Aligned_cols=99  Identities=15%  Similarity=-0.017  Sum_probs=67.4

Q ss_pred             CCCCH---HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH--CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH
Q ss_conf             33400---986886608388888998376882889999974--8909998099899999999852148852771132788
Q gi|255764511|r   20 HVPVL---LEKVIALLNPAPGKVILDATFGAGGYSRSFCKM--GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ   94 (341)
Q Consensus        20 H~PVl---l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~--~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~   94 (341)
                      -.|++   ..+++..+  .+++.++|.=.|.|.++..+++.  ..+++|+|.++.++..|++++...+-...+.+.... 
T Consensus        32 r~~~l~~~~~~i~~~~--~~~~~VLDiGCG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~-  108 (200)
T 3fzg_A           32 RVATLNDFYTYVFGNI--KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKE-  108 (200)
T ss_dssp             TGGGHHHHHHHHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCH-
T ss_pred             HHHHHHHHHHHHHHHC--CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECHH-
T ss_conf             7999999999999528--9998799958867877999998789978999859999999998510232885156651013-


Q ss_pred             HHHHHHHCCCCEEEEECCCHHHHHHHHHHCC
Q ss_conf             9876531233247862252078887654073
Q gi|255764511|r   95 LQDYVPDKGVDGVVFDLGVSSMQIDCGDRGF  125 (341)
Q Consensus        95 i~~~l~~~~vdgIl~DLGvSS~Qld~~~RGF  125 (341)
                        .......+|.|+.--  .-++++++.+++
T Consensus       109 --~~~~~~~fD~i~~~~--~l~~~~~~~~~l  135 (200)
T 3fzg_A          109 --SDVYKGTYDVVFLLK--MLPVLKQQDVNI  135 (200)
T ss_dssp             --HHHTTSEEEEEEEET--CHHHHHHTTCCH
T ss_pred             --HHCCCCCCCEEEECC--CHHCCCCHHHHH
T ss_conf             --334478969898738--332378899999


No 63 
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.30  E-value=0.0015  Score=42.21  Aligned_cols=92  Identities=17%  Similarity=0.170  Sum_probs=69.6

Q ss_pred             CHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH-CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHHHHH
Q ss_conf             00986886608388888998376882889999974-890999809989999999985214--885277113278898765
Q gi|255764511|r   23 VLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM-GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQDYV   99 (341)
Q Consensus        23 Vll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~-~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~~~l   99 (341)
                      .|++.+++.....+...++|++-|.|-=+-++.+. ..+|+|+|..++|+..|+++.+.+  .+++.++++++.+.... 
T Consensus       110 ~Lve~~~~~~~~~~~~~vlDlgtGSG~I~isla~~p~~~V~avDiS~~Al~vA~~Na~~~~~~~~~~~~~~d~~~~~~~-  188 (284)
T 1nv8_A          110 ELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKE-  188 (284)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGG-
T ss_pred             HHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC-
T ss_conf             9999888765037886799860460598876765201451676397999999999998448986299996321001411-


Q ss_pred             HHCCCCEEEEECCCHH
Q ss_conf             3123324786225207
Q gi|255764511|r  100 PDKGVDGVVFDLGVSS  115 (341)
Q Consensus       100 ~~~~vdgIl~DLGvSS  115 (341)
                      ....||.|+.+-=|=+
T Consensus       189 ~~~~fDlIVSNPPYI~  204 (284)
T 1nv8_A          189 KFASIEMILSNPPYVK  204 (284)
T ss_dssp             GTTTCCEEEECCCCBC
T ss_pred             CCCCEEEEEECCCCCC
T ss_conf             2675308996788888


No 64 
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.50A {Clostridium acetobutylicum atcc 824} SCOP: c.66.1.43
Probab=97.30  E-value=0.00054  Score=45.04  Aligned_cols=72  Identities=19%  Similarity=0.179  Sum_probs=60.8

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEE
Q ss_conf             888889983768828899999748909998099899999999852148852771132788987653123324786
Q gi|255764511|r   35 APGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVF  109 (341)
Q Consensus        35 ~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~  109 (341)
                      .++..++|.=.|.|.++..+.+.+.+++|+|..+.++..|+++....+.++.+++++..++.   ....+|.|+.
T Consensus        36 ~~~~~iLDlGCGtG~~~~~l~~~g~~v~gvD~S~~ml~~a~~~~~~~~~~~~~~~~d~~~~~---~~~~fD~V~~  107 (246)
T 1y8c_A           36 LVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN---INRKFDLITC  107 (246)
T ss_dssp             CCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC---CSCCEEEEEE
T ss_pred             CCCCEEEEEECCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCHHHHH---CCCCCCCCCE
T ss_conf             99892999807462999999974995999967499999876311223443222346677751---0334122412


No 65 
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta- aspartate methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum 3D7}
Probab=97.30  E-value=0.003  Score=40.21  Aligned_cols=94  Identities=21%  Similarity=0.276  Sum_probs=71.1

Q ss_pred             CCCHHHHHHHHH--CCCCCCEEEECCCCCCHHHHHHHHH--------CCEEEEECCCHHHHHHHHHHHHHCC------CC
Q ss_conf             340098688660--8388888998376882889999974--------8909998099899999999852148------85
Q gi|255764511|r   21 VPVLLEKVIALL--NPAPGKVILDATFGAGGYSRSFCKM--------GSNVIALDRDPFAVSCGQETMRDYK------EQ   84 (341)
Q Consensus        21 ~PVll~Evl~~l--~~~~~g~~iD~TlG~GGHS~~iL~~--------~~~liaiDrD~~ai~~a~~~l~~~~------~r   84 (341)
                      .|-|.--+++.|  ..+|+..++|-=-|. |+..++|..        .++|+++|+|++....|+++++.+.      ++
T Consensus        63 ~P~~~A~~l~~L~~~l~~g~~VLeIGtGs-GY~ta~la~~~~~l~~~~g~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~n  141 (227)
T 2pbf_A           63 APHMHALSLKRLINVLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDN  141 (227)
T ss_dssp             CHHHHHHHHHHHTTTSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTT
T ss_pred             HHHHHHHHHHHHHHHCCCCCEEEEECCCC-CHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCHHHHCCCC
T ss_conf             78999999998786479988699837997-39999999997652245653899970599999999999851044415575


Q ss_pred             EEEECCCHHHHH--HHHHHCCCCEEEEECCCHH
Q ss_conf             277113278898--7653123324786225207
Q gi|255764511|r   85 FSLFQATFSQLQ--DYVPDKGVDGVVFDLGVSS  115 (341)
Q Consensus        85 ~~~~~~~F~~i~--~~l~~~~vdgIl~DLGvSS  115 (341)
                      +.+++++.....  .......+|.|+.+-++..
T Consensus       142 v~~~~gd~~~~~~~g~~~~~pfD~I~v~~a~~~  174 (227)
T 2pbf_A          142 FKIIHKNIYQVNEEEKKELGLFDAIHVGASASE  174 (227)
T ss_dssp             EEEEECCGGGCCHHHHHHHCCEEEEEECSBBSS
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCEEEEEECHHH
T ss_conf             899977732012557876788247999404356


No 66 
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative, SAM-dependent methyltransferase; HET: SAI; 1.94A {Leishmania major strain friedlin} SCOP: c.66.1.42
Probab=97.29  E-value=0.00097  Score=43.42  Aligned_cols=93  Identities=14%  Similarity=0.143  Sum_probs=68.8

Q ss_pred             HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH-CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCC
Q ss_conf             986886608388888998376882889999974-8909998099899999999852148852771132788987653123
Q gi|255764511|r   25 LEKVIALLNPAPGKVILDATFGAGGYSRSFCKM-GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKG  103 (341)
Q Consensus        25 l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~-~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~  103 (341)
                      ..+.|..+.+.+.+.++|+=.|.|..|..+|.. ..+|.|+|..+.++..|++.+... .++.+++.+..++.  .....
T Consensus        82 s~~fl~~~~~~~~~~vLDiGcG~G~~t~~ll~~~~~~V~~vD~s~~~l~~a~~~~~~~-~~~~~~~~d~~~~~--~~~~~  158 (254)
T 1xtp_A           82 SRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETAT--LPPNT  158 (254)
T ss_dssp             HHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGCC--CCSSC
T ss_pred             HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCC-CEEEEEECCHHHCC--CCCCC
T ss_conf             9999985733589738996678859999999863985899919889999986401577-42799977875688--87776


Q ss_pred             CCEEEEECCCHHHHHHHHH
Q ss_conf             3247862252078887654
Q gi|255764511|r  104 VDGVVFDLGVSSMQIDCGD  122 (341)
Q Consensus       104 vdgIl~DLGvSS~Qld~~~  122 (341)
                      +|.|+.-.  +.+++.+++
T Consensus       159 fD~I~~~~--~l~hl~d~~  175 (254)
T 1xtp_A          159 YDLIVIQW--TAIYLTDAD  175 (254)
T ss_dssp             EEEEEEES--CGGGSCHHH
T ss_pred             CCEEEEEE--EHHCCCHHH
T ss_conf             34676421--100476145


No 67 
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.28  E-value=0.0017  Score=41.83  Aligned_cols=111  Identities=13%  Similarity=0.102  Sum_probs=81.7

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC---CEEEEECCCHHHHHHHHHHHHHCC---CCEEEECCCHH
Q ss_conf             334009868866083888889983768828899999748---909998099899999999852148---85277113278
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMG---SNVIALDRDPFAVSCGQETMRDYK---EQFSLFQATFS   93 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~---~~liaiDrD~~ai~~a~~~l~~~~---~r~~~~~~~F~   93 (341)
                      |+|--+-+.|..+.+.++..++|.=.|.|..|..+.+.+   .+|+|+|..+.++..+.++.+..+   .++.+..++..
T Consensus        20 ~y~~~~~~~l~~~~~~~~~~VLDiGCGtG~~t~~la~~~~~~~~V~gvD~S~~mi~~a~~~~~~~~~~~~~v~~~~~dae   99 (299)
T 3g5t_A           20 SYPSDFYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSD   99 (299)
T ss_dssp             CCCHHHHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT
T ss_pred             CCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEECHH
T ss_conf             84199999999517789996999826088999999996499987999859889999999999863667532468983377


Q ss_pred             HHHHH----HHHCCCCEEEEECCCHHHHHHHHHHCCC-----CCCCCCE
Q ss_conf             89876----5312332478622520788876540734-----4566410
Q gi|255764511|r   94 QLQDY----VPDKGVDGVVFDLGVSSMQIDCGDRGFS-----FQKSGPL  133 (341)
Q Consensus        94 ~i~~~----l~~~~vdgIl~DLGvSS~Qld~~~RGFS-----f~~dgpL  133 (341)
                      ++.-.    .....+|.|+.-..   .|+-|+.+.|.     .+.+|.|
T Consensus       100 ~~~~~~~~~~~~~~fD~V~~~~~---~h~~d~~~~l~e~~r~LkpgG~l  145 (299)
T 3g5t_A          100 DFKFLGADSVDKQKIDMITAVEC---AHWFDFEKFQRSAYANLRKDGTI  145 (299)
T ss_dssp             CCGGGCTTTTTSSCEEEEEEESC---GGGSCHHHHHHHHHHHEEEEEEE
T ss_pred             HCCCCCCCCCCCCCCCEEEEECC---EECCCHHHHHHHHHHHHHCCCEE
T ss_conf             65442123466556547887003---63156178999999995239989


No 68 
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=97.28  E-value=0.00057  Score=44.92  Aligned_cols=80  Identities=20%  Similarity=0.306  Sum_probs=63.4

Q ss_pred             HHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCC----CCEEEECCCHHHHHHHHHH
Q ss_conf             868866083888889983768828899999748909998099899999999852148----8527711327889876531
Q gi|255764511|r   26 EKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYK----EQFSLFQATFSQLQDYVPD  101 (341)
Q Consensus        26 ~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~----~r~~~~~~~F~~i~~~l~~  101 (341)
                      .+.+..+.|.+ |.++|.-.|.|.++..+.+.+.+|+|+|..++++..|++++...+    .++.++++++.++.   ..
T Consensus        73 ~~~~~~~~p~~-g~vLDlGcG~G~~~~~la~~g~~v~gvD~s~~ml~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---~~  148 (299)
T 3g2m_A           73 REFATRTGPVS-GPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA---LD  148 (299)
T ss_dssp             HHHHHHHCCCC-SCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC---CS
T ss_pred             HHHHHHCCCCC-CCEEEEECCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHCC---CC
T ss_conf             99998349999-979999166778999999779979999699999999999998647663220447860321067---45


Q ss_pred             CCCCEEEE
Q ss_conf             23324786
Q gi|255764511|r  102 KGVDGVVF  109 (341)
Q Consensus       102 ~~vdgIl~  109 (341)
                      ..+|.|+.
T Consensus       149 ~~fD~v~~  156 (299)
T 3g2m_A          149 KRFGTVVI  156 (299)
T ss_dssp             CCEEEEEE
T ss_pred             CCCCEEEE
T ss_conf             55312489


No 69 
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.28  E-value=0.00092  Score=43.56  Aligned_cols=88  Identities=18%  Similarity=0.238  Sum_probs=67.7

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCC
Q ss_conf             09868866083888889983768828899999748909998099899999999852148852771132788987653123
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKG  103 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~  103 (341)
                      +-.+++..+.+..+|.++|.-.|.|.++..+.+.+-+|+|+|..+.++..++++..    .+.|.++++.++.  .....
T Consensus        29 ~~r~~i~~~~~~~~grVLDiGcG~G~~~~~la~~g~~v~gvD~S~~~l~~ar~~~~----~~~~~~~d~~~l~--~~~~~  102 (203)
T 3h2b_A           29 PDRVLIEPWATGVDGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTHP----SVTFHHGTITDLS--DSPKR  102 (203)
T ss_dssp             TTHHHHHHHHHHCCSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHCT----TSEEECCCGGGGG--GSCCC
T ss_pred             CCHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC----CCEEEECCCCCCC--CCCCC
T ss_conf             43999998515899849997378879999999779969999697889999974488----7349986210122--34566


Q ss_pred             CCEEEEECCCHHHHHH
Q ss_conf             3247862252078887
Q gi|255764511|r  104 VDGVVFDLGVSSMQID  119 (341)
Q Consensus       104 vdgIl~DLGvSS~Qld  119 (341)
                      +|.|+.-  .+.+++.
T Consensus       103 fD~I~~~--~vl~h~~  116 (203)
T 3h2b_A          103 WAGLLAW--YSLIHMG  116 (203)
T ss_dssp             EEEEEEE--SSSTTCC
T ss_pred             CCEEEEE--CCCCCCC
T ss_conf             6689994--6511499


No 70 
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis V583} SCOP: c.66.1.46
Probab=97.28  E-value=0.0041  Score=39.36  Aligned_cols=90  Identities=19%  Similarity=0.255  Sum_probs=68.6

Q ss_pred             HHHHHH-HHHCC-CCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHHHH
Q ss_conf             098688-66083-8888899837688288999997489-0999809989999999985214--88527711327889876
Q gi|255764511|r   24 LLEKVI-ALLNP-APGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQDY   98 (341)
Q Consensus        24 ll~Evl-~~l~~-~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~~~   98 (341)
                      .+.|.+ +.|.. .+|..++|+--|.|+-+...+.++. +|+++|.|++++..+++.++..  .+++.+++.+....-+.
T Consensus        30 ~vrealfn~l~~~~~~~~vLDlf~GsG~~~~ea~srGa~~v~~Ve~~~~~~~~~~~N~~~~~~~~~~~i~~~d~~~~l~~  109 (187)
T 2fhp_A           30 KVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQ  109 (187)
T ss_dssp             HHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHH
T ss_conf             99999999865115999899988873789999997588835899942467767665554202456417886107888776


Q ss_pred             -HH-HCCCCEEEEECCC
Q ss_conf             -53-1233247862252
Q gi|255764511|r   99 -VP-DKGVDGVVFDLGV  113 (341)
Q Consensus        99 -l~-~~~vdgIl~DLGv  113 (341)
                       .. ...+|.|++|==|
T Consensus       110 ~~~~~~~fDlIflDPPY  126 (187)
T 2fhp_A          110 FYEEKLQFDLVLLDPPY  126 (187)
T ss_dssp             HHHTTCCEEEEEECCCG
T ss_pred             HHHCCCCCCEEEECCCC
T ss_conf             43026765359978987


No 71 
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.25  E-value=0.001  Score=43.25  Aligned_cols=75  Identities=20%  Similarity=0.212  Sum_probs=54.2

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHC----------CCCEEEECCCHHHHHHHHHHCCCC
Q ss_conf             8888998376882889999974890999809989999999985214----------885277113278898765312332
Q gi|255764511|r   36 PGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDY----------KEQFSLFQATFSQLQDYVPDKGVD  105 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~----------~~r~~~~~~~F~~i~~~l~~~~vd  105 (341)
                      ....++|||.|.|..+..+-..+++|++++++|..-...+.-++.+          ..|+.+++++.-+...-+. ..+|
T Consensus        88 ~~~~VlDaTaGlG~Da~vlA~~G~~V~~iEr~p~l~~ll~d~l~ra~~~~~~~~~~~~ri~l~~~Ds~~~L~~~~-~~~D  166 (258)
T 2oyr_A           88 YLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDIT-PRPQ  166 (258)
T ss_dssp             BCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCS-SCCS
T ss_pred             CCCEEEECCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEECCCHHHHHHHCC-CCCC
T ss_conf             998489878774299999997799689984799999999999999872737789986323787387999986267-6688


Q ss_pred             EEEEEC
Q ss_conf             478622
Q gi|255764511|r  106 GVVFDL  111 (341)
Q Consensus       106 gIl~DL  111 (341)
                      -|++|=
T Consensus       167 vIYlDP  172 (258)
T 2oyr_A          167 VVYLDP  172 (258)
T ss_dssp             EEEECC
T ss_pred             EEEECC
T ss_conf             799899


No 72 
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.25  E-value=0.00059  Score=44.83  Aligned_cols=86  Identities=10%  Similarity=0.031  Sum_probs=65.5

Q ss_pred             CCCCCCEEEECCCCCCHHHHHHHHHC-CEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHHHCCCCEEEEE
Q ss_conf             83888889983768828899999748-909998099899999999852148-8527711327889876531233247862
Q gi|255764511|r   33 NPAPGKVILDATFGAGGYSRSFCKMG-SNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVPDKGVDGVVFD  110 (341)
Q Consensus        33 ~~~~~g~~iD~TlG~GGHS~~iL~~~-~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~~~~vdgIl~D  110 (341)
                      .+.++..++|+=.|.|..+..+|... .+|+|+|..+.++..|++++...+ .++.+++++..++.  .....+|.|+.-
T Consensus        76 ~~~~~~~vLDiGcG~G~~~~~ll~~~~~~v~~vD~s~~~l~~ar~~~~~~~~~~v~~~~~d~~~l~--~~~~~fD~I~~~  153 (241)
T 2ex4_A           76 NKTGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT--PEPDSYDVIWIQ  153 (241)
T ss_dssp             -CCCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC--CCSSCEEEEEEE
T ss_pred             CCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHCC--CCCCCCCEEEEC
T ss_conf             777887699901570786999997059989999999999999998776504663489957888715--775783189964


Q ss_pred             CCCHHHHHHHHH
Q ss_conf             252078887654
Q gi|255764511|r  111 LGVSSMQIDCGD  122 (341)
Q Consensus       111 LGvSS~Qld~~~  122 (341)
                      .  +-+++.+++
T Consensus       154 ~--vl~hl~d~~  163 (241)
T 2ex4_A          154 W--VIGHLTDQH  163 (241)
T ss_dssp             S--CGGGSCHHH
T ss_pred             C--CHHCCCCHH
T ss_conf             6--510475678


No 73 
>2i6g_A Putative methyltransferase; 16420133, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MLY; 1.90A {Salmonella typhimurium LT2} SCOP: c.66.1.44
Probab=97.24  E-value=0.00052  Score=45.18  Aligned_cols=80  Identities=18%  Similarity=0.139  Sum_probs=56.9

Q ss_pred             HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHHHCCCC
Q ss_conf             68866083888889983768828899999748909998099899999999852148-85277113278898765312332
Q gi|255764511|r   27 KVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVPDKGVD  105 (341)
Q Consensus        27 Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~~~~vd  105 (341)
                      ++++.+...+.|.++|.=.|.|.++..+.+++.+|+|+|.++.++..++++....+ +.+.+....+..   ...+..+|
T Consensus        22 ~~~~~~~~l~pgrVLDiGcG~G~~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~---~~~~~~fD   98 (199)
T 2i6g_A           22 DVLAAAXVVAPGRTLDLGCGNGRNSLYLAANGYDVTAWDXNPASMANLERIXAAEGLDNLQTDLVDLNT---LTFDGEYD   98 (199)
T ss_dssp             HHHHHHTTSCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTT---CCCCCCEE
T ss_pred             HHHHHHCCCCCCCEEEECCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHEECCC---CCCCCCEE
T ss_conf             999984378989689985889789999985499899995871899999986421376410010000002---46687531


Q ss_pred             EEEE
Q ss_conf             4786
Q gi|255764511|r  106 GVVF  109 (341)
Q Consensus       106 gIl~  109 (341)
                      .|+.
T Consensus        99 ~V~~  102 (199)
T 2i6g_A           99 FILS  102 (199)
T ss_dssp             EEEE
T ss_pred             EEEE
T ss_conf             9998


No 74 
>1nw3_A Histone methyltransferase DOT1L; HDOT1, histone lysine methyltransferase,; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.31
Probab=97.24  E-value=0.0031  Score=40.13  Aligned_cols=77  Identities=10%  Similarity=0.210  Sum_probs=63.2

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH-CC-EEEEECCCHHHHHHHHHHHHHC----------CCCEEE
Q ss_conf             33400986886608388888998376882889999974-89-0999809989999999985214----------885277
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM-GS-NVIALDRDPFAVSCGQETMRDY----------KEQFSL   87 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~-~~-~liaiDrD~~ai~~a~~~l~~~----------~~r~~~   87 (341)
                      =.+-++.++++.+.+.++.+|+|.-.|.|+-...+... +. +++|+|..++++..|++..+.+          ..++.|
T Consensus       139 ~~~~~~~~i~~~~~l~~~~~~~DiG~G~G~~~~~~a~~~~~~~~~Giei~~~~~~~A~~~~~~~~~~~~~~g~~~~~v~~  218 (416)
T 1nw3_A          139 TSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTL  218 (416)
T ss_dssp             CCHHHHHHHHHHSCCCTTCEEEEETCTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEE
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf             40999999999708999988996688888899999997699889999799999999999999998877762677774599


Q ss_pred             ECCCHHHHH
Q ss_conf             113278898
Q gi|255764511|r   88 FQATFSQLQ   96 (341)
Q Consensus        88 ~~~~F~~i~   96 (341)
                      ++++|.+..
T Consensus       219 ~~gD~~~~~  227 (416)
T 1nw3_A          219 ERGDFLSEE  227 (416)
T ss_dssp             EECCTTSHH
T ss_pred             EECCCCCCC
T ss_conf             976656774


No 75 
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.20  E-value=0.0045  Score=39.14  Aligned_cols=80  Identities=21%  Similarity=0.377  Sum_probs=62.6

Q ss_pred             CCCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCH-HHHHHHHHH-CCCCEEE
Q ss_conf             38888899837688288999997489-0999809989999999985214--88527711327-889876531-2332478
Q gi|255764511|r   34 PAPGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDY--KEQFSLFQATF-SQLQDYVPD-KGVDGVV  108 (341)
Q Consensus        34 ~~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F-~~i~~~l~~-~~vdgIl  108 (341)
                      .++|..++|+--|.||-|.+.+..+. +|+++|.++.|+..++++.+..  ..+..++.++- ..+...... ..+|.|+
T Consensus       215 ~~~g~~VLDl~~g~G~~si~aa~~ga~~V~~vD~s~~al~~a~~N~~~Ngl~~~~~~~~~D~~~~l~~~~~~~~~FD~Ii  294 (396)
T 2as0_A          215 VQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV  294 (396)
T ss_dssp             CCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCCEEE
T ss_conf             15897698817877888999997799746887188889999999999839974556996629888788886078998799


Q ss_pred             EECCC
Q ss_conf             62252
Q gi|255764511|r  109 FDLGV  113 (341)
Q Consensus       109 ~DLGv  113 (341)
                      +|.-.
T Consensus       295 ~DpP~  299 (396)
T 2as0_A          295 LDPPA  299 (396)
T ss_dssp             ECCCC
T ss_pred             ECCHH
T ss_conf             76512


No 76 
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransferase domain; 2.90A {Escherichia coli}
Probab=97.19  E-value=0.0037  Score=39.67  Aligned_cols=86  Identities=12%  Similarity=0.138  Sum_probs=70.2

Q ss_pred             HCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHHHCCCCEE
Q ss_conf             08388888998376882889999974---8909998099899999999852148-8527711327889876531233247
Q gi|255764511|r   32 LNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVPDKGVDGV  107 (341)
Q Consensus        32 l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~~~~vdgI  107 (341)
                      +.+.+|..++|+.-|-||.|..|...   .+.|+|.|.++.-+....++++.++ .++.+.+.....+....+ ..+|.|
T Consensus       113 ~~~~~g~~VLDlCAAPGgKT~~la~~~~~~g~lvAnD~~~~R~~~L~~nl~r~g~~nv~~~~~d~~~~~~~~~-~~fD~I  191 (479)
T 2frx_A          113 ADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVP-EMFDAI  191 (479)
T ss_dssp             TTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHST-TCEEEE
T ss_pred             HCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCCC-CCCCEE
T ss_conf             2789998699947886589999998624682599653657778899998986389718999354001140131-016789


Q ss_pred             EEECCCHHHHH
Q ss_conf             86225207888
Q gi|255764511|r  108 VFDLGVSSMQI  118 (341)
Q Consensus       108 l~DLGvSS~Ql  118 (341)
                      |.|-=.|..=.
T Consensus       192 LvDaPCSG~G~  202 (479)
T 2frx_A          192 LLDAPCSGEGV  202 (479)
T ss_dssp             EEECCCCCGGG
T ss_pred             EECCCCCCCCC
T ss_conf             96598567864


No 77 
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.19  E-value=0.0047  Score=39.02  Aligned_cols=82  Identities=9%  Similarity=0.018  Sum_probs=65.2

Q ss_pred             CCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCC---CCEEEECCCHHHHHHHHHHCCCCE
Q ss_conf             8388888998376882889999974---8909998099899999999852148---852771132788987653123324
Q gi|255764511|r   33 NPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYK---EQFSLFQATFSQLQDYVPDKGVDG  106 (341)
Q Consensus        33 ~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~---~r~~~~~~~F~~i~~~l~~~~vdg  106 (341)
                      .......+++..-|.|.=|..+++.   .++|+++|.|++....|++.+...+   .++.++.++..++-.-+....+|.
T Consensus        53 ~~~~~~~vlEiGt~~G~stl~la~al~~~g~l~tIE~~~e~~~~Ar~~~~~ag~~~~rv~~i~gda~e~L~~l~~~~fDl  132 (221)
T 3dr5_A           53 NGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQL  132 (221)
T ss_dssp             CCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEE
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCCE
T ss_conf             12389989997280579999999847999789999899999999999999668876246773277899878743478777


Q ss_pred             EEEECCCH
Q ss_conf             78622520
Q gi|255764511|r  107 VVFDLGVS  114 (341)
Q Consensus       107 Il~DLGvS  114 (341)
                      |+.|.--.
T Consensus       133 VfiD~~k~  140 (221)
T 3dr5_A          133 VFGQVSPM  140 (221)
T ss_dssp             EEECCCTT
T ss_pred             EEECCCHH
T ss_conf             99758867


No 78 
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus HB8} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.18  E-value=0.0034  Score=39.91  Aligned_cols=84  Identities=21%  Similarity=0.203  Sum_probs=63.5

Q ss_pred             HHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHH-HHHHHHH-CCCCEE
Q ss_conf             6083888889983768828899999748909998099899999999852148-852771132788-9876531-233247
Q gi|255764511|r   31 LLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQ-LQDYVPD-KGVDGV  107 (341)
Q Consensus        31 ~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~-i~~~l~~-~~vdgI  107 (341)
                      .+....|..++|+--|.||-|.++...+.+|+++|.++.|+..++++.+..+ +++.++.++-.+ +...... ..+|.|
T Consensus       204 ~~~~~~g~~VLDl~~g~G~~s~~~a~~~~~V~~vD~s~~al~~a~~n~~~ng~~~~~~~~~D~~~~l~~~~~~~~~fD~V  283 (382)
T 1wxx_A          204 YMERFRGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLV  283 (382)
T ss_dssp             HGGGCCEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred             HHHHHCCCEEEECCCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCEE
T ss_conf             98762698041046778779999984677267204639999999999997286886678601777777778626799869


Q ss_pred             EEECCCH
Q ss_conf             8622520
Q gi|255764511|r  108 VFDLGVS  114 (341)
Q Consensus       108 l~DLGvS  114 (341)
                      ++|--.+
T Consensus       284 ilDpP~~  290 (382)
T 1wxx_A          284 VLDPPAF  290 (382)
T ss_dssp             EECCCCS
T ss_pred             EECCCCC
T ss_conf             9827211


No 79 
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=97.16  E-value=0.0018  Score=41.71  Aligned_cols=61  Identities=20%  Similarity=0.130  Sum_probs=54.5

Q ss_pred             CCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHC
Q ss_conf             3400986886608388888998376882889999974890999809989999999985214
Q gi|255764511|r   21 VPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDY   81 (341)
Q Consensus        21 ~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~   81 (341)
                      ++--+.+.++.|.+.+|+.++|-=.|.|.++..+.+.+.+|+|+|..+.+|..|+++....
T Consensus         7 ~~~~~~~~~~~l~~~~g~rVLD~GCG~G~~~~~La~~g~~v~gvD~S~~~i~~a~~~~~~~   67 (203)
T 1pjz_A            7 VNKDLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQ   67 (203)
T ss_dssp             STHHHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSC
T ss_pred             HCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCC
T ss_conf             4889999999649999997999737898889999967987788526599999999972345


No 80 
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1, methyltransferase domain, structural genomics; HET: MSE; 1.60A {Mesorhizobium loti MAFF303099}
Probab=97.14  E-value=0.00093  Score=43.55  Aligned_cols=91  Identities=20%  Similarity=0.223  Sum_probs=66.1

Q ss_pred             HHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCE
Q ss_conf             88660838888899837688288999997489-09998099899999999852148852771132788987653123324
Q gi|255764511|r   28 VIALLNPAPGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDG  106 (341)
Q Consensus        28 vl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdg  106 (341)
                      +++.+-...|..++|.=.|.|.+|..+.+.+. +|+|+|..+.++..|+++...  .++.+.++++.++.  .....+|.
T Consensus        35 ~~~~~p~~~g~rVLDiGCG~G~~~~~l~~~~~~~V~gvD~S~~~l~~a~~~~~~--~~v~~~~~d~~~~~--~~~~~fD~  110 (243)
T 3bkw_A           35 LRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD--TGITYERADLDKLH--LPQDSFDL  110 (243)
T ss_dssp             HHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS--SSEEEEECCGGGCC--CCTTCEEE
T ss_pred             HHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCC--CCCCCCCCCCCCCC--CCCCCCCC
T ss_conf             998579778899999788898999999975987899987579899999861344--43331002334466--55434545


Q ss_pred             EEEECCCHHHHHHHHHHC
Q ss_conf             786225207888765407
Q gi|255764511|r  107 VVFDLGVSSMQIDCGDRG  124 (341)
Q Consensus       107 Il~DLGvSS~Qld~~~RG  124 (341)
                      |+.-  .+.+++.++.+.
T Consensus       111 V~~~--~~l~~~~d~~~~  126 (243)
T 3bkw_A          111 AYSS--LALHYVEDVARL  126 (243)
T ss_dssp             EEEE--SCGGGCSCHHHH
T ss_pred             CCCE--EEEEECCCHHHH
T ss_conf             6551--367616899999


No 81 
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.14  E-value=0.0016  Score=42.08  Aligned_cols=68  Identities=18%  Similarity=0.278  Sum_probs=53.9

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH
Q ss_conf             09868866083888889983768828899999748909998099899999999852148852771132788
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ   94 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~   94 (341)
                      .+.+.+..+   +++.++|.-.|.|.++..+.+.+.+|+|+|..+.++..++++.+..+-++.+++.++.+
T Consensus        20 ~l~~~~~~~---~~~~vLDlGcG~G~~~~~la~~G~~V~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~   87 (202)
T 2kw5_A           20 FLVSVANQI---PQGKILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLAD   87 (202)
T ss_dssp             SHHHHHHHS---CSSEEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTT
T ss_pred             HHHHHHHCC---CCCCEEEECCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEECCHHH
T ss_conf             999974138---98939998377899999999869914677778999999999888719955899822633


No 82 
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175, PSI-2; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.14  E-value=0.0021  Score=41.21  Aligned_cols=89  Identities=15%  Similarity=0.248  Sum_probs=67.4

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHH-----HCCCCEEEECCCH
Q ss_conf             334009868866083888889983768828899999748--909998099899999999852-----1488527711327
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMR-----DYKEQFSLFQATF   92 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~-----~~~~r~~~~~~~F   92 (341)
                      +.+|||-..   +.+..++.++|.--|.|.-+..+....  .+|+|+|.|++++..|++.++     .+.+|++++++..
T Consensus        23 ~DavLLAa~---~~~~~~~rVLDlG~G~G~i~l~La~r~~~~~v~gvEi~~~~~~lAr~N~~ln~~~~~~~ri~~~~~Di   99 (260)
T 2ozv_A           23 MDAMLLASL---VADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADV   99 (260)
T ss_dssp             CHHHHHHHT---CCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCT
T ss_pred             HHHHHHHHH---CCCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECHH
T ss_conf             279999723---68889899999543676999999985899889999899999999999999865443323535896332


Q ss_pred             H-----HHHHHHHHCCCCEEEEEC
Q ss_conf             8-----898765312332478622
Q gi|255764511|r   93 S-----QLQDYVPDKGVDGVVFDL  111 (341)
Q Consensus        93 ~-----~i~~~l~~~~vdgIl~DL  111 (341)
                      .     .+...++...||-|+.+-
T Consensus       100 ~~~~~~~~~~~~~~~~fD~VvsNP  123 (260)
T 2ozv_A          100 TLRAKARVEAGLPDEHFHHVIMNP  123 (260)
T ss_dssp             TCCHHHHHHTTCCTTCEEEEEECC
T ss_pred             HCCCHHHHHHHHCCCCCCEEEECC
T ss_conf             132212344331367626798669


No 83 
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.11  E-value=0.0044  Score=39.18  Aligned_cols=88  Identities=17%  Similarity=0.156  Sum_probs=60.1

Q ss_pred             CCHHHHHHHHHC-CCCCCEEEECCCCCCHHHHHHHHH--CCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHH
Q ss_conf             400986886608-388888998376882889999974--8909998099899999999852148-852771132788987
Q gi|255764511|r   22 PVLLEKVIALLN-PAPGKVILDATFGAGGYSRSFCKM--GSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQD   97 (341)
Q Consensus        22 PVll~Evl~~l~-~~~~g~~iD~TlG~GGHS~~iL~~--~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~   97 (341)
                      |=+..|-..... ..+|.+++|+--|-|+.+..+++.  ..+|+|+|.+|+|+..++++++..+ .+...+++...++  
T Consensus       104 ~r~~~Er~ri~~~v~~ge~VlDl~aG~G~~~i~~ak~~~~~~V~aiDinp~av~~l~~N~~~N~v~n~~~i~~D~r~~--  181 (272)
T 3a27_A          104 QGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV--  181 (272)
T ss_dssp             GGGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC--
T ss_pred             CCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCC--
T ss_conf             987799999873458999999937865889999875069509999959999999999999984999759992776534--


Q ss_pred             HHHHCCCCEEEEECC
Q ss_conf             653123324786225
Q gi|255764511|r   98 YVPDKGVDGVVFDLG  112 (341)
Q Consensus        98 ~l~~~~vdgIl~DLG  112 (341)
                       .....+|-|++++-
T Consensus       182 -~~~~~fD~Vimn~p  195 (272)
T 3a27_A          182 -ELKDVADRVIMGYV  195 (272)
T ss_dssp             -CCTTCEEEEEECCC
T ss_pred             -CCCCCCCEEEECCC
T ss_conf             -55788889997895


No 84 
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=97.10  E-value=0.0014  Score=42.30  Aligned_cols=76  Identities=16%  Similarity=0.248  Sum_probs=54.4

Q ss_pred             HHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCC
Q ss_conf             86886608388888998376882889999974890999809989999999985214885277113278898765312332
Q gi|255764511|r   26 EKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVD  105 (341)
Q Consensus        26 ~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vd  105 (341)
                      .+.+....| +++.++|.=.|.|.++..+.+.+.+|+|+|..|+++..|+++..    ++.++++++.++.   .+..+|
T Consensus        31 ~~~~~~~~~-~~~~VLDiGcG~G~~~~~la~~g~~v~giD~S~~~l~~a~~~~~----~~~~~~~d~~~~~---~~~~fD  102 (239)
T 3bxo_A           31 ADLVRSRTP-EASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRLP----DATLHQGDMRDFR---LGRKFS  102 (239)
T ss_dssp             HHHHHHHCT-TCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHCT----TCEEEECCTTTCC---CSSCEE
T ss_pred             HHHHHHHCC-CCCEEEEEECCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC----CCCCCCCCCCCCC---CCCCCC
T ss_conf             999997489-94989998175849999999739969999696788788863365----4422322112677---331432


Q ss_pred             EEEE
Q ss_conf             4786
Q gi|255764511|r  106 GVVF  109 (341)
Q Consensus       106 gIl~  109 (341)
                      .|+.
T Consensus       103 ~v~~  106 (239)
T 3bxo_A          103 AVVS  106 (239)
T ss_dssp             EEEE
T ss_pred             HHEE
T ss_conf             1001


No 85 
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.10  E-value=0.0016  Score=42.04  Aligned_cols=84  Identities=19%  Similarity=0.266  Sum_probs=63.5

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH
Q ss_conf             33400986886608388888998376882889999974890999809989999999985214885277113278898765
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYV   99 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l   99 (341)
                      .++.+++.+.+.+  .+++.++|.=.|.|.++..+. .+.+|+|+|.+++++..|+++....+.++.++++++.++.   
T Consensus        19 ~y~~~~~~i~~~~--~~~~~VLD~GCG~G~~~~~la-~~~~v~giD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~---   92 (243)
T 3d2l_A           19 PYPEWVAWVLEQV--EPGKRIADIGCGTGTATLLLA-DHYEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE---   92 (243)
T ss_dssp             CHHHHHHHHHHHS--CTTCEEEEESCTTCHHHHHHT-TTSEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC---
T ss_pred             CHHHHHHHHHHHC--CCCCEEEEECCCCCHHHHHHH-HCCEEEEEECCHHHHHHHHHHHHHCCCEEEECCCCHHCCC---
T ss_conf             7999999999868--999999996887879999986-1857999988518899988765301202331012000011---


Q ss_pred             HHCCCCEEEE
Q ss_conf             3123324786
Q gi|255764511|r  100 PDKGVDGVVF  109 (341)
Q Consensus       100 ~~~~vdgIl~  109 (341)
                      ....+|.++.
T Consensus        93 ~~~~~d~v~~  102 (243)
T 3d2l_A           93 LPEPVDAITI  102 (243)
T ss_dssp             CSSCEEEEEE
T ss_pred             CCCCCCCHHH
T ss_conf             2434343134


No 86 
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.02  E-value=0.0019  Score=41.58  Aligned_cols=59  Identities=17%  Similarity=0.256  Sum_probs=47.2

Q ss_pred             CCCCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHCCC--CEEEECCC
Q ss_conf             838888899837688288999997489-099980998999999998521488--52771132
Q gi|255764511|r   33 NPAPGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDYKE--QFSLFQAT   91 (341)
Q Consensus        33 ~~~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~~~--r~~~~~~~   91 (341)
                      ...++..++|.-.|.||++..+.+.+. +|+|+|..++++..|+++.+..+.  ++.+....
T Consensus        61 ~~~~~~~VLDlGCG~G~~~~~~~~~~~~~v~GiD~S~~~l~~a~~r~~~~~~~~~~~f~~~d  122 (298)
T 1ri5_A           61 YTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQD  122 (298)
T ss_dssp             HCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESC
T ss_pred             HCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECC
T ss_conf             48995989996370878999999669985887589999999999998752887523778645


No 87 
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 1pry_A
Probab=97.02  E-value=0.0022  Score=41.12  Aligned_cols=87  Identities=11%  Similarity=0.177  Sum_probs=64.0

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHH
Q ss_conf             0986886608388888998376882889999974---8909998099899999999852148852771132788987653
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVP  100 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~  100 (341)
                      ++.-.++.|.++||..++|.-.|.|+-+..+.+.   .|+|+|+|..|.++..+.++.+..+ ++..+...-.....+..
T Consensus        61 ~i~~~l~~l~i~pG~~VLDlG~G~G~~~~~la~~vg~~G~V~avD~s~~~l~~l~~~~~~~~-ni~~v~~da~~~~~~~~  139 (227)
T 1g8a_A           61 AIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERR-NIVPILGDATKPEEYRA  139 (227)
T ss_dssp             HHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCT-TEEEEECCTTCGGGGTT
T ss_pred             HHHCCHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCC-CCEEEEEECCCHHHCCC
T ss_conf             99703531698999999997178788999999984899669999899999999998787669-83499987679446544


Q ss_pred             -HCCCCEEEEEC
Q ss_conf             -12332478622
Q gi|255764511|r  101 -DKGVDGVVFDL  111 (341)
Q Consensus       101 -~~~vdgIl~DL  111 (341)
                       ...||.|+.|+
T Consensus       140 ~~~~vd~v~~~~  151 (227)
T 1g8a_A          140 LVPKVDVIFEDV  151 (227)
T ss_dssp             TCCCEEEEEECC
T ss_pred             CCCEEEEEEEEE
T ss_conf             567199999760


No 88 
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.02  E-value=0.0027  Score=40.58  Aligned_cols=79  Identities=14%  Similarity=0.154  Sum_probs=60.8

Q ss_pred             HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCC
Q ss_conf             688660838888899837688288999997489-0999809989999999985214885277113278898765312332
Q gi|255764511|r   27 KVIALLNPAPGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVD  105 (341)
Q Consensus        27 Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vd  105 (341)
                      .+...|.+.++..++|.=.|.|.+|..+.+.++ +|+|+|.-+.++..|+++...  .++.+.+.+..++.  +....+|
T Consensus        35 ~i~~~lp~~~g~~VLDiGcG~G~~~~~l~~~g~~~v~giD~S~~~i~~a~~~~~~--~~~~~~~~d~~~l~--~~~~~fD  110 (253)
T 3g5l_A           35 ELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTS--PVVCYEQKAIEDIA--IEPDAYN  110 (253)
T ss_dssp             HHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCC--TTEEEEECCGGGCC--CCTTCEE
T ss_pred             HHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCC--CCCCCCCCCCCCCC--CCCCCCC
T ss_conf             9998468789698999837784999999964999899994850656899874034--44322222224566--5675555


Q ss_pred             EEEE
Q ss_conf             4786
Q gi|255764511|r  106 GVVF  109 (341)
Q Consensus       106 gIl~  109 (341)
                      .|+.
T Consensus       111 ~V~~  114 (253)
T 3g5l_A          111 VVLS  114 (253)
T ss_dssp             EEEE
T ss_pred             CCCC
T ss_conf             3421


No 89 
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.70A {Bacillus thuringiensis}
Probab=97.02  E-value=0.00058  Score=44.84  Aligned_cols=85  Identities=15%  Similarity=0.203  Sum_probs=65.4

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCH
Q ss_conf             88888998376882889999974890999809989999999985214885277113278898765312332478622520
Q gi|255764511|r   35 APGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVS  114 (341)
Q Consensus        35 ~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvS  114 (341)
                      .++..++|.=.|.|..+..+.+.+.+++|+|..+.++..|+++...  .++.+.++...++.  .+...+|.|+.-.  +
T Consensus        52 ~~~~~VLDiGcG~G~~~~~l~~~~~~v~giD~s~~~l~~a~~~~~~--~~~~~~~~~~~~l~--~~~~~fD~i~~~~--~  125 (242)
T 3l8d_A           52 KKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEG--PDLSFIKGDLSSLP--FENEQFEAIMAIN--S  125 (242)
T ss_dssp             CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTCB--TTEEEEECBTTBCS--SCTTCEEEEEEES--C
T ss_pred             CCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCC--CCCCCCCCCCCCCC--CCCCCEEEEEEEC--H
T ss_conf             9969799965888599999996499899997974667998750344--42222234435678--8878568985500--2


Q ss_pred             HHHHHHHHHCC
Q ss_conf             78887654073
Q gi|255764511|r  115 SMQIDCGDRGF  125 (341)
Q Consensus       115 S~Qld~~~RGF  125 (341)
                      -++++++...|
T Consensus       126 l~hi~d~~~~l  136 (242)
T 3l8d_A          126 LEWTEEPLRAL  136 (242)
T ss_dssp             TTSSSCHHHHH
T ss_pred             HHHCCCHHHHH
T ss_conf             88447999999


No 90 
>1xva_A Glycine N-methyltransferase; HET: SAM; 2.20A {Escherichia coli} SCOP: c.66.1.5 PDB: 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.01  E-value=0.0059  Score=38.34  Aligned_cols=86  Identities=20%  Similarity=0.290  Sum_probs=60.3

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCC-----CEEEECCCHHHHHHH
Q ss_conf             098688660838888899837688288999997489099980998999999998521488-----527711327889876
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKE-----QFSLFQATFSQLQDY   98 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~-----r~~~~~~~F~~i~~~   98 (341)
                      ...-+++.|...++..++|.=.|.|.++..+.+.+.+|+|+|..++++..|+++......     ++.+...++-.++.-
T Consensus        44 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~g~~v~gvD~s~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (292)
T 1xva_A           44 YKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKD  123 (292)
T ss_dssp             HHHHHHHHHHHTTCCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHH
T ss_pred             HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCC
T ss_conf             99999996413184999990478849999999779969999899999999999998644465631356641110124434


Q ss_pred             HH-HCCCCEEEE
Q ss_conf             53-123324786
Q gi|255764511|r   99 VP-DKGVDGVVF  109 (341)
Q Consensus        99 l~-~~~vdgIl~  109 (341)
                      ++ ...+|.|+.
T Consensus       124 ~~~~~~fD~v~~  135 (292)
T 1xva_A          124 VPAGDGFDAVIC  135 (292)
T ss_dssp             SCCTTCEEEEEE
T ss_pred             CCCCCCEEEEEE
T ss_conf             566676139999


No 91 
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.00  E-value=0.011  Score=36.48  Aligned_cols=78  Identities=14%  Similarity=0.226  Sum_probs=62.8

Q ss_pred             CCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHH
Q ss_conf             34009868866083888889983768828899999748909998099899999999852148-85277113278898765
Q gi|255764511|r   21 VPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYV   99 (341)
Q Consensus        21 ~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l   99 (341)
                      ...|++.+++++.+.++ .++|.=-|.|..|..+-+...+|+|+|.+++|+..|++..+..+ ++..|+.++-.++.+.+
T Consensus       199 ~~~l~~~v~~~~~~~~~-~vlDLycG~Gt~sl~La~~~~~V~gvE~~~~av~~A~~Na~~n~i~N~~f~~~~a~~~~~~~  277 (369)
T 3bt7_A          199 NIQMLEWALDVTKGSKG-DLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAM  277 (369)
T ss_dssp             HHHHHHHHHHHTTTCCS-EEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCC-EEEECCCCCCHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHH
T ss_conf             99999999987156776-48873789658899987308578899970267899999999759887189972599999887


No 92 
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=97.00  E-value=0.0049  Score=38.85  Aligned_cols=96  Identities=17%  Similarity=0.245  Sum_probs=73.1

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHHC-CCCEEEECCCHHHHHHHHH
Q ss_conf             09868866083888889983768828899999748--90999809989999999985214-8852771132788987653
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRDY-KEQFSLFQATFSQLQDYVP  100 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~~-~~r~~~~~~~F~~i~~~l~  100 (341)
                      |-..+.+.+...||..++|.=.|.|..+..+.+.+  ++|+|+|.++.++..++...+.. ..++.+..+...++.  ..
T Consensus        25 ~~~~~~~~~~~~pg~rVLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~--~~  102 (276)
T 3mgg_A           25 LEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP--FE  102 (276)
T ss_dssp             HHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC--SC
T ss_pred             HHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCHHHCC--CC
T ss_conf             9999875569999998999558588999999987999789999795676322221122115566421533523204--77


Q ss_pred             HCCCCEEEEECCCHHHHHHHHHH
Q ss_conf             12332478622520788876540
Q gi|255764511|r  101 DKGVDGVVFDLGVSSMQIDCGDR  123 (341)
Q Consensus       101 ~~~vdgIl~DLGvSS~Qld~~~R  123 (341)
                      ...+|.|+.-..+..+  .++..
T Consensus       103 ~~sfD~V~~~~~l~~~--~d~~~  123 (276)
T 3mgg_A          103 DSSFDHIFVCFVLEHL--QSPEE  123 (276)
T ss_dssp             TTCEEEEEEESCGGGC--SCHHH
T ss_pred             CCCCCCHHHHHHHHHC--HHHHH
T ss_conf             7881211111246313--05999


No 93 
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research center for structural genomics, protein structure initiative, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=96.97  E-value=0.0033  Score=39.95  Aligned_cols=81  Identities=12%  Similarity=0.074  Sum_probs=56.7

Q ss_pred             HHHHCCCCCCEEEECCCCCCHHHHHHHHH--CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCE
Q ss_conf             86608388888998376882889999974--8909998099899999999852148852771132788987653123324
Q gi|255764511|r   29 IALLNPAPGKVILDATFGAGGYSRSFCKM--GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDG  106 (341)
Q Consensus        29 l~~l~~~~~g~~iD~TlG~GGHS~~iL~~--~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdg  106 (341)
                      +......++..++|.-.|.|+.+..+...  +.+++|+|.++.++..|+++++.++-...+...+-+.+ ....+..+|.
T Consensus        48 ~~~~~~~~~~~vLDig~G~G~~~~~~a~~~~~~~v~~vDi~~~~~~~a~~n~~~~~~~~~i~~~~~~~~-~~~~~~~fD~  126 (230)
T 3evz_A           48 FLKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGII-KGVVEGTFDV  126 (230)
T ss_dssp             HHHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSS-TTTCCSCEEE
T ss_pred             HHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCH-HHCCCCCCCE
T ss_conf             998457898989994074439999999977998799998863112467766886066517998521101-2135765248


Q ss_pred             EEEE
Q ss_conf             7862
Q gi|255764511|r  107 VVFD  110 (341)
Q Consensus       107 Il~D  110 (341)
                      |+.|
T Consensus       127 Iv~N  130 (230)
T 3evz_A          127 IFSA  130 (230)
T ss_dssp             EEEC
T ss_pred             EEEC
T ss_conf             9989


No 94 
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=96.96  E-value=0.0029  Score=40.35  Aligned_cols=80  Identities=11%  Similarity=-0.002  Sum_probs=56.6

Q ss_pred             CCCCCEEEECCCCCCHHHHHHHH-HCCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf             38888899837688288999997-48909998099899999999852148-85277113278898765312332478622
Q gi|255764511|r   34 PAPGKVILDATFGAGGYSRSFCK-MGSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVPDKGVDGVVFDL  111 (341)
Q Consensus        34 ~~~~g~~iD~TlG~GGHS~~iL~-~~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~~~~vdgIl~DL  111 (341)
                      ..+|..++|+=-|.|+.....|. ...+|+|+|.|+.|+..+++..+..+ +++.+++++..+.........+|.|+.|.
T Consensus       170 ~~~g~~vldlg~g~g~~l~~~l~~~~~~V~~vDi~~~~l~~a~~~a~~~g~~~i~~~~~d~~~~~~~~~~~~fD~v~~dp  249 (373)
T 2qm3_A          170 DLENKDIFVLGDDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP  249 (373)
T ss_dssp             CSTTCEEEEESCTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred             CCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCEEEECC
T ss_conf             77899799997992499999997699989999797999999999999819974399853086632454078889899899


Q ss_pred             CC
Q ss_conf             52
Q gi|255764511|r  112 GV  113 (341)
Q Consensus       112 Gv  113 (341)
                      =+
T Consensus       250 p~  251 (373)
T 2qm3_A          250 PE  251 (373)
T ss_dssp             CS
T ss_pred             CC
T ss_conf             98


No 95 
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genomics, JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=96.95  E-value=0.002  Score=41.41  Aligned_cols=61  Identities=16%  Similarity=0.207  Sum_probs=51.0

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             3340098688660838888899837688288999997489099980998999999998521
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRD   80 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~   80 (341)
                      +.......++..+.+..++.++|.=.|.|+++..+.+.+.+|+|+|.++.++..|+++...
T Consensus        36 ~~~~~~~~~l~~l~~~~~~~vLDiGcG~G~~~~~l~~~g~~v~gvD~S~~~i~~A~~~~~~   96 (227)
T 3e8s_A           36 RRQVTDQAILLAILGRQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAAGAG   96 (227)
T ss_dssp             HHHTHHHHHHHHHHHTCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHTCSS
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCC
T ss_conf             8877899999971558959899976898399999997699699986817889999986014


No 96 
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=96.93  E-value=0.002  Score=41.43  Aligned_cols=61  Identities=18%  Similarity=0.135  Sum_probs=49.8

Q ss_pred             CCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             8334009868866083888889983768828899999748909998099899999999852
Q gi|255764511|r   19 DHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMR   79 (341)
Q Consensus        19 ~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~   79 (341)
                      .+.|.++-|..-.-...||+.++|.-.|.|.++..+.+.+.+|+|+|.++.++..|+++..
T Consensus        31 ~~~~~~~~~~~l~~~l~pg~rVLDvGCGtG~~a~~La~~g~~V~giD~S~~mi~~Ar~~~~   91 (226)
T 3m33_A           31 GPDPELTFDLWLSRLLTPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANAP   91 (226)
T ss_dssp             SSCTTHHHHHHHHHHCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHCT
T ss_pred             CCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHCC
T ss_conf             9886799999999518999979998846586457775168689965799999999998589


No 97 
>3hvi_A Catechol O-methyltransferase; neurotransmitter degradation, alternative initiation, catecholamine metabolism, cell membrane, cytoplasm; HET: 619; 1.20A {Rattus norvegicus} PDB: 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 2zlb_A 2zth_A* 2zvj_A* 3a7d_A* 3bwm_A* 3bwy_A* 3a7e_A*
Probab=96.91  E-value=0.013  Score=36.23  Aligned_cols=80  Identities=11%  Similarity=0.210  Sum_probs=63.0

Q ss_pred             CCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHH--CCCCEEEECCCHHHHHHHHHH----CCCCE
Q ss_conf             8888998376882889999974---89099980998999999998521--488527711327889876531----23324
Q gi|255764511|r   36 PGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRD--YKEQFSLFQATFSQLQDYVPD----KGVDG  106 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~--~~~r~~~~~~~F~~i~~~l~~----~~vdg  106 (341)
                      +...+++--.|.|+=|..+.+.   .++|+++|.+++....|++.++.  +.+++.++.+++.++-.-+..    ..+|.
T Consensus        58 kpk~iLEiGt~~G~Stl~la~al~~~g~v~~id~~~~~~~~ar~~~~~agl~~~I~l~~gd~~e~l~~l~~~~~~~~fD~  137 (221)
T 3hvi_A           58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM  137 (221)
T ss_dssp             CCSEEEEECCTTSHHHHHHHTTCCTTCEEEEECCCHHHHHHHHHHHHHHTCTTTEEEECSCHHHHGGGHHHHHCCSCCSE
T ss_pred             CCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEE
T ss_conf             99999997147429999999857999789999888412589999999759977415883779999998775347653258


Q ss_pred             EEEECCCHH
Q ss_conf             786225207
Q gi|255764511|r  107 VVFDLGVSS  115 (341)
Q Consensus       107 Il~DLGvSS  115 (341)
                      |++|---+.
T Consensus       138 vfiD~~~~~  146 (221)
T 3hvi_A          138 VFLDHWKDR  146 (221)
T ss_dssp             EEECSCGGG
T ss_pred             EEECCCCHH
T ss_conf             997467020


No 98 
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima MSB8} SCOP: c.66.1.41
Probab=96.91  E-value=0.0013  Score=42.53  Aligned_cols=84  Identities=20%  Similarity=0.254  Sum_probs=59.9

Q ss_pred             CCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             38888899837688288999997489099980998999999998521488527711327889876531233247862252
Q gi|255764511|r   34 PAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGV  113 (341)
Q Consensus        34 ~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGv  113 (341)
                      ..+++.++|.=.|.|.++..+.+.+.+|+|+|..+.++..|+++...     .+++++..+++  +++..+|.|+. +|-
T Consensus        52 ~~~~~~VLDiGCGtG~~~~~la~~g~~v~giD~S~~ml~~Ak~~~~~-----~~~~~~~~~l~--~~~~~fD~Iis-~~~  123 (260)
T 2avn_A           52 LKNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVK-----NVVEAKAEDLP--FPSGAFEAVLA-LGD  123 (260)
T ss_dssp             CCSCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCS-----CEEECCTTSCC--SCTTCEEEEEE-CSS
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECHHHHHHHHHHHCCC-----CCCCCHHHHCC--CCCCCCCHHHH-HHH
T ss_conf             79969899989999888999986199899993523788999883632-----20001575088--86467356550-577


Q ss_pred             HHHHHHHHHHCC
Q ss_conf             078887654073
Q gi|255764511|r  114 SSMQIDCGDRGF  125 (341)
Q Consensus       114 SS~Qld~~~RGF  125 (341)
                      .-.++.++++.|
T Consensus       124 vl~hi~d~~~~l  135 (260)
T 2avn_A          124 VLSYVENKDKAF  135 (260)
T ss_dssp             HHHHCSCHHHHH
T ss_pred             HHHCCCCHHHHH
T ss_conf             741677899999


No 99 
>1r18_A Protein-L-isoaspartate(D-aspartate)-O- methyltransferase; isomerization, protein repair, S- adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=96.89  E-value=0.0077  Score=37.61  Aligned_cols=92  Identities=15%  Similarity=0.274  Sum_probs=67.1

Q ss_pred             CCCHHHHHHHHH--CCCCCCEEEECCCCCCHHHHHHHHH---------CCEEEEECCCHHHHHHHHHHHHHC------CC
Q ss_conf             340098688660--8388888998376882889999974---------890999809989999999985214------88
Q gi|255764511|r   21 VPVLLEKVIALL--NPAPGKVILDATFGAGGYSRSFCKM---------GSNVIALDRDPFAVSCGQETMRDY------KE   83 (341)
Q Consensus        21 ~PVll~Evl~~l--~~~~~g~~iD~TlG~GGHS~~iL~~---------~~~liaiDrD~~ai~~a~~~l~~~------~~   83 (341)
                      -|-|.-.+++.|  +.+|+..++|.=-|.| +..++|..         +.+|+++|.|++.+..|+++++..      -.
T Consensus        67 ~P~~~a~~l~~L~~~l~pg~~VLeIG~GtG-y~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~A~~~l~~~~~~~l~~~  145 (227)
T 1r18_A           67 APHMHAFALEYLRDHLKPGARILDVGSGSG-YLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSG  145 (227)
T ss_dssp             CHHHHHHHHHHTTTTCCTTCEEEEESCTTS-HHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEEECCCCC-HHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHCCCC
T ss_conf             369999999976753899988999579977-9999999985331577766899994789999999999976051020566


Q ss_pred             CEEEECCCHHHHHHHHHHCCCCEEEEECCCHH
Q ss_conf             52771132788987653123324786225207
Q gi|255764511|r   84 QFSLFQATFSQLQDYVPDKGVDGVVFDLGVSS  115 (341)
Q Consensus        84 r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvSS  115 (341)
                      ++.+.+++..+.  +.....+|.|+.+-++..
T Consensus       146 nv~~~~~D~~~g--~~~~~~fD~I~v~~a~~~  175 (227)
T 1r18_A          146 QLLIVEGDGRKG--YPPNAPYNAIHVGAAAPD  175 (227)
T ss_dssp             SEEEEESCGGGC--CGGGCSEEEEEECSCBSS
T ss_pred             CEEEEECCCCCC--CCCCCCCCEEEEEECHHH
T ss_conf             369997784557--765565236888511555


No 100
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltransferase, structural genomics, PSI-2, protein structure initiative; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=96.87  E-value=0.0019  Score=41.50  Aligned_cols=93  Identities=11%  Similarity=0.036  Sum_probs=69.6

Q ss_pred             HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH--CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHC
Q ss_conf             986886608388888998376882889999974--890999809989999999985214885277113278898765312
Q gi|255764511|r   25 LEKVIALLNPAPGKVILDATFGAGGYSRSFCKM--GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDK  102 (341)
Q Consensus        25 l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~--~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~  102 (341)
                      ..+.+..+.+.++..++|.=.|.|..+..+.+.  .++++|+|..+.++..|++++    .++.+......++   ....
T Consensus        22 ~~~ll~~~~~~~~~rVLDiGCGtG~~t~~la~~~~~~~v~gvD~S~~ml~~A~~~~----~~v~~~~~d~~~~---~~~~   94 (259)
T 2p35_A           22 ARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL----PNTNFGKADLATW---KPAQ   94 (259)
T ss_dssp             HHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS----TTSEEEECCTTTC---CCSS
T ss_pred             HHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHC----CCCCCEEEEHHHC---CCCC
T ss_conf             99999528888989899981628699999998789987999989879999999725----6631201424212---4354


Q ss_pred             CCCEEEEECCCHHHHHHHHHHCCC
Q ss_conf             332478622520788876540734
Q gi|255764511|r  103 GVDGVVFDLGVSSMQIDCGDRGFS  126 (341)
Q Consensus       103 ~vdgIl~DLGvSS~Qld~~~RGFS  126 (341)
                      .+|.|+.-  .+-+.+.|+++.|.
T Consensus        95 ~fD~V~s~--~~l~~~~d~~~~l~  116 (259)
T 2p35_A           95 KADLLYAN--AVFQWVPDHLAVLS  116 (259)
T ss_dssp             CEEEEEEE--SCGGGSTTHHHHHH
T ss_pred             CCCEECCC--CEEEECCCHHHHHH
T ss_conf             55564120--15774688899999


No 101
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=96.86  E-value=0.0023  Score=41.03  Aligned_cols=96  Identities=13%  Similarity=0.173  Sum_probs=72.1

Q ss_pred             CCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHH
Q ss_conf             83340098688660838888899837688288999997489099980998999999998521488527711327889876
Q gi|255764511|r   19 DHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDY   98 (341)
Q Consensus        19 ~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~   98 (341)
                      .+.|.+++....++   .++.++|.=.|.|..+..+.+.+.+++|+|..++++..+++++.   +++.++++.+.++.  
T Consensus        28 ~~~~~~~~~~~~~~---~~~~VLDiGCG~G~~~~~l~~~~~~v~giD~s~~~l~~a~~~~~---~~~~~~~~~~~~~~--   99 (250)
T 2p7i_A           28 VMHPFMVRAFTPFF---RPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLK---DGITYIHSRFEDAQ--   99 (250)
T ss_dssp             THHHHHHHHHGGGC---CSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSC---SCEEEEESCGGGCC--
T ss_pred             HHHHHHHHHHHCCC---CCCCEEEEECCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHHH---CCCCEEECCHHHCC--
T ss_conf             99999999853107---99939999289879999999509979999671688889998630---35420202222126--


Q ss_pred             HHHCCCCEEEEECCCHHHHHHHHHHCC
Q ss_conf             531233247862252078887654073
Q gi|255764511|r   99 VPDKGVDGVVFDLGVSSMQIDCGDRGF  125 (341)
Q Consensus        99 l~~~~vdgIl~DLGvSS~Qld~~~RGF  125 (341)
                       ....+|.|++  .-+-.++.+|.+-+
T Consensus       100 -~~~~fD~I~~--~~vleh~~dp~~~L  123 (250)
T 2p7i_A          100 -LPRRYDNIVL--THVLEHIDDPVALL  123 (250)
T ss_dssp             -CSSCEEEEEE--ESCGGGCSSHHHHH
T ss_pred             -CCCCCCHHHH--HHHHHHCCCHHHHH
T ss_conf             -6556657886--42464068999999


No 102
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=96.86  E-value=0.0067  Score=38.01  Aligned_cols=97  Identities=13%  Similarity=0.198  Sum_probs=74.5

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH
Q ss_conf             33400986886608388888998376882889999974890999809989999999985214885277113278898765
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYV   99 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l   99 (341)
                      +.+-.++.+++...+.++..+++.--|.|.=|..+|+...+|+|++.|+......++++..+ +++.++++.+-+++  .
T Consensus        14 ~d~~i~~~Iv~~~~~~~~d~VlEIGpG~G~LT~~L~~~~~~v~avEiD~~l~~~L~~~~~~~-~n~~ii~~D~l~~~--~   90 (244)
T 1qam_A           14 TSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDH-DNFQVLNKDILQFK--F   90 (244)
T ss_dssp             CCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTC-CSEEEECCCGGGCC--C
T ss_pred             CCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCC-CCEEEEECHHHCCC--C
T ss_conf             79999999999567899997999738871999999855583069985301779999741447-76577300122256--5


Q ss_pred             HHCCCCEEEEECCC--HHHHHH
Q ss_conf             31233247862252--078887
Q gi|255764511|r  100 PDKGVDGVVFDLGV--SSMQID  119 (341)
Q Consensus       100 ~~~~vdgIl~DLGv--SS~Qld  119 (341)
                      +...-.-|+.+|=|  ||.=+.
T Consensus        91 ~~~~~~~vv~NLPYnIss~Il~  112 (244)
T 1qam_A           91 PKNQSYKIFGNIPYNISTDIIR  112 (244)
T ss_dssp             CSSCCCEEEEECCGGGHHHHHH
T ss_pred             CCCCCEEEEEECHHHHHHHHHH
T ss_conf             4467547997430552389998


No 103
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assembly S-adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=96.85  E-value=0.0071  Score=37.84  Aligned_cols=96  Identities=16%  Similarity=0.178  Sum_probs=75.9

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH
Q ss_conf             33400986886608388888998376882889999974890999809989999999985214885277113278898765
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYV   99 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l   99 (341)
                      +.+-.++.+++...+.++..+++.--|.|.=|.++|+...+|+|++.|+..+...++++..+ .++.++++.+-.++  +
T Consensus        34 ~d~~i~~kIv~~~~~~~~d~VlEIGpG~G~LT~~Ll~~~~~v~aiEiD~~l~~~L~~~~~~~-~n~~ii~~D~l~~d--~  110 (295)
T 3gru_A           34 IDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELY-NNIEIIWGDALKVD--L  110 (295)
T ss_dssp             CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHC-SSEEEEESCTTTSC--G
T ss_pred             CCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHC-CCEEEEECCCCCCC--H
T ss_conf             89999999999638999995999799746999999816896699998879999999767642-77368851210377--1


Q ss_pred             HHCCCCEEEEECCC--HHHHH
Q ss_conf             31233247862252--07888
Q gi|255764511|r  100 PDKGVDGVVFDLGV--SSMQI  118 (341)
Q Consensus       100 ~~~~vdgIl~DLGv--SS~Ql  118 (341)
                      ......-|+.+|=|  ||.=+
T Consensus       111 ~~~~~~~vv~NLPYnIss~il  131 (295)
T 3gru_A          111 NKLDFNKVVANLPYQISSPIT  131 (295)
T ss_dssp             GGSCCSEEEEECCGGGHHHHH
T ss_pred             HHCCCCEEEEEEHHHHCCHHH
T ss_conf             333755378620264254113


No 104
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold; HET: SAM; 2.00A {Mycobacterium tuberculosis H37RV} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=96.80  E-value=0.012  Score=36.42  Aligned_cols=86  Identities=17%  Similarity=0.195  Sum_probs=67.4

Q ss_pred             CHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH-CCEEEEECCCHHHHHHHHHHHHHCC--CCEEEECCCHHHHHHHH
Q ss_conf             00986886608388888998376882889999974-8909998099899999999852148--85277113278898765
Q gi|255764511|r   23 VLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM-GSNVIALDRDPFAVSCGQETMRDYK--EQFSLFQATFSQLQDYV   99 (341)
Q Consensus        23 Vll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~-~~~liaiDrD~~ai~~a~~~l~~~~--~r~~~~~~~F~~i~~~l   99 (341)
                      =+++.+++.|.+++|..++|.=.|.||-+..+.+. +.+|+|+|.+++.+..++++....+  +++.+....+.++    
T Consensus        77 ~k~~~i~~~l~l~~g~rVLDIGCG~G~~a~~~a~~~g~~v~gi~is~~q~~~a~~~~~~~gl~~~~~~~~~d~~~~----  152 (318)
T 2fk8_A           77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF----  152 (318)
T ss_dssp             HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC----
T ss_pred             HHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHH----
T ss_conf             9999999963999999898978873699999998369638999899999999999987638741001654106550----


Q ss_pred             HHCCCCEEEEECCC
Q ss_conf             31233247862252
Q gi|255764511|r  100 PDKGVDGVVFDLGV  113 (341)
Q Consensus       100 ~~~~vdgIl~DLGv  113 (341)
                       ...+|.|+.-.-+
T Consensus       153 -~~~fD~i~si~~~  165 (318)
T 2fk8_A          153 -AEPVDRIVSIEAF  165 (318)
T ss_dssp             -CCCCSEEEEESCG
T ss_pred             -CCCCCEEEEHHHH
T ss_conf             -3787635204688


No 105
>1im8_A YECO; methyltransferase, adenosylhomocysteine, structural genomics, hypothetical protein, structure 2 function project, S2F; HET: SAI; 2.20A {Haemophilus influenzae rd KW20} SCOP: c.66.1.14
Probab=96.78  E-value=0.0066  Score=38.04  Aligned_cols=99  Identities=10%  Similarity=0.113  Sum_probs=66.6

Q ss_pred             CCHHHHHHHHHC--CCCCCEEEECCCCCCHHHHHHHHH----CCEEEEECCCHHHHHHHHHHHHHCC--CCEEEECCCHH
Q ss_conf             400986886608--388888998376882889999974----8909998099899999999852148--85277113278
Q gi|255764511|r   22 PVLLEKVIALLN--PAPGKVILDATFGAGGYSRSFCKM----GSNVIALDRDPFAVSCGQETMRDYK--EQFSLFQATFS   93 (341)
Q Consensus        22 PVll~Evl~~l~--~~~~g~~iD~TlG~GGHS~~iL~~----~~~liaiDrD~~ai~~a~~~l~~~~--~r~~~~~~~F~   93 (341)
                      ..+.+.+...+.  .+++..++|.=.|.|..+..+++.    +.+++|+|..+.++..|+++++.++  .++.+.++.+.
T Consensus        42 ~~~~~~i~~~~~~~~~~~~~vLDlGcGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~k~~~~~~~~~~~~~~~d~~  121 (244)
T 1im8_A           42 SNIITAIGMLAERFVTADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIR  121 (244)
T ss_dssp             HHHHHHHHHHHHHHCCTTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTT
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf             99999999999986799798999200222889998863369980899976978999999864431065432110123210


Q ss_pred             HHHHHHHHCCCCEEEEECCCHHHHHHHHHHC
Q ss_conf             8987653123324786225207888765407
Q gi|255764511|r   94 QLQDYVPDKGVDGVVFDLGVSSMQIDCGDRG  124 (341)
Q Consensus        94 ~i~~~l~~~~vdgIl~DLGvSS~Qld~~~RG  124 (341)
                      ++    +..+.|.++.-..+.-...++..+-
T Consensus       122 ~~----~~~~~d~i~~~~~l~~~~~~d~~~~  148 (244)
T 1im8_A          122 HV----EIKNASMVILNFTLQFLPPEDRIAL  148 (244)
T ss_dssp             TC----CCCSEEEEEEESCGGGSCGGGHHHH
T ss_pred             CC----CCCCCCEEEEEEEEEECCHHHHHHH
T ss_conf             00----1243212688642230561788999


No 106
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=96.76  E-value=0.0038  Score=39.60  Aligned_cols=75  Identities=15%  Similarity=0.179  Sum_probs=55.5

Q ss_pred             HHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEE
Q ss_conf             6083888889983768828899999748909998099899999999852148852771132788987653123324786
Q gi|255764511|r   31 LLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVF  109 (341)
Q Consensus        31 ~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~  109 (341)
                      .|...+.+.++|.-.|.|.++..+.+.+.+|+|+|..+.|+..|+++.... .++.+....+.+.   .....+|.|+.
T Consensus        46 ~l~~~~~~~vLDvGcG~G~~~~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~i~~~~~d~~~~---~~~~~fD~V~~  120 (216)
T 3ofk_A           46 SLSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRW-SHISWAATDILQF---STAELFDLIVV  120 (216)
T ss_dssp             HTTTSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTC-SSEEEEECCTTTC---CCSCCEEEEEE
T ss_pred             HCCCCCCCEEEEEECCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCC-CEEECCCCCHHHH---CCCCCCCEEEE
T ss_conf             479989990999638898999999970998999969989999999861546-2231010202232---35787148998


No 107
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=96.74  E-value=0.002  Score=41.34  Aligned_cols=80  Identities=19%  Similarity=0.175  Sum_probs=58.7

Q ss_pred             HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHHHHHHHC
Q ss_conf             986886608388888998376882889999974890999809989999999985214--885277113278898765312
Q gi|255764511|r   25 LEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQDYVPDK  102 (341)
Q Consensus        25 l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~~~l~~~  102 (341)
                      +.+.++.+.. +.+.++|.=.|.|.++..+.+.+.+|+|+|..+.|+..++++....  ..++.+.++++.++.   ...
T Consensus        56 l~~~~~~~~~-~~~rVLdlGCG~G~~~~~la~~g~~V~giD~S~~ai~~a~~~~~~~~~~~~v~~~~~D~~~~~---~~~  131 (235)
T 3lcc_A           56 IVHLVDTSSL-PLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR---PTE  131 (235)
T ss_dssp             HHHHHHTTCS-CCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC---CSS
T ss_pred             HHHHHHHCCC-CCCCEEEECCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHC---CCC
T ss_conf             9999985799-999489943888789999986698799974669999999998764154421002325676717---556


Q ss_pred             CCCEEE
Q ss_conf             332478
Q gi|255764511|r  103 GVDGVV  108 (341)
Q Consensus       103 ~vdgIl  108 (341)
                      .+|.|+
T Consensus       132 ~fD~i~  137 (235)
T 3lcc_A          132 LFDLIF  137 (235)
T ss_dssp             CEEEEE
T ss_pred             CCCEEE
T ss_conf             645799


No 108
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=96.73  E-value=0.015  Score=35.82  Aligned_cols=77  Identities=18%  Similarity=0.214  Sum_probs=49.6

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHCC---CCEEEECCCHHHHHHHH-HH-CCCCEEEE
Q ss_conf             888899837688288999997489-09998099899999999852148---85277113278898765-31-23324786
Q gi|255764511|r   36 PGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDYK---EQFSLFQATFSQLQDYV-PD-KGVDGVVF  109 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~~---~r~~~~~~~F~~i~~~l-~~-~~vdgIl~  109 (341)
                      +|..++|+--|.||-|.+.+..+. +|+++|.++.|+..+++..+..+   .+..+++++..+..+.+ .. ..+|.|++
T Consensus       220 ~g~rVLdlf~~tG~~si~Aa~~GA~~V~~vD~s~~al~~a~~N~~~Ngl~~~~~~~i~~d~~~~l~~~~~~~~~fD~Iil  299 (396)
T 3c0k_A          220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM  299 (396)
T ss_dssp             TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEE
T ss_conf             99868753886688999999779975999989899999999999982998434578942299999999875359998998


Q ss_pred             ECC
Q ss_conf             225
Q gi|255764511|r  110 DLG  112 (341)
Q Consensus       110 DLG  112 (341)
                      |-=
T Consensus       300 DPP  302 (396)
T 3c0k_A          300 DPP  302 (396)
T ss_dssp             CCS
T ss_pred             CCC
T ss_conf             783


No 109
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=96.72  E-value=0.0029  Score=40.36  Aligned_cols=81  Identities=19%  Similarity=0.187  Sum_probs=60.6

Q ss_pred             HHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHHHHHH
Q ss_conf             86886608388888998376882889999974---890999809989999999985214--8852771132788987653
Q gi|255764511|r   26 EKVIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQDYVP  100 (341)
Q Consensus        26 ~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~~~l~  100 (341)
                      ..+...|  .||..++|.=.|.|+++..+...   +.+|+|+|.++++++.|+++....  .+++.+.++++.++.   .
T Consensus       110 ~~~~~~l--~~g~~vLDvGcG~G~~~~~l~~~~~p~~~v~gvD~S~~~l~~A~~~~~~~~l~~~~~~~~~d~~~l~---~  184 (305)
T 3ocj_A          110 RALQRHL--RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD---T  184 (305)
T ss_dssp             HHHHHHC--CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC---C
T ss_pred             HHHHHCC--CCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHC---C
T ss_conf             9999409--9959999944747699999999718995899997988899999753022012322233200088742---4


Q ss_pred             HCCCCEEEEEC
Q ss_conf             12332478622
Q gi|255764511|r  101 DKGVDGVVFDL  111 (341)
Q Consensus       101 ~~~vdgIl~DL  111 (341)
                      ..++|.|+...
T Consensus       185 ~~~~d~iv~~~  195 (305)
T 3ocj_A          185 REGYDLLTSNG  195 (305)
T ss_dssp             CSCEEEEECCS
T ss_pred             CCCCCEEEEEC
T ss_conf             66401799813


No 110
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI- 2, protein structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=96.72  E-value=0.018  Score=35.23  Aligned_cols=96  Identities=17%  Similarity=0.080  Sum_probs=67.4

Q ss_pred             CCCCCCCCHHHHHHH------HHC-CCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHC--C-CCE
Q ss_conf             607833400986886------608-388888998376882889999974890999809989999999985214--8-852
Q gi|255764511|r   16 TIGDHVPVLLEKVIA------LLN-PAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDY--K-EQF   85 (341)
Q Consensus        16 ~~~~H~PVll~Evl~------~l~-~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~--~-~r~   85 (341)
                      +.+.|+-+.++.-..      .+. ..++..++|+=-|.||.|.+.+..+.+|+++|..+.|+..|+++.+-.  . .++
T Consensus       126 ~~g~ktG~FlDqr~nr~~l~~~~~~~~kg~rVLdlF~ytG~~sl~aa~~GA~V~~VD~s~~al~~a~~N~~lNg~~~~~~  205 (332)
T 2igt_A          126 TAFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPI  205 (332)
T ss_dssp             CSSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCE
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCE
T ss_conf             77875634521066899999986631589758872677777899999789849999387999999999999848988858


Q ss_pred             EEECCCHHH-HHHHHHH-CCCCEEEEEC
Q ss_conf             771132788-9876531-2332478622
Q gi|255764511|r   86 SLFQATFSQ-LQDYVPD-KGVDGVVFDL  111 (341)
Q Consensus        86 ~~~~~~F~~-i~~~l~~-~~vdgIl~DL  111 (341)
                      .+++++.-+ +...... ..+|.|++|-
T Consensus       206 ~~i~~Da~~~l~~~~~~g~~fD~IilDP  233 (332)
T 2igt_A          206 RWICEDAMKFIQREERRGSTYDIILTDP  233 (332)
T ss_dssp             EEECSCHHHHHHHHHHHTCCBSEEEECC
T ss_pred             EEEECCHHHHHHHHHHHCCCCCEEEECC
T ss_conf             9992679999999997189976899789


No 111
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=96.69  E-value=0.0068  Score=37.94  Aligned_cols=84  Identities=15%  Similarity=0.124  Sum_probs=60.7

Q ss_pred             HHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH-CCC
Q ss_conf             8866083888889983768828899999748--9099980998999999998521488527711327889876531-233
Q gi|255764511|r   28 VIALLNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPD-KGV  104 (341)
Q Consensus        28 vl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~-~~v  104 (341)
                      -++.|.++||..++|.-.|.|..+..+.+..  ++|+|+|..|.++..++++.+.. .++.++...-.....+... ..+
T Consensus        66 ~l~~l~ikpg~~VLDlGcGtG~~~~~la~~~~~G~V~aVDiSp~mi~~a~~~a~~~-~ni~~i~~d~~~~~~~~~~~~~v  144 (230)
T 1fbn_A           66 GLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIVEKV  144 (230)
T ss_dssp             TCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTSCCE
T ss_pred             HHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHC-CCCEEEEEECCCCCCCCCCCCEE
T ss_conf             57626879999999967977989999997589965999979989999999877644-87317984135864235666359


Q ss_pred             CEEEEECC
Q ss_conf             24786225
Q gi|255764511|r  105 DGVVFDLG  112 (341)
Q Consensus       105 dgIl~DLG  112 (341)
                      |-++.|+-
T Consensus       145 d~i~~~~~  152 (230)
T 1fbn_A          145 DVIYEDVA  152 (230)
T ss_dssp             EEEEECCC
T ss_pred             EEEEEECC
T ss_conf             99971012


No 112
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.30A {Bacillus cereus atcc 14579} PDB: 2gh1_A
Probab=96.67  E-value=0.0047  Score=38.97  Aligned_cols=88  Identities=11%  Similarity=0.115  Sum_probs=67.8

Q ss_pred             CCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEE
Q ss_conf             8388888998376882889999974---8909998099899999999852148852771132788987653123324786
Q gi|255764511|r   33 NPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVF  109 (341)
Q Consensus        33 ~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~  109 (341)
                      .+.++..++|.-.|.|..+..+.+.   +++|+|+|.++.++..|+++.+..+.++.+.++++.++.   ....+|.|+.
T Consensus        19 k~~~~~~ILDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~---~~~~fD~V~~   95 (284)
T 3gu3_A           19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE---LNDKYDIAIC   95 (284)
T ss_dssp             CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCC---CSSCEEEEEE
T ss_pred             CCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEECCCCCCCC---CCCCEEEEEE
T ss_conf             5699897999548798999999985779988999849899999999866641420012001112479---8997579988


Q ss_pred             ECCCHHHHHHHHHHCC
Q ss_conf             2252078887654073
Q gi|255764511|r  110 DLGVSSMQIDCGDRGF  125 (341)
Q Consensus       110 DLGvSS~Qld~~~RGF  125 (341)
                      ...  .+++.+++..+
T Consensus        96 ~~~--l~h~~d~~~~l  109 (284)
T 3gu3_A           96 HAF--LLHMTTPETML  109 (284)
T ss_dssp             ESC--GGGCSSHHHHH
T ss_pred             HHH--HHCCCCHHHHH
T ss_conf             647--65678899999


No 113
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; HET: MSE; 1.90A {Bacillus halodurans c-125}
Probab=96.67  E-value=0.015  Score=35.72  Aligned_cols=99  Identities=14%  Similarity=0.150  Sum_probs=74.4

Q ss_pred             CCCCCCHHHHHHHHHC----CCCCCEEEECCCCCCHHHHHHHHH--CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEEC
Q ss_conf             7833400986886608----388888998376882889999974--890999809989999999985214--88527711
Q gi|255764511|r   18 GDHVPVLLEKVIALLN----PAPGKVILDATFGAGGYSRSFCKM--GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQ   89 (341)
Q Consensus        18 ~~H~PVll~Evl~~l~----~~~~g~~iD~TlG~GGHS~~iL~~--~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~   89 (341)
                      ..+.|++-.++.++|.    ..+...+++-..|.|.-|..+...  .++|+++|.+++....|++.++..  .+++.++.
T Consensus        32 ~~~~pii~~~~~~~l~~l~~~~~~~~VLEIGtg~G~Stl~la~~~p~~~v~tiD~~~~~~~~A~~~~~~~gl~~~I~~~~  111 (233)
T 2gpy_A           32 EQQVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLF  111 (233)
T ss_dssp             HTTCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEEC
T ss_pred             HCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             75999778899999999988658998999611212999999987899779999704899999999999974212112653


Q ss_pred             CCHHHHHHHHH-HCCCCEEEEECCCHHH
Q ss_conf             32788987653-1233247862252078
Q gi|255764511|r   90 ATFSQLQDYVP-DKGVDGVVFDLGVSSM  116 (341)
Q Consensus        90 ~~F~~i~~~l~-~~~vdgIl~DLGvSS~  116 (341)
                      ++..++...+. ...+|.|+.|-.-..+
T Consensus       112 gda~d~l~~l~~~~~fD~ifiD~~k~~~  139 (233)
T 2gpy_A          112 GDALQLGEKLELYPLFDVLFIDAAKGQY  139 (233)
T ss_dssp             SCGGGSHHHHTTSCCEEEEEEEGGGSCH
T ss_pred             CCHHHHHHHHCCCCCCCEEEECCCHHHH
T ss_conf             3287777751135776289972766768


No 114
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=96.66  E-value=0.0058  Score=38.41  Aligned_cols=63  Identities=19%  Similarity=0.283  Sum_probs=48.7

Q ss_pred             CCCHHHHHHHH--HCCCCCCEEEECCCCCCHHHHHHHHHC-CEEEEECCCHHHHHHHHHHHHHCCC
Q ss_conf             34009868866--083888889983768828899999748-9099980998999999998521488
Q gi|255764511|r   21 VPVLLEKVIAL--LNPAPGKVILDATFGAGGYSRSFCKMG-SNVIALDRDPFAVSCGQETMRDYKE   83 (341)
Q Consensus        21 ~PVll~Evl~~--l~~~~~g~~iD~TlG~GGHS~~iL~~~-~~liaiDrD~~ai~~a~~~l~~~~~   83 (341)
                      ..+|+...++-  +.+..+..++|--.|.||+....++.+ .+|+|+|.++++|..|++|......
T Consensus        31 K~~lI~~~~~~~~~~~~~~~~VLDlgcG~GgDl~K~~~~~~~~vvGiDiS~~~I~~A~~R~~~~~~   96 (302)
T 2vdw_A           31 KTLLISMYCSKTFLDDSNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNS   96 (302)
T ss_dssp             HHHHHHHHTCTTTSSCCSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHCCCCCCCEEEEEEEEECHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCC
T ss_conf             999999998775026888997999950004527999966998899997989999999999997212


No 115
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, NYSGXRC, structural genomics; 2.00A {Lactobacillus delbrueckii subsp}
Probab=96.63  E-value=0.019  Score=35.13  Aligned_cols=94  Identities=18%  Similarity=0.159  Sum_probs=59.2

Q ss_pred             HHCCCCCCCC-CCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHCC-CCEEEE
Q ss_conf             1011607833-40098688660838888899837688288999997489-09998099899999999852148-852771
Q gi|255764511|r   12 AIHHTIGDHV-PVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDYK-EQFSLF   88 (341)
Q Consensus        12 ~~~~~~~~H~-PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~~-~r~~~~   88 (341)
                      .+.--++.|. .-|.-+.|+.. +.++..++|.=.|.|..+.++.+.+. +|+|+|.||+|+..|+++.+..+ ..+...
T Consensus        36 ~~aFGtG~H~tT~l~l~~L~~~-~~~~~~VLDlGcGsG~~~~~~ak~g~~~V~~iDis~~al~~A~~N~~~n~~~~~~~~  114 (205)
T 3grz_A           36 GLAFGTGNHQTTQLAMLGIERA-MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQ  114 (205)
T ss_dssp             C-----CCHHHHHHHHHHHHHH-CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred             CCCCCCCCCHHHHHHHHHHHHC-CCCCCEEEEEECCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             4466799888999999999834-799599999952622999999875996899998989999999999997376676887


Q ss_pred             CCCHHHHHHHHHHCCCCEEEEE
Q ss_conf             1327889876531233247862
Q gi|255764511|r   89 QATFSQLQDYVPDKGVDGVVFD  110 (341)
Q Consensus        89 ~~~F~~i~~~l~~~~vdgIl~D  110 (341)
                      ....-.    .....+|-|+++
T Consensus       115 ~~~~~~----~~~~~fD~Ivan  132 (205)
T 3grz_A          115 KTSLLA----DVDGKFDLIVAN  132 (205)
T ss_dssp             ESSTTT----TCCSCEEEEEEE
T ss_pred             ECCHHH----CCCCCCCEEEEC
T ss_conf             343444----045556899985


No 116
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O- methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, RNA-binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} PDB: 3id5_B*
Probab=96.62  E-value=0.0094  Score=37.03  Aligned_cols=84  Identities=13%  Similarity=0.050  Sum_probs=58.8

Q ss_pred             HHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH-HHCCC
Q ss_conf             86608388888998376882889999974---890999809989999999985214885277113278898765-31233
Q gi|255764511|r   29 IALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYV-PDKGV  104 (341)
Q Consensus        29 l~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l-~~~~v  104 (341)
                      ++.+.++||..++|--.|.|..+..+.+.   .++|||+|..|.++..+.++.+..+ ++..+.....+...+- ....+
T Consensus        69 l~~~~lkpG~~VLdLG~G~G~~~~~la~~Vg~~G~V~aVD~s~~~l~~a~~~a~~~~-n~~~v~~d~~~~~~~~~~~~~v  147 (232)
T 3id6_C           69 LKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRP-NIFPLLADARFPQSYKSVVENV  147 (232)
T ss_dssp             CSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCT-TEEEEECCTTCGGGTTTTCCCE
T ss_pred             HHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCC-CCCCEEECCCCHHHCCCCCCEE
T ss_conf             330588999999996771889999999971568769999799999999997656546-7763010146754537777369


Q ss_pred             CEEEEECCC
Q ss_conf             247862252
Q gi|255764511|r  105 DGVVFDLGV  113 (341)
Q Consensus       105 dgIl~DLGv  113 (341)
                      |.|+.|+..
T Consensus       148 d~i~~~~~~  156 (232)
T 3id6_C          148 DVLYVDIAQ  156 (232)
T ss_dssp             EEEEECCCC
T ss_pred             EEEEEECCC
T ss_conf             999985257


No 117
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=96.62  E-value=0.023  Score=34.57  Aligned_cols=77  Identities=14%  Similarity=0.258  Sum_probs=62.4

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHCC--EEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHHHCCCCEEEEECC
Q ss_conf             888899837688288999997489--09998099899999999852148-852771132788987653123324786225
Q gi|255764511|r   36 PGKVILDATFGAGGYSRSFCKMGS--NVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVPDKGVDGVVFDLG  112 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS~~iL~~~~--~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~~~~vdgIl~DLG  112 (341)
                      ++-+++|-=+|.|.++..+.+.++  +++|+|..+.++..+.++.+..+ +++.++++++..+.+......+|.|+...-
T Consensus        38 ~~p~vLEIGcG~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~da~~l~~~~~~~~~d~v~i~fp  117 (213)
T 2fca_A           38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS  117 (213)
T ss_dssp             CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred             CCCEEEEEECCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCEEEEEEECC
T ss_conf             99529998035889999999868998289998359999999999998388544678436588775137764358887135


No 118
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural genomics, joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=96.62  E-value=0.009  Score=37.15  Aligned_cols=61  Identities=16%  Similarity=0.117  Sum_probs=50.1

Q ss_pred             CCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHH
Q ss_conf             388888998376882889999974890999809989999999985214885277113278898
Q gi|255764511|r   34 PAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQ   96 (341)
Q Consensus        34 ~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~   96 (341)
                      ..++..++|.=.|.|..+..+.+.+.+|+|+|.++.++..|+++...  .++.+.+.+..++.
T Consensus        54 ~~~~~~vLDvGCG~G~~~~~la~~g~~v~gvD~s~~~i~~Ar~~~~~--~~~~~~~~d~~~~~  114 (245)
T 3ggd_A           54 FNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTA--ANISYRLLDGLVPE  114 (245)
T ss_dssp             SCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCC--TTEEEEECCTTCHH
T ss_pred             CCCCCEEEEECCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCC--CCEEEEEEECCCCC
T ss_conf             69998589975879787999763784599850999999999986746--75069995013653


No 119
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=96.61  E-value=0.0046  Score=39.08  Aligned_cols=85  Identities=15%  Similarity=0.107  Sum_probs=64.7

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECC
Q ss_conf             888889983768828899999748--909998099899999999852148852771132788987653123324786225
Q gi|255764511|r   35 APGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLG  112 (341)
Q Consensus        35 ~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLG  112 (341)
                      .+++.++|.=.|.|..+..++..+  .+++|+|.++.++..+++++...+.++.+.......   ..+...+|.|++  -
T Consensus       131 ~~~~~vlD~GcG~G~~~~~l~~~~~~~~v~g~D~s~~~i~~a~~~~~~~~~~~~~~~~d~~~---~~~~~~fD~v~~--~  205 (281)
T 3lcv_B          131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLE---DRLDEPADVTLL--L  205 (281)
T ss_dssp             CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTT---SCCCSCCSEEEE--T
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECHHH---HCCCCCCCEEEE--H
T ss_conf             99986998389888899999974997749996599999999999998668873899813544---076556567765--3


Q ss_pred             CHHHHHHHHHHC
Q ss_conf             207888765407
Q gi|255764511|r  113 VSSMQIDCGDRG  124 (341)
Q Consensus       113 vSS~Qld~~~RG  124 (341)
                      -+-+++++.+++
T Consensus       206 ~vl~hl~~~~~~  217 (281)
T 3lcv_B          206 KTLPCLETQQRG  217 (281)
T ss_dssp             TCHHHHHHHSTT
T ss_pred             HHHHHCCHHHHH
T ss_conf             448754927799


No 120
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=96.59  E-value=0.0085  Score=37.34  Aligned_cols=86  Identities=17%  Similarity=0.234  Sum_probs=62.3

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHHC------CCCEEEECCCHHHH
Q ss_conf             09868866083888889983768828899999748--90999809989999999985214------88527711327889
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRDY------KEQFSLFQATFSQL   95 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~~------~~r~~~~~~~F~~i   95 (341)
                      .++.+++.|....+..++|.=.|.|..+..+++.+  .+|+|+|.+++++..|++++...      ..++.+.......+
T Consensus        17 r~~~v~~~l~~~~~~rVLDvGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (217)
T 3jwh_A           17 RMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ   96 (217)
T ss_dssp             HHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC
T ss_pred             HHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHC
T ss_conf             99999997332183989998188879999999847652252103899999999998876245311222210012664344


Q ss_pred             HHHHHHCCCCEEEEEC
Q ss_conf             8765312332478622
Q gi|255764511|r   96 QDYVPDKGVDGVVFDL  111 (341)
Q Consensus        96 ~~~l~~~~vdgIl~DL  111 (341)
                      .  .+...+|.|+.-.
T Consensus        97 ~--~~~~~fD~I~~~~  110 (217)
T 3jwh_A           97 D--KRFHGYDAATVIE  110 (217)
T ss_dssp             C--GGGCSCSEEEEES
T ss_pred             H--HCCCCCCEEEEEH
T ss_conf             0--0047656550103


No 121
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=96.59  E-value=0.023  Score=34.49  Aligned_cols=69  Identities=29%  Similarity=0.430  Sum_probs=53.6

Q ss_pred             CHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCH
Q ss_conf             009868866083888889983768828899999748--909998099899999999852148-8527711327
Q gi|255764511|r   23 VLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATF   92 (341)
Q Consensus        23 Vll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F   92 (341)
                      .|++.++......+ ..++|.-.|.|-=+.++....  .+++|+|.+++|+..|+++.+.++ .++.++++++
T Consensus        97 ~lv~~~l~~~~~~~-~~ilDlgtGsG~I~i~la~~~p~~~v~a~Dis~~Al~~A~~Na~~~~~~~v~~~~~D~  168 (276)
T 2b3t_A           97 CLVEQALARLPEQP-CRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDW  168 (276)
T ss_dssp             HHHHHHHHHSCSSC-CEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCST
T ss_pred             HHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf             99999987514578-6176414653299999998689875886417668899999999974998779997576


No 122
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=96.58  E-value=0.011  Score=36.66  Aligned_cols=70  Identities=16%  Similarity=0.136  Sum_probs=57.9

Q ss_pred             CCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH-CC-EEEEECCCHHHHHHHHHHHHHCCC
Q ss_conf             11607833400986886608388888998376882889999974-89-099980998999999998521488
Q gi|255764511|r   14 HHTIGDHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM-GS-NVIALDRDPFAVSCGQETMRDYKE   83 (341)
Q Consensus        14 ~~~~~~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~-~~-~liaiDrD~~ai~~a~~~l~~~~~   83 (341)
                      ....++=-|=++.++++.+.+.++.+++|-=.|.|+.+..+... ++ +++|+|..+.++..|++..+++..
T Consensus       220 ~~vYGE~~p~~i~~Il~~l~Lkpgd~fLDLGCG~G~vvl~aA~~~g~~~viGIDis~~~l~~A~~~~~e~~~  291 (433)
T 1u2z_A          220 NYVYGELLPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKK  291 (433)
T ss_dssp             GGCCCCBCHHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHH
T ss_pred             CCEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHH
T ss_conf             763000688999999998289999989974899989999999975998799997999999999999999887


No 123
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=96.58  E-value=0.0086  Score=37.29  Aligned_cols=58  Identities=19%  Similarity=0.248  Sum_probs=50.2

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC--EEEEECCCHHHHHHHHHHHHHC
Q ss_conf             098688660838888899837688288999997489--0999809989999999985214
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGS--NVIALDRDPFAVSCGQETMRDY   81 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~--~liaiDrD~~ai~~a~~~l~~~   81 (341)
                      .+.++++.|...++..++|.=.|.|..+..+.+.++  +|+|+|.++.++..|++++...
T Consensus        17 r~~~v~~~l~~~~~~rVLDvGCG~G~~~~~La~~~~~~~v~gvD~s~~~l~~a~~~~~~~   76 (219)
T 3jwg_A           17 RLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKID   76 (219)
T ss_dssp             HHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGG
T ss_pred             HHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC
T ss_conf             999999964112849899981878999999998389745632259999999999986550


No 124
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51
Probab=96.55  E-value=0.019  Score=35.09  Aligned_cols=77  Identities=13%  Similarity=0.107  Sum_probs=59.9

Q ss_pred             CCCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHCC---CCEEEECCCHHH-HHHHHHH-CCCCEE
Q ss_conf             38888899837688288999997489-09998099899999999852148---852771132788-9876531-233247
Q gi|255764511|r   34 PAPGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDYK---EQFSLFQATFSQ-LQDYVPD-KGVDGV  107 (341)
Q Consensus        34 ~~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~~---~r~~~~~~~F~~-i~~~l~~-~~vdgI  107 (341)
                      ..+|..++|+--|.||-|.+.+..+. .|+++|.++.|+..+++..+-.+   +++.++.++.-+ +...... ..+|.|
T Consensus       210 ~~~g~rVLDlfs~tGgfsl~aa~~gA~~V~~vD~s~~a~~~a~~N~~~N~l~~~~~~~~~~D~~~~L~~~~~~~~~fD~I  289 (385)
T 2b78_A          210 SAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII  289 (385)
T ss_dssp             TTBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred             HCCCCCEEEECCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCCEE
T ss_conf             55999168636768789999987799588852676999999999899848997644777266999999998648988889


Q ss_pred             EEE
Q ss_conf             862
Q gi|255764511|r  108 VFD  110 (341)
Q Consensus       108 l~D  110 (341)
                      ++|
T Consensus       290 ilD  292 (385)
T 2b78_A          290 IID  292 (385)
T ss_dssp             EEC
T ss_pred             EEC
T ss_conf             989


No 125
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.53  E-value=0.0093  Score=37.06  Aligned_cols=74  Identities=20%  Similarity=0.262  Sum_probs=54.9

Q ss_pred             HHCCCCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEE
Q ss_conf             60838888899837688288999997489-09998099899999999852148852771132788987653123324786
Q gi|255764511|r   31 LLNPAPGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVF  109 (341)
Q Consensus        31 ~l~~~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~  109 (341)
                      .+....|..++|.-.|.|.-+.+.+..++ +|+|+|.|++|+..|++++.    ++.+++++..++     ..++|-|+.
T Consensus        46 ~~gd~~Gk~VLDlGcGtG~l~i~a~~~ga~~V~~vDid~~a~~~a~~N~~----~~~~~~~d~~~~-----~~~fD~Vi~  116 (200)
T 1ne2_A           46 NDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSEI-----SGKYDTWIM  116 (200)
T ss_dssp             HHTSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGGC-----CCCEEEEEE
T ss_pred             HCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH----HCCCEEEEHHHC-----CCCCCEEEE
T ss_conf             66998939899875751099999996799879675089999999999898----578537652105-----775488987


Q ss_pred             ECCC
Q ss_conf             2252
Q gi|255764511|r  110 DLGV  113 (341)
Q Consensus       110 DLGv  113 (341)
                      |-=+
T Consensus       117 NPPf  120 (200)
T 1ne2_A          117 NPPF  120 (200)
T ss_dssp             CCCC
T ss_pred             CCCC
T ss_conf             7986


No 126
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=96.51  E-value=0.014  Score=35.96  Aligned_cols=91  Identities=16%  Similarity=0.242  Sum_probs=73.5

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCC--CCEEEECCCHHHHHH
Q ss_conf             334009868866083888889983768828899999748909998099899999999852148--852771132788987
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYK--EQFSLFQATFSQLQD   97 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~--~r~~~~~~~F~~i~~   97 (341)
                      ..|-.++.+++...+.++..++..--|.|.=|.++|+.+.+|+|++.|+..+...++++..+.  .++.++++.+-.++-
T Consensus        12 ~d~~i~~~Iv~~~~~~~~d~VlEIGPG~G~LT~~Ll~~~~~v~aiE~D~~l~~~L~~~~~~~~~~~~~~ii~~D~l~~d~   91 (285)
T 1zq9_A           12 KNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL   91 (285)
T ss_dssp             CCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC
T ss_pred             CCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCCEEEECHHHHHCHH
T ss_conf             79899999999708999997999689721999999804996699998789999999876201210034454066541105


Q ss_pred             HHHHCCCCEEEEECCCH
Q ss_conf             65312332478622520
Q gi|255764511|r   98 YVPDKGVDGVVFDLGVS  114 (341)
Q Consensus        98 ~l~~~~vdgIl~DLGvS  114 (341)
                          ....-++.+|=|+
T Consensus        92 ----~~~~~vVgNLPYn  104 (285)
T 1zq9_A           92 ----PFFDTCVANLPYQ  104 (285)
T ss_dssp             ----CCCSEEEEECCGG
T ss_pred             ----HHHHHEECCCHHH
T ss_conf             ----5443211022165


No 127
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.90A {Geobacter sulfurreducens pca}
Probab=96.50  E-value=0.015  Score=35.66  Aligned_cols=95  Identities=18%  Similarity=0.222  Sum_probs=66.2

Q ss_pred             CCCCCHHHHHHHHHC----CCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEEC
Q ss_conf             833400986886608----388888998376882889999974---890999809989999999985214--88527711
Q gi|255764511|r   19 DHVPVLLEKVIALLN----PAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQ   89 (341)
Q Consensus        19 ~H~PVll~Evl~~l~----~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~   89 (341)
                      .+.|.+-.++-.+|.    ..+...+++--.|.|.-|..+.+.   +++|+++|.|++.++.|++.++..  .+++.+++
T Consensus        35 ~~~p~i~~~~g~~L~~L~~~~~~~~ILEiGtg~G~st~~la~~~~~~g~v~~id~~~~~~~~ar~~~~~~g~~~~i~~~~  114 (210)
T 3c3p_A           35 RNIPIVDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQV  114 (210)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEE
T ss_conf             39997898999999999885680989995081439999999975568199999775103789998798729873267861


Q ss_pred             CCHHHHHHHHHHCCCCEEEEECCCHH
Q ss_conf             32788987653123324786225207
Q gi|255764511|r   90 ATFSQLQDYVPDKGVDGVVFDLGVSS  115 (341)
Q Consensus        90 ~~F~~i~~~l~~~~vdgIl~DLGvSS  115 (341)
                      ++..++..  ....+|.|+.|.....
T Consensus       115 gda~~~~~--~~~~fDlifiD~~~~~  138 (210)
T 3c3p_A          115 GDPLGIAA--GQRDIDILFMDCDVFN  138 (210)
T ss_dssp             SCHHHHHT--TCCSEEEEEEETTTSC
T ss_pred             CCHHHCCC--CCCCCCEEEECCCHHH
T ss_conf             34543022--3688678998575666


No 128
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=96.48  E-value=0.0096  Score=36.98  Aligned_cols=61  Identities=20%  Similarity=0.251  Sum_probs=49.5

Q ss_pred             CCCHHHHHHHHH--CCCCCCEEEECCCCCCHHHHHHHHHC-CEEEEECCCHHHHHHHHHHHHHC
Q ss_conf             340098688660--83888889983768828899999748-90999809989999999985214
Q gi|255764511|r   21 VPVLLEKVIALL--NPAPGKVILDATFGAGGYSRSFCKMG-SNVIALDRDPFAVSCGQETMRDY   81 (341)
Q Consensus        21 ~PVll~Evl~~l--~~~~~g~~iD~TlG~GGHS~~iL~~~-~~liaiDrD~~ai~~a~~~l~~~   81 (341)
                      ..+|....+..+  ...++..++|.-.|.||+....++.+ ++++|+|.++++|..|+++....
T Consensus        17 K~~LI~~~~~~~~~~~~~~~~VLDlGCG~G~dl~k~~~~~~~~v~GiDis~~~i~~A~~r~~~~   80 (313)
T 3bgv_A           17 KSVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDM   80 (313)
T ss_dssp             HHHHHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHC
T ss_conf             9999999998743157897979997347768899999659997999959999999999998854


No 129
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 2zzm_A*
Probab=96.47  E-value=0.011  Score=36.62  Aligned_cols=73  Identities=15%  Similarity=0.235  Sum_probs=48.0

Q ss_pred             CCCHHHHHHHHHC-CCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHH
Q ss_conf             3400986886608-388888998376882889999974890999809989999999985214--8852771132788
Q gi|255764511|r   21 VPVLLEKVIALLN-PAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQ   94 (341)
Q Consensus        21 ~PVll~Evl~~l~-~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~   94 (341)
                      .|.+..|-..... ..++..++|+--|.|+-+.++. ...+|+|+|.+|.|+..++++.+..  .+++.++++...+
T Consensus       179 ~~~~~~er~ri~~~~~~~~~vlD~f~g~G~~~i~~~-~~~~v~a~d~n~~a~~~~~~N~~~N~~~~~v~~~~~D~~~  254 (336)
T 2yx1_A          179 SPRLGGERARIMKKVSLNDVVVDMFAGVGPFSIACK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVRE  254 (336)
T ss_dssp             CGGGHHHHHHHHHHCCTTCEEEETTCTTSHHHHHTT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred             CCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCC-CCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCHHH
T ss_conf             476107888766411789889996576467665313-5516999979999999999999982998758999575345


No 130
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} PDB: 1kpi_A*
Probab=96.47  E-value=0.036  Score=33.27  Aligned_cols=81  Identities=21%  Similarity=0.236  Sum_probs=64.5

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH-CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHHHHHH
Q ss_conf             0986886608388888998376882889999974-890999809989999999985214--8852771132788987653
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM-GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQDYVP  100 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~-~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~~~l~  100 (341)
                      +++.+++.+.+++|..++|.=.|-||-+..+.+. +++|+|++..++-+..++++.++.  .+++.+....+...     
T Consensus        60 k~~~~~~~l~l~~g~rVLDiGCGwG~~a~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~~~~~d~~~~-----  134 (302)
T 3hem_A           60 KRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-----  134 (302)
T ss_dssp             HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-----
T ss_pred             HHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC-----
T ss_conf             999999970899989898857885399999999869838998377889999999998740021233444043234-----


Q ss_pred             HCCCCEEEE
Q ss_conf             123324786
Q gi|255764511|r  101 DKGVDGVVF  109 (341)
Q Consensus       101 ~~~vdgIl~  109 (341)
                      +..+|.|+.
T Consensus       135 ~~~fD~ivS  143 (302)
T 3hem_A          135 DEPVDRIVS  143 (302)
T ss_dssp             CCCCSEEEE
T ss_pred             CCCCCEEEE
T ss_conf             788675531


No 131
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=96.47  E-value=0.0072  Score=37.80  Aligned_cols=52  Identities=29%  Similarity=0.533  Sum_probs=43.3

Q ss_pred             HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             68866083888889983768828899999748909998099899999999852
Q gi|255764511|r   27 KVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMR   79 (341)
Q Consensus        27 Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~   79 (341)
                      ..++.+.+ +++.++|.-.|.|..+..+.+.+.+|+|+|..++++..|+++..
T Consensus        38 ~ll~~~~~-~~~~vLDlGCG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~   89 (195)
T 3cgg_A           38 RLIDAMAP-RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFP   89 (195)
T ss_dssp             HHHHHHSC-TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT
T ss_pred             HHHHHCCC-CCCEEEEECCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC
T ss_conf             99996589-99989997688859999999769989999797277899997302


No 132
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=96.46  E-value=0.032  Score=33.60  Aligned_cols=93  Identities=14%  Similarity=0.217  Sum_probs=75.2

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH-CCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHH
Q ss_conf             33400986886608388888998376882889999974-8909998099899999999852148-852771132788987
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM-GSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQD   97 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~-~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~   97 (341)
                      -.|-|+-.+++.|+++++..+++-=-|. |+..++|.. .+.+++++.+++....++++++..+ .++.+++++..+  .
T Consensus        61 s~P~~~A~~l~~L~~~~g~~VLeIGsGt-GY~tAlla~l~~~v~~ve~~~~~~~~a~~~~~~~~~~nv~~~~gdg~~--g  137 (210)
T 3lbf_A           61 SQPYMVARMTELLELTPQSRVLEIGTGS-GYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQ--G  137 (210)
T ss_dssp             CCHHHHHHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG--C
T ss_pred             CCCHHHHHHHHHCCCCCCCEEEEECCCH-HHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC--C
T ss_conf             4436747678756568998799967840-699999998628325454222899999999886266671799857776--7


Q ss_pred             HHHHCCCCEEEEECCCHH
Q ss_conf             653123324786225207
Q gi|255764511|r   98 YVPDKGVDGVVFDLGVSS  115 (341)
Q Consensus        98 ~l~~~~vdgIl~DLGvSS  115 (341)
                      +.....+|.|+..-++..
T Consensus       138 ~~~~~pyD~Iiv~~a~~~  155 (210)
T 3lbf_A          138 WQARAPFDAIIVTAAPPE  155 (210)
T ss_dssp             CGGGCCEEEEEESSBCSS
T ss_pred             CCCCCCCCEEEEEECCCH
T ss_conf             755698037999641202


No 133
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=96.46  E-value=0.026  Score=34.24  Aligned_cols=86  Identities=15%  Similarity=0.134  Sum_probs=61.2

Q ss_pred             HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC--EEEEECCCHHHHHHHHHHHHHCC--CCEEEECCCHHHHHHHHH
Q ss_conf             98688660838888899837688288999997489--09998099899999999852148--852771132788987653
Q gi|255764511|r   25 LEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGS--NVIALDRDPFAVSCGQETMRDYK--EQFSLFQATFSQLQDYVP  100 (341)
Q Consensus        25 l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~--~liaiDrD~~ai~~a~~~l~~~~--~r~~~~~~~F~~i~~~l~  100 (341)
                      |..+.+++  .+|..++|+=.|.|.-+.++++.+.  +|+|+|.++.++..|+++++.++  +++.+++++.-+.  ...
T Consensus         6 L~~i~~~v--~~g~~ilDiG~g~G~~~~~l~~~~~~~~v~avDi~~~~l~~a~~n~~~~~l~~~i~~~~~D~~~~--~~~   81 (225)
T 3kr9_A            6 LELVASFV--SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA--FEE   81 (225)
T ss_dssp             HHHHHTTS--CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG--CCG
T ss_pred             HHHHHHHC--CCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCHH--HHC
T ss_conf             99999558--99898999618569999999980999889971099999999999999829998779998874132--203


Q ss_pred             HCCCCEEE-EECCCH
Q ss_conf             12332478-622520
Q gi|255764511|r  101 DKGVDGVV-FDLGVS  114 (341)
Q Consensus       101 ~~~vdgIl-~DLGvS  114 (341)
                      ...+|.|+ +..|..
T Consensus        82 ~~~~d~iviag~g~~   96 (225)
T 3kr9_A           82 TDQVSVITIAGMGGR   96 (225)
T ss_dssp             GGCCCEEEEEEECHH
T ss_pred             CCCCCHHHCCCCCHH
T ss_conf             466772105387789


No 134
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=96.43  E-value=0.021  Score=34.81  Aligned_cols=93  Identities=13%  Similarity=0.065  Sum_probs=67.9

Q ss_pred             CCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC--EEEEECCCHHHHHHHHHHHHHCC--CCEEEECCCHHH
Q ss_conf             83340098688660838888899837688288999997489--09998099899999999852148--852771132788
Q gi|255764511|r   19 DHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGS--NVIALDRDPFAVSCGQETMRDYK--EQFSLFQATFSQ   94 (341)
Q Consensus        19 ~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~--~liaiDrD~~ai~~a~~~l~~~~--~r~~~~~~~F~~   94 (341)
                      ++.+-=|..+.+++  .+|..++|.-.|-|.-+..+++.+.  +|+|+|.+|.++..|+++++.++  +++.+++++--+
T Consensus         6 m~ls~RL~~ia~~v--~~g~~vlDIG~g~G~l~i~l~~~~~~~~viavDi~~~~l~~A~~n~~~~gl~~~I~~~~~Dgl~   83 (230)
T 3lec_A            6 LQLSKRLQKVANYV--PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLS   83 (230)
T ss_dssp             CCCCHHHHHHHTTS--CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred             HHHHHHHHHHHHHC--CCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCC
T ss_conf             05999999999658--9989999952864999999998399987999309999999999999983998757999887541


Q ss_pred             HHHHHHHCCC-CEEEEECCCHH
Q ss_conf             9876531233-24786225207
Q gi|255764511|r   95 LQDYVPDKGV-DGVVFDLGVSS  115 (341)
Q Consensus        95 i~~~l~~~~v-dgIl~DLGvSS  115 (341)
                        ...+...+ +.+++..|...
T Consensus        84 --~~~~~e~~d~iiiag~g~~~  103 (230)
T 3lec_A           84 --AFEEADNIDTITICGMGGRL  103 (230)
T ss_dssp             --GCCGGGCCCEEEEEEECHHH
T ss_pred             --CCCCCCCCEEEEECCCCHHH
T ss_conf             --00455541278642875889


No 135
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, coiled coil, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus dsm 4304} SCOP: c.66.1.3
Probab=96.43  E-value=0.019  Score=35.14  Aligned_cols=79  Identities=14%  Similarity=0.075  Sum_probs=56.8

Q ss_pred             HCCCCCCEEEECCCCCCHHHHHHHHH--CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH-CCCCEEE
Q ss_conf             08388888998376882889999974--89099980998999999998521488527711327889876531-2332478
Q gi|255764511|r   32 LNPAPGKVILDATFGAGGYSRSFCKM--GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPD-KGVDGVV  108 (341)
Q Consensus        32 l~~~~~g~~iD~TlG~GGHS~~iL~~--~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~-~~vdgIl  108 (341)
                      +.++||..++|.-.|.|.-+..+.+.  .++|+|+|..|.++..+.++.+.. .+...+.........+-.. ..+|.++
T Consensus        53 l~ikpg~~VLDlG~GtG~~~~~la~~~~~g~V~avD~s~~~i~~a~~~a~~~-~n~~~i~~~~~~~~~~~~~~~~v~~i~  131 (210)
T 1nt2_A           53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIVEKVDLIY  131 (210)
T ss_dssp             CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTCCCEEEEE
T ss_pred             CCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHC-CCEEEEEECCCCCCCCCCCCCEEEEEE
T ss_conf             6889989999956888888999997436985999969999999999778648-970799940567411224332135887


Q ss_pred             EEC
Q ss_conf             622
Q gi|255764511|r  109 FDL  111 (341)
Q Consensus       109 ~DL  111 (341)
                      .|+
T Consensus       132 ~~~  134 (210)
T 1nt2_A          132 QDI  134 (210)
T ss_dssp             ECC
T ss_pred             EEC
T ss_conf             202


No 136
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, protein structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides 2}
Probab=96.43  E-value=0.018  Score=35.18  Aligned_cols=83  Identities=16%  Similarity=0.054  Sum_probs=63.4

Q ss_pred             HHHHHHC-CCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCC
Q ss_conf             6886608-388888998376882889999974890999809989999999985214885277113278898765312332
Q gi|255764511|r   27 KVIALLN-PAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVD  105 (341)
Q Consensus        27 Evl~~l~-~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vd  105 (341)
                      +...+|. +.||..++|.=.|.|..+..+...+.+|+|+|..++++..|++++...+..+.+....-..+..  ....+|
T Consensus        35 ~~~~~l~~~~pg~~vLdvGcG~G~~~~~l~~~g~~v~g~D~S~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~fD  112 (261)
T 3iv6_A           35 ENDIFLENIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKE--LAGHFD  112 (261)
T ss_dssp             HHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGG--GTTCCS
T ss_pred             HHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEECCHHHCCC--CCCCCC
T ss_conf             999997179999979998897888999999679989997778999999999746405653302122532334--578846


Q ss_pred             EEEEEC
Q ss_conf             478622
Q gi|255764511|r  106 GVVFDL  111 (341)
Q Consensus       106 gIl~DL  111 (341)
                      .|+...
T Consensus       113 ~Vv~~~  118 (261)
T 3iv6_A          113 FVLNDR  118 (261)
T ss_dssp             EEEEES
T ss_pred             EEEECC
T ss_conf             899813


No 137
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=96.42  E-value=0.0076  Score=37.65  Aligned_cols=79  Identities=18%  Similarity=0.222  Sum_probs=59.9

Q ss_pred             CCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECC
Q ss_conf             83888889983768828899999748909998099899999999852148852771132788987653123324786225
Q gi|255764511|r   33 NPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLG  112 (341)
Q Consensus        33 ~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLG  112 (341)
                      ...+++.++|.=.|.|-++..+...+.+|+|+|..+.++..|++.   ..+++.+.++++.++.   ....+|.|+... 
T Consensus        43 ~~~~~~~vLDvGcG~G~~~~~la~~g~~v~gvD~S~~~l~~a~~~---~~~~v~~~~~d~~~~~---~~~~fD~V~~~~-  115 (218)
T 3ou2_A           43 AGNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGRH---GLDNVEFRQQDLFDWT---PDRQWDAVFFAH-  115 (218)
T ss_dssp             TTTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGGG---CCTTEEEEECCTTSCC---CSSCEEEEEEES-
T ss_pred             CCCCCCCEEEECCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHH---HCCCEEECCCHHHCCC---CCCCCEEEEEEE-
T ss_conf             668899799988988789999996199899997831789999973---0551110011010125---688732899721-


Q ss_pred             CHHHHHH
Q ss_conf             2078887
Q gi|255764511|r  113 VSSMQID  119 (341)
Q Consensus       113 vSS~Qld  119 (341)
                       +.+++.
T Consensus       116 -~l~h~~  121 (218)
T 3ou2_A          116 -WLAHVP  121 (218)
T ss_dssp             -CGGGSC
T ss_pred             -EHHHCC
T ss_conf             -266489


No 138
>2f8l_A Hypothetical protein LMO1582; 16411011, structural genomics, PSI, protein structure initiative, joint center for structural genomics; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.37  E-value=0.013  Score=36.13  Aligned_cols=87  Identities=17%  Similarity=0.218  Sum_probs=59.5

Q ss_pred             HHHHHH-HHHCCCCCCEEEECCCCCCHHHHHHHHH----C---CEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHH
Q ss_conf             098688-6608388888998376882889999974----8---9099980998999999998521488527711327889
Q gi|255764511|r   24 LLEKVI-ALLNPAPGKVILDATFGAGGYSRSFCKM----G---SNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQL   95 (341)
Q Consensus        24 ll~Evl-~~l~~~~~g~~iD~TlG~GGHS~~iL~~----~---~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i   95 (341)
                      ++-+.+ .++.++++..++|.+.|.|+=..++++.    .   .+++|+|.|+.++..|+..+.-.+..+.++++++-. 
T Consensus       117 ~m~~l~~~~~~~~~~~~vlDp~cGsG~~l~~~~~~l~~~~~~~~~~~g~di~~~~~~~a~~n~~~~~~~~~~~~~d~~~-  195 (344)
T 2f8l_A          117 IVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLA-  195 (344)
T ss_dssp             HHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTS-
T ss_pred             HHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCCCCHHHHHCCCCCC-
T ss_conf             9999999983789998899548996689999999987536776189999899999999996400022212331001100-


Q ss_pred             HHHHHHCCCCEEEEECCC
Q ss_conf             876531233247862252
Q gi|255764511|r   96 QDYVPDKGVDGVVFDLGV  113 (341)
Q Consensus        96 ~~~l~~~~vdgIl~DLGv  113 (341)
                        ......+|.|+.+-=+
T Consensus       196 --~~~~~~fD~iv~NPP~  211 (344)
T 2f8l_A          196 --NLLVDPVDVVISDLPV  211 (344)
T ss_dssp             --CCCCCCEEEEEEECCC
T ss_pred             --CCCCCCCCCCCCCCCC
T ss_conf             --1346776721157996


No 139
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=96.35  E-value=0.0061  Score=38.25  Aligned_cols=72  Identities=22%  Similarity=0.235  Sum_probs=56.3

Q ss_pred             CCCCCEEEECCCCCCHHHHHHHHHC-CEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEE
Q ss_conf             3888889983768828899999748-90999809989999999985214885277113278898765312332478
Q gi|255764511|r   34 PAPGKVILDATFGAGGYSRSFCKMG-SNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVV  108 (341)
Q Consensus        34 ~~~~g~~iD~TlG~GGHS~~iL~~~-~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl  108 (341)
                      ..+++.++|.=.|.|..+..+.+.+ .+|+|+|.++.++..++++..+. .++.+.+.++.++.  .+...+|.|+
T Consensus        40 l~~~~~iLDiGCG~G~~~~~L~~~g~~~v~giD~s~~~i~~~~~~~~~~-~~~~~~~~D~~~l~--~~~~sFD~Vi  112 (215)
T 2pxx_A           40 LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV-PQLRWETMDVRKLD--FPSASFDVVL  112 (215)
T ss_dssp             CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC-TTCEEEECCTTSCC--SCSSCEEEEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCC-CEEEEECCCCCCCC--CCCCCEEEEE
T ss_conf             8999989996377779999999848983999827625667999983478-63543214544577--8999778999


No 140
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=96.33  E-value=0.01  Score=36.73  Aligned_cols=84  Identities=21%  Similarity=0.341  Sum_probs=60.7

Q ss_pred             CCCCHHHHHHHHH---CCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH
Q ss_conf             3340098688660---83888889983768828899999748--909998099899999999852148852771132788
Q gi|255764511|r   20 HVPVLLEKVIALL---NPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ   94 (341)
Q Consensus        20 H~PVll~Evl~~l---~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~   94 (341)
                      |.-.+.+.+.+.+   .+.+++.++|.--|.|.++..+.+..  ..++|+|..+.++..|+++.    .++.+..++..+
T Consensus        66 ~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~~gvD~s~~~l~~a~~~~----~~~~~~~~d~~~  141 (269)
T 1p91_A           66 HYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----PQVTFCVASSHR  141 (269)
T ss_dssp             TTHHHHHHHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----TTSEEEECCTTS
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCC----CCCCCEECCHHH
T ss_conf             6389999999999854788899699968989699999998689968999979588999998517----754300023421


Q ss_pred             HHHHHHHCCCCEEEE
Q ss_conf             987653123324786
Q gi|255764511|r   95 LQDYVPDKGVDGVVF  109 (341)
Q Consensus        95 i~~~l~~~~vdgIl~  109 (341)
                      +.  +....+|.|+.
T Consensus       142 lp--~~d~sfD~v~~  154 (269)
T 1p91_A          142 LP--FSDTSMDAIIR  154 (269)
T ss_dssp             CS--BCTTCEEEEEE
T ss_pred             CC--CCCCCEEEEEC
T ss_conf             67--89985778742


No 141
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=96.28  E-value=0.023  Score=34.52  Aligned_cols=88  Identities=11%  Similarity=0.003  Sum_probs=59.8

Q ss_pred             HHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEE
Q ss_conf             60838888899837688288999997489099980998999999998521488527711327889876531233247862
Q gi|255764511|r   31 LLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFD  110 (341)
Q Consensus        31 ~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~D  110 (341)
                      .+...+++.++|.=.|.|..+..+ ..+.+|+|+|.++.++..|++++...+-.+.+.+....   .......+|.|+.-
T Consensus       100 ~~~~~~~~~VLDlGCG~G~l~~~~-~~~~~v~gvD~s~~~l~~ar~~~~~~~~~~~~~~~d~~---~~~~~~~~D~v~~~  175 (253)
T 3frh_A          100 IFSAETPRRVLDIACGLNPLALYE-RGIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVL---CAPPAEAGDLALIF  175 (253)
T ss_dssp             HTSSCCCSEEEEETCTTTHHHHHH-TTCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTT---TSCCCCBCSEEEEE
T ss_pred             HHCCCCCCEEEEECCCCCHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCHH---HCCCCCCCCHHHHH
T ss_conf             845899985999678888999997-68983899979799999999999982997048855622---24577674410542


Q ss_pred             CCCHHHHHHHHHHC
Q ss_conf             25207888765407
Q gi|255764511|r  111 LGVSSMQIDCGDRG  124 (341)
Q Consensus       111 LGvSS~Qld~~~RG  124 (341)
                       + .-+++++++++
T Consensus       176 -~-vl~~l~~~~~~  187 (253)
T 3frh_A          176 -K-LLPLLEREQAG  187 (253)
T ss_dssp             -S-CHHHHHHHSTT
T ss_pred             -C-HHHHCCHHHHH
T ss_conf             -4-48648987899


No 142
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S- adenosylmethionine-dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=96.26  E-value=0.019  Score=35.04  Aligned_cols=75  Identities=19%  Similarity=0.320  Sum_probs=59.3

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHCC--EEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHHHCCCCEEEEE
Q ss_conf             888899837688288999997489--09998099899999999852148-8527711327889876531233247862
Q gi|255764511|r   36 PGKVILDATFGAGGYSRSFCKMGS--NVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVPDKGVDGVVFD  110 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS~~iL~~~~--~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~~~~vdgIl~D  110 (341)
                      .+-+++|--.|.|.++.++-+.++  +++|+|..+.++..|.++..+.+ .++.+++++..++.+.++...+|.|...
T Consensus        41 ~~p~iLEIGcG~G~~~~~lA~~~P~~~~igiD~~~~~v~~a~~~~~~~~l~Nv~~~~~da~~l~~~~~~~~~d~v~~~  118 (214)
T 1yzh_A           41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLN  118 (214)
T ss_dssp             CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred             CCCCEEEEEEECCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCEEEEEECC
T ss_conf             997189994108699999999789997797407788899999999983998644552369887421257743111124


No 143
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=96.22  E-value=0.074  Score=31.27  Aligned_cols=102  Identities=17%  Similarity=0.076  Sum_probs=67.4

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC--EEEEECCCHHHHHHHHHHHHHCC--CCEEEECCCHHHHHHHH
Q ss_conf             098688660838888899837688288999997489--09998099899999999852148--85277113278898765
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGS--NVIALDRDPFAVSCGQETMRDYK--EQFSLFQATFSQLQDYV   99 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~--~liaiDrD~~ai~~a~~~l~~~~--~r~~~~~~~F~~i~~~l   99 (341)
                      -|..+.+++  .+|..++|.=.|.|--+..+++.+.  +|+|+|.++.++..|+++++.++  +++.+++++..+..  .
T Consensus        11 RL~~ia~~v--~~g~~vlDiGcg~G~l~~~l~~~~~~~~V~avDi~~~~l~~A~~n~~~~gl~~~I~~~~~D~~~~~--~   86 (244)
T 3gnl_A           11 RLEKVASYI--TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVI--E   86 (244)
T ss_dssp             HHHHHHTTC--CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC--C
T ss_pred             HHHHHHHHC--CCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHH--C
T ss_conf             999999658--999989997186489999999809998899963889999999999998299986799988750432--1


Q ss_pred             HHCCCCE-EEEECCCHHHHHHHHHHCCCCCCC
Q ss_conf             3123324-786225207888765407344566
Q gi|255764511|r  100 PDKGVDG-VVFDLGVSSMQIDCGDRGFSFQKS  130 (341)
Q Consensus       100 ~~~~vdg-Il~DLGvSS~Qld~~~RGFSf~~d  130 (341)
                      ....+|. +++-.|...+ .+--+.+......
T Consensus        87 ~~~~~d~~viag~g~~~i-~~il~~~~~~l~~  117 (244)
T 3gnl_A           87 KKDAIDTIVIAGMGGTLI-RTILEEGAAKLAG  117 (244)
T ss_dssp             GGGCCCEEEEEEECHHHH-HHHHHHTGGGGTT
T ss_pred             CCCCCCEEEECCCCHHHH-HHHHHHHHHHHCC
T ss_conf             557876899848888999-9999998997077


No 144
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.20  E-value=0.014  Score=35.91  Aligned_cols=27  Identities=19%  Similarity=0.397  Sum_probs=12.4

Q ss_pred             CCHHHHHHHHHCCCCCC----EEEECCCCCC
Q ss_conf             40098688660838888----8998376882
Q gi|255764511|r   22 PVLLEKVIALLNPAPGK----VILDATFGAG   48 (341)
Q Consensus        22 PVll~Evl~~l~~~~~g----~~iD~TlG~G   48 (341)
                      -+...++++.|...+++    +|+|=-++.|
T Consensus        16 ~l~~GD~l~~l~~L~~~sVdlIytDPPYn~~   46 (323)
T 1boo_A           16 SMYIGDSLELLESFPEESISLVMTSPPFALQ   46 (323)
T ss_dssp             EEEESCHHHHGGGSCSSCEEEEEECCCCSSS
T ss_pred             EEEECCHHHHHHHCCCCCCCEEEECCCCCCC
T ss_conf             6996628999862704897989989998577


No 145
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=96.20  E-value=0.025  Score=34.33  Aligned_cols=60  Identities=12%  Similarity=0.098  Sum_probs=51.1

Q ss_pred             CCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             340098688660838888899837688288999997489099980998999999998521
Q gi|255764511|r   21 VPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRD   80 (341)
Q Consensus        21 ~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~   80 (341)
                      -|.|.+-.-+.+...+++.++|-=.|.|=++..+.+++-+|+|+|.-+.|+..+.+....
T Consensus        53 ~p~L~~~~~~~~~~~~~~rvL~pgCG~G~da~~LA~~G~~V~gvD~S~~Ai~~a~~~~~~  112 (252)
T 2gb4_A           53 HQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNL  112 (252)
T ss_dssp             CHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCC
T ss_conf             989999999860889999899989878088999984898489981629999999987545


No 146
>1qyr_A KSGA, high level kasugamycin resistance protein, S-; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24
Probab=96.20  E-value=0.011  Score=36.73  Aligned_cols=75  Identities=9%  Similarity=0.164  Sum_probs=64.9

Q ss_pred             CCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHH
Q ss_conf             3400986886608388888998376882889999974890999809989999999985214885277113278898
Q gi|255764511|r   21 VPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQ   96 (341)
Q Consensus        21 ~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~   96 (341)
                      .+-.++++++.+.+.++..++..--|-|.=|.++|+.+.+|+|++.|+..+...++++... +++.++++.+-+++
T Consensus         6 d~~i~~~iv~~~~~~~~d~vlEIGpG~G~LT~~Ll~~~~~v~avE~D~~l~~~L~~~~~~~-~~~~ii~~D~l~~~   80 (252)
T 1qyr_A            6 DQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLG-PKLTIYQQDAMTFN   80 (252)
T ss_dssp             CHHHHHHHHHHHCCCTTCCEEEECCTTTTTHHHHHTTCSCEEEECCCHHHHHHHHTCTTTG-GGEEEECSCGGGCC
T ss_pred             CHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCC-CCEEEEECHHHHHC
T ss_conf             8899999998448999796999899872999999816897699996212889999876317-76256501145523


No 147
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=96.19  E-value=0.0039  Score=39.53  Aligned_cols=52  Identities=17%  Similarity=0.273  Sum_probs=43.4

Q ss_pred             HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHH
Q ss_conf             6886608388888998376882889999974890999809989999999985
Q gi|255764511|r   27 KVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETM   78 (341)
Q Consensus        27 Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l   78 (341)
                      +.+..+...+.+.++|.-.|.|..+..+++.+++|+|+|.++.++..+++++
T Consensus         8 ~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~i~~a~~~~   59 (170)
T 3i9f_A            8 EYLPNIFEGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKF   59 (170)
T ss_dssp             TTHHHHHSSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHC
T ss_pred             HHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCEECCCC
T ss_conf             9998755789697999808997999999962998999945642010001221


No 148
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=96.17  E-value=0.01  Score=36.83  Aligned_cols=80  Identities=20%  Similarity=0.255  Sum_probs=52.2

Q ss_pred             HHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC--EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCC
Q ss_conf             88660838888899837688288999997489--0999809989999999985214885277113278898765312332
Q gi|255764511|r   28 VIALLNPAPGKVILDATFGAGGYSRSFCKMGS--NVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVD  105 (341)
Q Consensus        28 vl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~--~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vd  105 (341)
                      .++.|.+.+++.++|-=.|.|.-+..+++.++  +|+++|.++.|+..|+++++..+-...++.++-   ...+ +..+|
T Consensus       188 Ll~~l~~~~~~~VLDlGcG~G~l~~~la~~~p~~~v~~vD~s~~al~~ar~n~~~n~l~~~~~~~d~---~~~~-~~~fD  263 (343)
T 2pjd_A          188 LLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNV---FSEV-KGRFD  263 (343)
T ss_dssp             HHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECST---TTTC-CSCEE
T ss_pred             HHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCC---HHCC-CCCCC
T ss_conf             9985650589829993252779999999978997899998999999999999998499379996440---1226-65545


Q ss_pred             EEEEEC
Q ss_conf             478622
Q gi|255764511|r  106 GVVFDL  111 (341)
Q Consensus       106 gIl~DL  111 (341)
                      .|+.|.
T Consensus       264 ~Iv~Np  269 (343)
T 2pjd_A          264 MIISNP  269 (343)
T ss_dssp             EEEECC
T ss_pred             EEEECC
T ss_conf             899887


No 149
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, S-adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum tls} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=96.13  E-value=0.019  Score=35.10  Aligned_cols=68  Identities=15%  Similarity=0.128  Sum_probs=35.2

Q ss_pred             HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC--EEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHH
Q ss_conf             98688660838888899837688288999997489--0999809989999999985214--885277113278
Q gi|255764511|r   25 LEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGS--NVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFS   93 (341)
Q Consensus        25 l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~--~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~   93 (341)
                      ...+++.+.......++|.--|.|.++.++++.++  +++++|. |+++..++++..+.  .+|+.+..++|-
T Consensus       179 ~~~~~~~~~~~~~~~vlDiG~G~G~~~~~l~~~~p~~~~~~~Dl-p~~~~~a~~~~~~~~l~~rv~~~~gD~~  250 (359)
T 1x19_A          179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIY  250 (359)
T ss_dssp             HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred             HHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHHHHCCCCCCCEEEECCHH
T ss_conf             99999847876787799767989799999998399228998166-8889999986675077634527834577


No 150
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=96.10  E-value=0.045  Score=32.65  Aligned_cols=81  Identities=20%  Similarity=0.236  Sum_probs=66.1

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH-CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHHHHHH
Q ss_conf             0986886608388888998376882889999974-890999809989999999985214--8852771132788987653
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM-GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQDYVP  100 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~-~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~~~l~  100 (341)
                      +++.+++-+.+++|..++|-=.|.||=+..+.+. +++|.|++..++-+..++++..+.  .+++.+....+.+++    
T Consensus        52 k~~~l~~~l~l~~G~~VLDiGCG~G~~a~~~A~~~g~~v~git~s~~q~~~a~~~~~~~~~~~~~~~~~~d~~~~~----  127 (287)
T 1kpg_A           52 KIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD----  127 (287)
T ss_dssp             HHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC----
T ss_pred             HHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC----
T ss_conf             9999999719999998999688525999999996798469996899999999999876145401578874366413----


Q ss_pred             HCCCCEEEE
Q ss_conf             123324786
Q gi|255764511|r  101 DKGVDGVVF  109 (341)
Q Consensus       101 ~~~vdgIl~  109 (341)
                       ..+|.|..
T Consensus       128 -~~fD~i~s  135 (287)
T 1kpg_A          128 -EPVDRIVS  135 (287)
T ss_dssp             -CCCSEEEE
T ss_pred             -CCCCCEEE
T ss_conf             -77640555


No 151
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, tRNA processing; HET: SAM; 1.50A {Escherichia coli K12} PDB: 3dxx_A* 3dxz_A*
Probab=96.10  E-value=0.069  Score=31.44  Aligned_cols=75  Identities=15%  Similarity=0.242  Sum_probs=59.1

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHCC--EEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCH-HHHHHHHHHCCCCEEEE
Q ss_conf             8888899837688288999997489--09998099899999999852148-8527711327-88987653123324786
Q gi|255764511|r   35 APGKVILDATFGAGGYSRSFCKMGS--NVIALDRDPFAVSCGQETMRDYK-EQFSLFQATF-SQLQDYVPDKGVDGVVF  109 (341)
Q Consensus        35 ~~~g~~iD~TlG~GGHS~~iL~~~~--~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F-~~i~~~l~~~~vdgIl~  109 (341)
                      .++-+++|.-+|.|.++..+-..++  .++|+|.-+..+..+.++.+..+ .++.+++++. .-+..+++...+|.|..
T Consensus        33 ~~~pliLEIGcG~G~~l~~~A~~~P~~~~iGiEi~~~~v~~a~~~~~~~~l~Ni~~~~~da~~~l~~~~~~~s~d~I~i  111 (218)
T 3dxy_A           33 REAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQL  111 (218)
T ss_dssp             SCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEE
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCEEEEHHHCCHHHHCCCCEECCCHHHHHHHHCCCCCCCCCEE
T ss_conf             9995399972688899999999689998899997235055303212012104550564538999987524564544323


No 152
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=95.98  E-value=0.045  Score=32.64  Aligned_cols=68  Identities=19%  Similarity=0.294  Sum_probs=47.8

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEE
Q ss_conf             888889983768828899999748909998099899999999852148852771132788987653123324786
Q gi|255764511|r   35 APGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVF  109 (341)
Q Consensus        35 ~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~  109 (341)
                      .++..++|.=.|.|..+..+.+.+.+++|+|..+.++..|++++       .....++.....-.++..+|.|++
T Consensus        40 ~~~~~vLDiGCG~G~~~~~l~~~g~~v~GiD~s~~~i~~a~~~~-------~~~~~~~~~~~~~~~~~~fD~V~~  107 (240)
T 3dli_A           40 KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGKF-------NVVKSDAIEYLKSLPDKYLDGVMI  107 (240)
T ss_dssp             TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTTS-------EEECSCHHHHHHTSCTTCBSEEEE
T ss_pred             CCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHC-------CCCHHHHHHHHCCCCCCCCCEEEE
T ss_conf             89996999738785999999977995999967707878876511-------100100666402354347658876


No 153
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=95.93  E-value=0.045  Score=32.65  Aligned_cols=58  Identities=24%  Similarity=0.268  Sum_probs=47.4

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             334009868866083888889983768828899999748909998099899999999852
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMR   79 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~   79 (341)
                      ..+..|.+.+..+  .+++.++|-=.|.|..+..+.+.+.+|+|+|..+.++..|++++.
T Consensus        29 ~~~~~l~~~~~~l--~~~~~VLDvGCG~G~~~~~l~~~g~~v~gvD~s~~~i~~a~~~~~   86 (211)
T 3e23_A           29 PRSATLTKFLGEL--PAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRLG   86 (211)
T ss_dssp             CCCHHHHHHHTTS--CTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHC--CCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHCC
T ss_conf             5669999999618--998989998688869999999759923234146999999998608


No 154
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.92  E-value=0.042  Score=32.87  Aligned_cols=15  Identities=13%  Similarity=0.164  Sum_probs=6.0

Q ss_pred             HHHHHHHHHCCCCCC
Q ss_conf             098688660838888
Q gi|255764511|r   24 LLEKVIALLNPAPGK   38 (341)
Q Consensus        24 ll~Evl~~l~~~~~g   38 (341)
                      +...+++.|...+++
T Consensus        25 ~~GD~le~lk~L~d~   39 (297)
T 2zig_A           25 HVGDAREVLASFPEA   39 (297)
T ss_dssp             EESCHHHHHTTSCTT
T ss_pred             EECCHHHHHHHCCCC
T ss_conf             947689999628677


No 155
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A*
Probab=95.88  E-value=0.019  Score=35.10  Aligned_cols=92  Identities=10%  Similarity=-0.035  Sum_probs=67.1

Q ss_pred             HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC--EEEEECCCHHHHHHHHHHHHHC-----CCCEEEECCCHHHHHHHH
Q ss_conf             688660838888899837688288999997489--0999809989999999985214-----885277113278898765
Q gi|255764511|r   27 KVIALLNPAPGKVILDATFGAGGYSRSFCKMGS--NVIALDRDPFAVSCGQETMRDY-----KEQFSLFQATFSQLQDYV   99 (341)
Q Consensus        27 Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~--~liaiDrD~~ai~~a~~~l~~~-----~~r~~~~~~~F~~i~~~l   99 (341)
                      +-+.-+.++++.+++|.=.|.|..+..+.+.++  +|+|+|.+++++..+..+....     ..++.+..++..++....
T Consensus        15 ~~l~~~~~~~~~~vLDvGcG~G~~~~~la~~~p~~~vvGvD~s~~~l~~a~~~~~~~~~~~~~~~v~~~~~d~~~lp~~~   94 (225)
T 3p2e_A           15 DELTEIIGQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFEL   94 (225)
T ss_dssp             HHHHHHHTTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGG
T ss_pred             HHHHHHHCCCCCEEEEEEEECCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHCCCCC
T ss_conf             99998648899989992276739999999868997899986788999999988887544037864333205174498430


Q ss_pred             HHCCCCEEEEECCCHHHHHH
Q ss_conf             31233247862252078887
Q gi|255764511|r  100 PDKGVDGVVFDLGVSSMQID  119 (341)
Q Consensus       100 ~~~~vdgIl~DLGvSS~Qld  119 (341)
                      . ...+.+-+|+-.+...+.
T Consensus        95 ~-~~~~~~~~~~~~~~~~~~  113 (225)
T 3p2e_A           95 K-NIADSISILFPWGTLLEY  113 (225)
T ss_dssp             T-TCEEEEEEESCCHHHHHH
T ss_pred             C-CCCCEEEEEECHHHHHHH
T ss_conf             4-775349997400355675


No 156
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA; HET: SAH; 2.60A {Thermus thermophilus HB8}
Probab=95.86  E-value=0.0054  Score=38.59  Aligned_cols=82  Identities=16%  Similarity=0.229  Sum_probs=58.5

Q ss_pred             CCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             38888899837688288999997489099980998999999998521488527711327889876531233247862252
Q gi|255764511|r   34 PAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGV  113 (341)
Q Consensus        34 ~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGv  113 (341)
                      ..+|..++|.=.|.|..+..+  ...+|+|+|..+.++..|+++.    .++.+.+.+..++.  ++...+|.|+.-.  
T Consensus        34 l~~g~~iLDiGCG~G~~~~~l--~~~~v~g~D~s~~~l~~A~~~~----~~~~~~~~~~~~l~--~~~~~fD~V~~~~--  103 (211)
T 2gs9_A           34 LPPGESLLEVGAGTGYWLRRL--PYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEALP--FPGESFDVVLLFT--  103 (211)
T ss_dssp             CCCCSEEEEETCTTCHHHHHC--CCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSCC--SCSSCEEEEEEES--
T ss_pred             CCCCCEEEEECCCCHHHHHHC--CCCCEEEEECCHHHHHHHHHCC----CCCEEEECCHHCCC--CCCCCCCHHHHHH--
T ss_conf             799998999899860999973--7686899838999999876336----65203434231178--8756422798754--


Q ss_pred             HHHHHHHHHHCC
Q ss_conf             078887654073
Q gi|255764511|r  114 SSMQIDCGDRGF  125 (341)
Q Consensus       114 SS~Qld~~~RGF  125 (341)
                      +.+++.++++.+
T Consensus       104 ~l~h~~d~~~~l  115 (211)
T 2gs9_A          104 TLEFVEDVERVL  115 (211)
T ss_dssp             CTTTCSCHHHHH
T ss_pred             HHHHCCCHHHHH
T ss_conf             787248999999


No 157
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=95.75  E-value=0.0013  Score=42.68  Aligned_cols=97  Identities=19%  Similarity=0.297  Sum_probs=76.1

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH
Q ss_conf             33400986886608388888998376882889999974890999809989999999985214885277113278898765
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYV   99 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l   99 (341)
                      +.|..++.+++.+.+.++..+++.--|.|.=|..+++.+.+|+|++.|+.....+++++..+ .++.++++.+-+++  +
T Consensus        13 ~d~~i~~~Iv~~~~~~~~d~VlEIGpG~G~LT~~L~~~~~~v~aiE~D~~l~~~l~~~~~~~-~n~~ii~~D~l~~~--~   89 (245)
T 1yub_A           13 TSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLN-TRVTLIHQDILQFQ--F   89 (245)
T ss_dssp             CCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTTC-SEEEECCSCCTTTT--C
T ss_pred             CCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCC-CCCHHHHCCHHCCC--C
T ss_conf             89899999999458999996899799735999999961650040340446689887554113-40002201100014--4


Q ss_pred             HHCCCCEEEEECC--CHHHHHH
Q ss_conf             3123324786225--2078887
Q gi|255764511|r  100 PDKGVDGVVFDLG--VSSMQID  119 (341)
Q Consensus       100 ~~~~vdgIl~DLG--vSS~Qld  119 (341)
                      +.....-|+.+|=  +||.=+.
T Consensus        90 ~~~~~~~vv~NLPY~Iss~il~  111 (245)
T 1yub_A           90 PNKQRYKIVGNIPYHLSTQIIK  111 (245)
T ss_dssp             CCSSEEEEEEECCSSSCHHHHH
T ss_pred             CCCCCEEEEECCCHHHHHHHHH
T ss_conf             4578656871675787648999


No 158
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, DNA binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.75  E-value=0.036  Score=33.29  Aligned_cols=46  Identities=28%  Similarity=0.335  Sum_probs=21.5

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             8888899837688288999997489099980998999999998521
Q gi|255764511|r   35 APGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRD   80 (341)
Q Consensus        35 ~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~   80 (341)
                      .+|++++|...|.|--..|-.+.+-+.||+|.|++....|.+|++.
T Consensus       241 ~~gdiVLDpF~GSGTT~~AA~~lgR~~IG~Ei~~~y~~ia~~Ri~~  286 (319)
T 1eg2_A          241 HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTF  286 (319)
T ss_dssp             CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
T ss_conf             8999999879988489999998199399994899999999999997


No 159
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=95.61  E-value=0.047  Score=32.54  Aligned_cols=79  Identities=22%  Similarity=0.368  Sum_probs=55.3

Q ss_pred             HCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHH----C-CCCEEEECCC-HHHHHHHHHHCC
Q ss_conf             083888889983768828899999748--9099980998999999998521----4-8852771132-788987653123
Q gi|255764511|r   32 LNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRD----Y-KEQFSLFQAT-FSQLQDYVPDKG  103 (341)
Q Consensus        32 l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~----~-~~r~~~~~~~-F~~i~~~l~~~~  103 (341)
                      ..+.|..+.| .=.|.||=.+.+|+..  .++..+|.|++.+..|++-+..    + ..|+.++.+. +.-+.+ ..+..
T Consensus       117 ~h~~PkrVLI-IGgGdG~~~revlk~~~v~~v~~VEID~~Vi~~a~~~fp~~~~~~~dprv~iii~Dg~~~l~~-~~~~~  194 (334)
T 1xj5_A          117 SIPNPKKVLV-IGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKN-AAEGS  194 (334)
T ss_dssp             TSSCCCEEEE-ETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHT-SCTTC
T ss_pred             CCCCCCEEEE-ECCCCHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHH-CCCCC
T ss_conf             1999886999-889948999999974996533575058999999997534430235799879998627999751-53356


Q ss_pred             CCEEEEECC
Q ss_conf             324786225
Q gi|255764511|r  104 VDGVVFDLG  112 (341)
Q Consensus       104 vdgIl~DLG  112 (341)
                      +|.|+.|+-
T Consensus       195 yDvIIvD~~  203 (334)
T 1xj5_A          195 YDAVIVDSS  203 (334)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEEECC
T ss_conf             677999789


No 160
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG; HET: MSE; 2.15A {Nostoc punctiforme pcc 73102}
Probab=95.60  E-value=0.035  Score=33.36  Aligned_cols=71  Identities=11%  Similarity=0.176  Sum_probs=40.0

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHCC--EEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHHHHHHHCCCCEEEEE
Q ss_conf             888899837688288999997489--0999809989999999985214--88527711327889876531233247862
Q gi|255764511|r   36 PGKVILDATFGAGGYSRSFCKMGS--NVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQDYVPDKGVDGVVFD  110 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS~~iL~~~~--~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~~~l~~~~vdgIl~D  110 (341)
                      .+..++|.--|.|.++.++++.++  +++++|. |.++..++++....  .+|+.+...+|-+.+   ...++|.|++-
T Consensus       165 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~Dl-p~~~~~a~~~~~~~~l~~rv~~~~~d~~~~~---~~~~~D~v~~~  239 (335)
T 2r3s_A          165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDW-ASVLEVAKENARIQGVASRYHTIAGSAFEVD---YGNDYDLVLLP  239 (335)
T ss_dssp             CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHHTCGGGEEEEESCTTTSC---CCSCEEEEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHCCCCCEEEECC-HHHHHHHHHHHHHHCCCEEEEECCCCHHHCC---CCCCHHHHHHH
T ss_conf             898799979996299999998589877377446-7888999987886087435653245332055---43313588863


No 161
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protein structure initiative, midwest center for structural genomics; HET: MSE; 2.05A {Escherichia coli K12} SCOP: c.66.1.46
Probab=95.58  E-value=0.11  Score=30.25  Aligned_cols=90  Identities=10%  Similarity=0.043  Sum_probs=64.5

Q ss_pred             HHHHHH-HHHCC-CCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHC-CCCEEEECCCHHHHHHHH
Q ss_conf             098688-66083-8888899837688288999997489-0999809989999999985214-885277113278898765
Q gi|255764511|r   24 LLEKVI-ALLNP-APGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDY-KEQFSLFQATFSQLQDYV   99 (341)
Q Consensus        24 ll~Evl-~~l~~-~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~-~~r~~~~~~~F~~i~~~l   99 (341)
                      .+.|.| +.|.. ..+..++|.=-|.|.-+..-|.++. +|+.+|.|+.|+...++.++.. .+++.++.++--..... 
T Consensus        40 rvrealFn~L~~~~~~~~vLDLfaGsG~lgiEalsRGa~~v~fVE~~~~a~~~l~~N~~~~~~~~~~ii~~d~~~~l~~-  118 (202)
T 2fpo_A           40 RVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQ-  118 (202)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSS-
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHH-
T ss_conf             9999999986643289869988878558899987079988689997033356788789874635535995324565541-


Q ss_pred             HHCCCCEEEEECCCH
Q ss_conf             312332478622520
Q gi|255764511|r  100 PDKGVDGVVFDLGVS  114 (341)
Q Consensus       100 ~~~~vdgIl~DLGvS  114 (341)
                      ....+|.|++|==|.
T Consensus       119 ~~~~fDlIflDPPY~  133 (202)
T 2fpo_A          119 KGTPHNIVFVDPPFR  133 (202)
T ss_dssp             CCCCEEEEEECCSSS
T ss_pred             CCCCCCEEEECCCCC
T ss_conf             277666899769987


No 162
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 1f3l_A*
Probab=95.52  E-value=0.066  Score=31.58  Aligned_cols=80  Identities=20%  Similarity=0.292  Sum_probs=58.2

Q ss_pred             HCCCCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHH--CCCCEEEECCCHHHHHHHHHHCCCCEEE
Q ss_conf             0838888899837688288999997489-099980998999999998521--4885277113278898765312332478
Q gi|255764511|r   32 LNPAPGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRD--YKEQFSLFQATFSQLQDYVPDKGVDGVV  108 (341)
Q Consensus        32 l~~~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~--~~~r~~~~~~~F~~i~~~l~~~~vdgIl  108 (341)
                      ....++.+++|.--|.|..|....+.+. +|+|+|..+.++..+ +....  ..+++.+++++..++.  +....+|.|+
T Consensus        60 ~~~~~~k~VLDlGcGtG~ls~~aA~~Ga~~V~avd~s~~~~~a~-~~~~~~~~~~~i~~i~~d~~~l~--~~~~~~D~iv  136 (340)
T 2fyt_A           60 PHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAM-DIIRLNKLEDTITLIKGKIEEVH--LPVEKVDVII  136 (340)
T ss_dssp             GGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHH-HHHHHTTCTTTEEEEESCTTTSC--CSCSCEEEEE
T ss_pred             CCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHH-HHHHHHCCCCCEEEEEEEHHHCC--CCCCCCCEEE
T ss_conf             21059698999327747999999975998899980989999999-99997454775168981488764--7646676899


Q ss_pred             EECCCH
Q ss_conf             622520
Q gi|255764511|r  109 FDLGVS  114 (341)
Q Consensus       109 ~DLGvS  114 (341)
                      .+.-.+
T Consensus       137 se~~~~  142 (340)
T 2fyt_A          137 SEWMGY  142 (340)
T ss_dssp             ECCCBT
T ss_pred             EECCCE
T ss_conf             963210


No 163
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in europe; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=95.51  E-value=0.08  Score=31.05  Aligned_cols=28  Identities=32%  Similarity=0.471  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHHCCCCCCEEEEEEECCCH
Q ss_conf             8999999885202445338998725502
Q gi|255764511|r  227 ELAQGLRSAEKALKAGGLLIVVSFHSLE  254 (341)
Q Consensus       227 ~L~~~L~~~~~~L~~gGrl~VISFHSLE  254 (341)
                      +...+|..+.+.|+|||+++|+-+-..+
T Consensus       265 ~~~~iL~~~~~~L~pgG~lli~d~~~~~  292 (374)
T 1qzz_A          265 DALTILRGCVRALEPGGRLLVLDRADVE  292 (374)
T ss_dssp             HHHHHHHHHHHHEEEEEEEEEEECCH--
T ss_pred             HHHHHHHHHHHHCCCCCEEEEEEECCCC
T ss_conf             9999999999862989889999802479


No 164
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17
Probab=95.50  E-value=0.066  Score=31.58  Aligned_cols=95  Identities=21%  Similarity=0.221  Sum_probs=64.5

Q ss_pred             CCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHHC------CCCE
Q ss_conf             116078334009868866083888889983768828899999748--90999809989999999985214------8852
Q gi|255764511|r   14 HHTIGDHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRDY------KEQF   85 (341)
Q Consensus        14 ~~~~~~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~~------~~r~   85 (341)
                      .++..+|.  |+--+--.+.+.| ..++..=+|.||=+..+|+..  .++.++|.||+.+..|++.+...      ..|+
T Consensus        58 ~de~~Yhe--~l~h~~l~~~~~p-k~vLiiG~G~G~~~~~ll~~~~~~~i~~VEiDp~Vi~~a~~~f~~~~~~~~~dprv  134 (314)
T 1uir_A           58 RDEYIYHE--TLVHPAMLTHPEP-KRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRA  134 (314)
T ss_dssp             TTHHHHHH--HHHHHHHHHSSCC-CEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTE
T ss_pred             CCHHHHHH--HHHHHHHHHCCCC-CEEEEECCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCEE
T ss_conf             41778899--9888888609997-87999889837999999865996779874021899999875183013453568706


Q ss_pred             EEECCCHHHHHHHHHHCCCCEEEEECC
Q ss_conf             771132788987653123324786225
Q gi|255764511|r   86 SLFQATFSQLQDYVPDKGVDGVVFDLG  112 (341)
Q Consensus        86 ~~~~~~F~~i~~~l~~~~vdgIl~DLG  112 (341)
                      .++.+.....-+-. ...+|.|+.|+-
T Consensus       135 ~v~~~Da~~~l~~~-~~~yDvIi~D~~  160 (314)
T 1uir_A          135 VLVIDDARAYLERT-EERYDVVIIDLT  160 (314)
T ss_dssp             EEEESCHHHHHHHC-CCCEEEEEEECC
T ss_pred             EEEECHHHHHHHHC-CCCCCEEEECCC
T ss_conf             99972599999748-776788998788


No 165
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=95.44  E-value=0.06  Score=31.82  Aligned_cols=29  Identities=24%  Similarity=0.423  Sum_probs=17.7

Q ss_pred             HHHHHHHHHHHCCCCCCEEEEEEECCCHH
Q ss_conf             89999998852024453389987255023
Q gi|255764511|r  227 ELAQGLRSAEKALKAGGLLIVVSFHSLED  255 (341)
Q Consensus       227 ~L~~~L~~~~~~L~~gGrl~VISFHSLED  255 (341)
                      .....|..+.+.|+|||+++|+.+-.-+|
T Consensus       265 ~~~~~L~~~~~aL~pgG~lli~e~~~~~~  293 (352)
T 3mcz_A          265 EAREVIGHAAGLVKPGGALLILTMTMNDD  293 (352)
T ss_dssp             HHHHHHHHHHHTEEEEEEEEEEEECCCTT
T ss_pred             HHHHHHHHHHHHCCCCCEEEEEEECCCCC
T ss_conf             99999999998629881899998204898


No 166
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, structural genomics; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=95.35  E-value=0.029  Score=33.92  Aligned_cols=87  Identities=16%  Similarity=0.287  Sum_probs=57.2

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH---------------CCEEEEECCCHHHHHHHHHHHHHCC---CCE
Q ss_conf             0986886608388888998376882889999974---------------8909998099899999999852148---852
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM---------------GSNVIALDRDPFAVSCGQETMRDYK---EQF   85 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---------------~~~liaiDrD~~ai~~a~~~l~~~~---~r~   85 (341)
                      +.+-+++.+.|.++..++|-+.|.||-..+..+.               ...++|+|.|+.+...|+-.+.-.+   ...
T Consensus       159 Iv~~mv~ll~~~~~~~IlDPacGsG~fL~~~~~~~~~~~~~~~~~~~~~~~~i~G~e~~~~~~~la~~nl~l~~~~~~~~  238 (445)
T 2okc_A          159 LIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRS  238 (445)
T ss_dssp             HHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCC
T ss_pred             HHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCEECEECCHHHHHHHHHHCCCCCCCCCCC
T ss_conf             99999976079999978127889766599999999873122777755301014234120999999996231027764320


Q ss_pred             EEECCCHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             7711327889876531233247862252
Q gi|255764511|r   86 SLFQATFSQLQDYVPDKGVDGVVFDLGV  113 (341)
Q Consensus        86 ~~~~~~F~~i~~~l~~~~vdgIl~DLGv  113 (341)
                      .+.+..+.+   .-....+|.|+.+-=+
T Consensus       239 ~i~~~d~~~---~~~~~~fD~Ii~NPPf  263 (445)
T 2okc_A          239 PIVCEDSLE---KEPSTLVDVILANPPF  263 (445)
T ss_dssp             SEEECCTTT---SCCSSCEEEEEECCCS
T ss_pred             EEECCCHHH---HCCCCCCCEEECCCCC
T ss_conf             122153032---0243468722458997


No 167
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=95.34  E-value=0.082  Score=30.96  Aligned_cols=77  Identities=9%  Similarity=0.138  Sum_probs=57.4

Q ss_pred             CCCCCEEEECCCCCCHHHHHHHHHCC--EEEEECCCHHHHHHHHHHHHH--------C-CCCEEEECCCHHH-HHHHHHH
Q ss_conf             38888899837688288999997489--099980998999999998521--------4-8852771132788-9876531
Q gi|255764511|r   34 PAPGKVILDATFGAGGYSRSFCKMGS--NVIALDRDPFAVSCGQETMRD--------Y-KEQFSLFQATFSQ-LQDYVPD  101 (341)
Q Consensus        34 ~~~~g~~iD~TlG~GGHS~~iL~~~~--~liaiDrD~~ai~~a~~~l~~--------~-~~r~~~~~~~F~~-i~~~l~~  101 (341)
                      ..+.-+++|.-+|.|+++..+-..++  +++|+|.++.++..+.+++..        . -.++.+++++..+ +.+++..
T Consensus        47 ~~~~p~iLeIGcG~G~~l~~lA~~~p~~~~iGiEi~~~~v~~~~~ri~~~~~~~a~~~~l~Ni~~~~~da~~~l~~~~~~  126 (246)
T 2vdv_E           47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK  126 (246)
T ss_dssp             BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCC
T ss_conf             68998799982689989999998689875898850368999999999999874787749871999937348888875146


Q ss_pred             CCCCEEEEE
Q ss_conf             233247862
Q gi|255764511|r  102 KGVDGVVFD  110 (341)
Q Consensus       102 ~~vdgIl~D  110 (341)
                      ..+|.|.+.
T Consensus       127 ~s~d~v~i~  135 (246)
T 2vdv_E          127 GQLSKMFFC  135 (246)
T ss_dssp             TCEEEEEEE
T ss_pred             CCCCEEEEE
T ss_conf             776734898


No 168
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=95.30  E-value=0.052  Score=32.25  Aligned_cols=95  Identities=15%  Similarity=0.200  Sum_probs=72.8

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHC-CCCEEEECCCHHHHHHH
Q ss_conf             33400986886608388888998376882889999974890999809989999999985214-88527711327889876
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDY-KEQFSLFQATFSQLQDY   98 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~-~~r~~~~~~~F~~i~~~   98 (341)
                      +.|-.++.+++.+.+.++..+++.--|.|.=|.++|+.+.+|+|++.|+..+...++.+... ..++.++++.+....  
T Consensus        26 ~D~~i~~kIv~~~~~~~~d~VLEIGPG~G~LT~~Ll~~~~~v~aiE~D~~l~~~L~e~~~~~~~~~~~~i~~D~~~~~--  103 (299)
T 2h1r_A           26 KNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV--  103 (299)
T ss_dssp             CCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC--
T ss_pred             CCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH--
T ss_conf             898999999984589998989996897279999998239907999777089999997543213333332034420000--


Q ss_pred             HHHCCCCEEEEECCCH-HHHH
Q ss_conf             5312332478622520-7888
Q gi|255764511|r   99 VPDKGVDGVVFDLGVS-SMQI  118 (341)
Q Consensus        99 l~~~~vdgIl~DLGvS-S~Ql  118 (341)
                        ..+..-|+.+|=|+ |.++
T Consensus       104 --~~~~~~vVgNLPY~ISs~i  122 (299)
T 2h1r_A          104 --FPKFDVCTANIPYKISSPL  122 (299)
T ss_dssp             --CCCCSEEEEECCGGGHHHH
T ss_pred             --CCCCCEEECCCCHHHHHHH
T ss_conf             --2454346147884789999


No 169
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=95.28  E-value=0.16  Score=29.18  Aligned_cols=56  Identities=30%  Similarity=0.429  Sum_probs=45.2

Q ss_pred             CCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             40098688660838888899837688288999997489099980998999999998521
Q gi|255764511|r   22 PVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRD   80 (341)
Q Consensus        22 PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~   80 (341)
                      ..|++++++.   .++..++|.=-|-|--|..+.+...+|+|+|.++.|+..|++..+.
T Consensus       279 ~~L~~~v~~~---~~~~~vlDLycG~G~fsl~LA~~~~~V~gvE~~~~av~~A~~na~~  334 (425)
T 2jjq_A          279 VNLVRKVSEL---VEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEI  334 (425)
T ss_dssp             HHHHHHHHHH---CCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCC---CCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
T ss_conf             5421222203---6877787626786688899874285545750468889999998987


No 170
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5- methylpyrimidin-2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=95.15  E-value=0.013  Score=36.18  Aligned_cols=82  Identities=16%  Similarity=0.245  Sum_probs=59.8

Q ss_pred             CHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH
Q ss_conf             00986886608388888998376882889999974---890999809989999999985214885277113278898765
Q gi|255764511|r   23 VLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYV   99 (341)
Q Consensus        23 Vll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l   99 (341)
                      -+.+-+++.+.+.++..++|-+.|.|+=-.++++.   ..+++|+|.|+.|+..|+        ...+++++|-..+   
T Consensus        26 ~i~~~~~~~l~~~~~~~IlDPacGsG~FL~~~~~~~~~~~~i~G~did~~~~~la~--------~~~i~~~D~l~~~---   94 (421)
T 2ih2_A           26 EVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPP--------WAEGILADFLLWE---   94 (421)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCCT--------TEEEEESCGGGCC---
T ss_pred             HHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHH--------HHHHHHCCCCCCC---
T ss_conf             99999999478999699996877646999999986776786999979899999999--------7427737733368---


Q ss_pred             HHCCCCEEEEECCCHH
Q ss_conf             3123324786225207
Q gi|255764511|r  100 PDKGVDGVVFDLGVSS  115 (341)
Q Consensus       100 ~~~~vdgIl~DLGvSS  115 (341)
                      ...++|.|+.+=-+..
T Consensus        95 ~~~~fD~VigNPPy~~  110 (421)
T 2ih2_A           95 PGEAFDLILGNPPYGI  110 (421)
T ss_dssp             CSSCEEEEEECCCCCC
T ss_pred             CCCCCCEEEECCCCCC
T ss_conf             5457777872576554


No 171
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=95.14  E-value=0.082  Score=30.98  Aligned_cols=90  Identities=12%  Similarity=0.111  Sum_probs=60.4

Q ss_pred             HHHHHHHHHCCC--CCCEEEECCCCCCHHHHHHHHH--CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCH-HHHH
Q ss_conf             098688660838--8888998376882889999974--890999809989999999985214--88527711327-8898
Q gi|255764511|r   24 LLEKVIALLNPA--PGKVILDATFGAGGYSRSFCKM--GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATF-SQLQ   96 (341)
Q Consensus        24 ll~Evl~~l~~~--~~g~~iD~TlG~GGHS~~iL~~--~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F-~~i~   96 (341)
                      ++.++|......  +....+|.=.|.|.=+-.+...  +.+++|+|.|++|++.|++..+..  .+++.+++... ..+.
T Consensus        51 ~i~dlL~~~~~~~~~~~~~lDiGtGsg~I~~~L~~~~~~~~~~~~Di~~~al~~A~~N~~~n~l~~~i~~~~~~~~~~i~  130 (254)
T 2h00_A           51 WVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLM  130 (254)
T ss_dssp             HHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSST
T ss_pred             HHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH
T ss_conf             99999705466667775489956787899999999779975999989999999999999983876522456523277676


Q ss_pred             HHH---HHCCCCEEEEECCC
Q ss_conf             765---31233247862252
Q gi|255764511|r   97 DYV---PDKGVDGVVFDLGV  113 (341)
Q Consensus        97 ~~l---~~~~vdgIl~DLGv  113 (341)
                      +.+   ....+|.|+.+-=|
T Consensus       131 ~~~~~~~~~~fD~iv~NPPY  150 (254)
T 2h00_A          131 DALKEESEIIYDFCMCNPPF  150 (254)
T ss_dssp             TTSTTCCSCCBSEEEECCCC
T ss_pred             HHHHHHCCCCEEEEEECCCC
T ss_conf             66666436765499936855


No 172
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=95.03  E-value=0.094  Score=30.57  Aligned_cols=30  Identities=20%  Similarity=0.388  Sum_probs=23.4

Q ss_pred             HHHHHHHHHHHCCCCCCEEEEEEECCCHHH
Q ss_conf             899999988520244533899872550238
Q gi|255764511|r  227 ELAQGLRSAEKALKAGGLLIVVSFHSLEDR  256 (341)
Q Consensus       227 ~L~~~L~~~~~~L~~gGrl~VISFHSLEDR  256 (341)
                      .-...|..+.+.|+|||+++|+-+-..+|.
T Consensus       266 ~~~~iL~~~~~aL~pgg~lli~e~~~~~~~  295 (360)
T 1tw3_A          266 DAVRILTRCAEALEPGGRILIHERDDLHEN  295 (360)
T ss_dssp             HHHHHHHHHHHTEEEEEEEEEEECCBCGGG
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEECCCCCCC
T ss_conf             999999999997199838999972468998


No 173
>3cc8_A Putative methyltransferase; NP_977653.1, structural genomics, joint center for structural genomics, JCSG; 1.64A {Bacillus cereus atcc 10987}
Probab=95.01  E-value=0.038  Score=33.12  Aligned_cols=54  Identities=17%  Similarity=0.252  Sum_probs=43.0

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHH
Q ss_conf             0986886608388888998376882889999974890999809989999999985
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETM   78 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l   78 (341)
                      +-.++++.+. ..+..++|.=.|.|..+..+.+.+.+++|+|.++.++..|+++.
T Consensus        21 ~~~~~~~~~~-~~~~~ILDIGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~   74 (230)
T 3cc8_A           21 VNPNLLKHIK-KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL   74 (230)
T ss_dssp             CCHHHHTTCC-TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS
T ss_pred             HHHHHHHHCC-CCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHCC
T ss_conf             8999997368-57996999518886999999975998999967256666654113


No 174
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=94.80  E-value=0.23  Score=28.01  Aligned_cols=99  Identities=11%  Similarity=0.073  Sum_probs=65.6

Q ss_pred             HHHHHHHC-CCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHH-HH
Q ss_conf             86886608-388888998376882889999974---890999809989999999985214--885277113278898-76
Q gi|255764511|r   26 EKVIALLN-PAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQ-DY   98 (341)
Q Consensus        26 ~Evl~~l~-~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~-~~   98 (341)
                      -+.+..|. ......++.--.+.|--|..+.+.   .|+|+.+|.|++....|++.++..  .+++.++.++..++. ..
T Consensus        59 g~lL~~L~~~~~~k~vLEiGT~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~ag~~~~i~~~~g~a~e~l~~l  138 (237)
T 3c3y_A           59 GQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNL  138 (237)
T ss_dssp             HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH
T ss_conf             99999999973998899970525789999997489984899996026768999999998499813899962200001788


Q ss_pred             HH----HCCCCEEEEECCCHHHHHHHHHHCC
Q ss_conf             53----1233247862252078887654073
Q gi|255764511|r   99 VP----DKGVDGVVFDLGVSSMQIDCGDRGF  125 (341)
Q Consensus        99 l~----~~~vdgIl~DLGvSS~Qld~~~RGF  125 (341)
                      +.    ...+|.|+.|---+.+. +.-+.-+
T Consensus       139 ~~~~~~~~~fD~IFiDadk~~y~-~y~e~~~  168 (237)
T 3c3y_A          139 LQGQESEGSYDFGFVDADKPNYI-KYHERLM  168 (237)
T ss_dssp             HHSTTCTTCEEEEEECSCGGGHH-HHHHHHH
T ss_pred             HHHCCCCCCCCEEEECCCHHHHH-HHHHHHH
T ss_conf             87403577765899728888899-9999998


No 175
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=94.79  E-value=0.059  Score=31.87  Aligned_cols=47  Identities=23%  Similarity=0.354  Sum_probs=41.5

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHHC
Q ss_conf             888889983768828899999748--90999809989999999985214
Q gi|255764511|r   35 APGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRDY   81 (341)
Q Consensus        35 ~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~~   81 (341)
                      ..+..++|.=.|.|..+..+.+..  .+|+|+|.+++++..|+++++.+
T Consensus        45 ~~~~~vLDiGCG~G~~~i~la~~~~~~~v~GiDis~~~i~~A~~n~~~~   93 (292)
T 3g07_A           45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHY   93 (292)
T ss_dssp             TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC---
T ss_pred             CCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH
T ss_conf             6999599985797899999998789988999709889999999999983


No 176
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=94.74  E-value=0.03  Score=33.75  Aligned_cols=61  Identities=13%  Similarity=0.084  Sum_probs=46.3

Q ss_pred             HHHHHHHHCC--CCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHCCCCE
Q ss_conf             9868866083--8888899837688288999997489-09998099899999999852148852
Q gi|255764511|r   25 LEKVIALLNP--APGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDYKEQF   85 (341)
Q Consensus        25 l~Evl~~l~~--~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~~~r~   85 (341)
                      +....+.+.+  .+|..++|.-.|.|.|+..+.+.++ +|+|+|.-+.+|+.|+++....+..+
T Consensus        42 ~~~~~~~~~~~~~~g~~vLDlGCG~G~~~~~~a~~~~~~V~giD~S~~~i~~a~~~~~~~~~~~  105 (263)
T 2a14_A           42 LECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAY  105 (263)
T ss_dssp             HHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCC
T ss_pred             HHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCC
T ss_conf             9999998166888998899978886289999998479768995189999999999998657651


No 177
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=94.61  E-value=0.25  Score=27.82  Aligned_cols=81  Identities=9%  Similarity=0.099  Sum_probs=58.2

Q ss_pred             CCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHH-HHHHH----HCCCC
Q ss_conf             8888998376882889999974---890999809989999999985214--88527711327889-87653----12332
Q gi|255764511|r   36 PGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQL-QDYVP----DKGVD  105 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i-~~~l~----~~~vd  105 (341)
                      ....++.-..+.|-=+..+...   .|+|+++|.|++....|++.++..  .+++.++.+...+. .+++.    ...||
T Consensus        79 ~ak~iLEIGT~~GySal~~a~al~~~g~l~tie~~~~~~~~Ar~~~~~ag~~~kI~~~~g~A~e~L~~l~~~~~~~~~fD  158 (247)
T 1sui_A           79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD  158 (247)
T ss_dssp             TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred             CCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCCC
T ss_conf             99779996321589999999858546369998517787899999998620145058994428999999985313477644


Q ss_pred             EEEEECCCHHH
Q ss_conf             47862252078
Q gi|255764511|r  106 GVVFDLGVSSM  116 (341)
Q Consensus       106 gIl~DLGvSS~  116 (341)
                      .|+.|---..+
T Consensus       159 fIFIDadK~~Y  169 (247)
T 1sui_A          159 FIFVDADKDNY  169 (247)
T ss_dssp             EEEECSCSTTH
T ss_pred             EEEECCCHHHH
T ss_conf             79963888888


No 178
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA processing, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=94.49  E-value=0.13  Score=29.58  Aligned_cols=75  Identities=12%  Similarity=0.165  Sum_probs=56.0

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHCC--EEEEECCCHHHHHHHHHHHHHC-------CCCEEEECCCH-HHHHHHHHHCCCC
Q ss_conf             888899837688288999997489--0999809989999999985214-------88527711327-8898765312332
Q gi|255764511|r   36 PGKVILDATFGAGGYSRSFCKMGS--NVIALDRDPFAVSCGQETMRDY-------KEQFSLFQATF-SQLQDYVPDKGVD  105 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS~~iL~~~~--~liaiDrD~~ai~~a~~~l~~~-------~~r~~~~~~~F-~~i~~~l~~~~vd  105 (341)
                      ++-.++|.-+|.|.++..+-..++  +++|+|..+..+..+..+.+..       -+++.+++++. ..+.+++....||
T Consensus        46 ~~~~iLeIGcG~G~~l~~lA~~~P~~~~iGiei~~~~~~~~~~~~~~~~~~~~~~l~Nv~~~~~da~~~l~~~~~~~s~d  125 (235)
T 3ckk_A           46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT  125 (235)
T ss_dssp             CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred             CCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCH
T ss_conf             89879998226869999999868687289886135899999989999999987088569998544487766651355400


Q ss_pred             EEEEE
Q ss_conf             47862
Q gi|255764511|r  106 GVVFD  110 (341)
Q Consensus       106 gIl~D  110 (341)
                      .|.+.
T Consensus       126 ~v~i~  130 (235)
T 3ckk_A          126 KMFFL  130 (235)
T ss_dssp             EEEEE
T ss_pred             HCEEE
T ss_conf             10576


No 179
>3bwc_A Spermidine synthase; SAM, SGPP, structural genomics, PSI, protein structure initiative; HET: MSE SAM; 2.30A {Trypanosoma cruzi strain cl brener} PDB: 3bwb_A*
Probab=94.47  E-value=0.19  Score=28.59  Aligned_cols=94  Identities=18%  Similarity=0.237  Sum_probs=58.3

Q ss_pred             CCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHHC-----CCCEEE
Q ss_conf             16078334009868866083888889983768828899999748--90999809989999999985214-----885277
Q gi|255764511|r   15 HTIGDHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRDY-----KEQFSL   87 (341)
Q Consensus        15 ~~~~~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~~-----~~r~~~   87 (341)
                      ++..+|.  |+--+.-...+.|..+.| .=.|.||=..++|+..  .++..+|.||+.+..+++-+...     ..|+.+
T Consensus        77 De~~YhE--~l~h~~l~~h~~pk~VLI-iGgGdG~~~rellk~~~v~~v~~VEID~~Vi~~~~~~~p~~~~~~~dprv~i  153 (304)
T 3bwc_A           77 DEFVYHE--VLGHTSLCSHPKPERVLI-IGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATV  153 (304)
T ss_dssp             THHHHHH--HHHHHHHTTSSSCCEEEE-EECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEE
T ss_pred             CHHHHHH--HHHHHHHHCCCCCCEEEE-ECCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCHHHHCCCCCCCEEE
T ss_conf             5888999--988888743999786999-8389379999999659942799980588999999986544301114986489


Q ss_pred             ECCCHHH-HHHHHHHCCCCEEEEECC
Q ss_conf             1132788-987653123324786225
Q gi|255764511|r   88 FQATFSQ-LQDYVPDKGVDGVVFDLG  112 (341)
Q Consensus        88 ~~~~F~~-i~~~l~~~~vdgIl~DLG  112 (341)
                      +.+.-.. +.+ ..+..+|.|+.|+-
T Consensus       154 ii~D~~~~l~~-~~~~~yDvIi~D~~  178 (304)
T 3bwc_A          154 RVGDGLAFVRQ-TPDNTYDVVIIDTT  178 (304)
T ss_dssp             EESCHHHHHHS-SCTTCEEEEEEECC
T ss_pred             EECHHHHHHHH-CCCCCCCEEEEECC
T ss_conf             98669999974-63468768999089


No 180
>2pt6_A Spermidine synthase; transferase, structural genomics consortium, SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum 3D7} PDB: 2pss_A* 2pt9_A*
Probab=94.45  E-value=0.2  Score=28.50  Aligned_cols=93  Identities=18%  Similarity=0.310  Sum_probs=60.6

Q ss_pred             CCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHHC-----CCCEEE
Q ss_conf             16078334009868866083888889983768828899999748--90999809989999999985214-----885277
Q gi|255764511|r   15 HTIGDHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRDY-----KEQFSL   87 (341)
Q Consensus        15 ~~~~~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~~-----~~r~~~   87 (341)
                      ++..+|.  |+--+.-.+.+.|. .++-.=.|.||=.+.+|+..  .++...|.|++.++.|++.+...     ..|+.+
T Consensus        98 de~~YhE--~l~h~pl~~~~~pk-~VLIiGgGdG~~~rellk~~~~~~v~~VEID~~Vv~~ak~~f~~~~~~~~dprv~v  174 (321)
T 2pt6_A           98 DEFAYHE--MMTHVPMTVSKEPK-NVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNV  174 (321)
T ss_dssp             THHHHHH--HHHHHHHHHSSSCC-EEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEE
T ss_pred             CHHHHHH--HHHHHHHHCCCCCC-EEEEECCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEE
T ss_conf             5768889--98716865199957-69998489539999999729964147852579999999986266234436876269


Q ss_pred             ECCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf             113278898765312332478622
Q gi|255764511|r   88 FQATFSQLQDYVPDKGVDGVVFDL  111 (341)
Q Consensus        88 ~~~~F~~i~~~l~~~~vdgIl~DL  111 (341)
                      +.+.-.+.-+-. ...+|.|+.|+
T Consensus       175 ~~~Da~~~l~~~-~~~yDvIi~D~  197 (321)
T 2pt6_A          175 FIEDASKFLENV-TNTYDVIIVDS  197 (321)
T ss_dssp             EESCHHHHHHHC-CSCEEEEEEEC
T ss_pred             EECHHHHHHHHC-CCCCCEEEEEC
T ss_conf             961699998736-67667799937


No 181
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=94.37  E-value=0.064  Score=31.65  Aligned_cols=70  Identities=16%  Similarity=0.117  Sum_probs=43.6

Q ss_pred             CHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC--EEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHH
Q ss_conf             0098688660838888899837688288999997489--0999809989999999985214--885277113278
Q gi|255764511|r   23 VLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGS--NVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFS   93 (341)
Q Consensus        23 Vll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~--~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~   93 (341)
                      ....++++.+.....+.++|.--|.|..+.+++++++  +++++|. |+.+..++++..+.  .+|+.+...+|-
T Consensus       156 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d~~  229 (332)
T 3i53_A          156 LDYTGIAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF  229 (332)
T ss_dssp             HHHTTGGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred             HHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEEC-HHHHHHHHHHHHHCCCCCCEEEECCCCC
T ss_conf             7899999737864674787528997699999999789986999978-4389999987564167874577337512


No 182
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1- carboxylic acid, PHZM; 1.80A {Pseudomonas aeruginosa PAO1}
Probab=94.36  E-value=0.11  Score=30.18  Aligned_cols=79  Identities=20%  Similarity=0.347  Sum_probs=50.3

Q ss_pred             HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC--EEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHHHHHH
Q ss_conf             98688660838888899837688288999997489--0999809989999999985214--8852771132788987653
Q gi|255764511|r   25 LEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGS--NVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQDYVP  100 (341)
Q Consensus        25 l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~--~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~~~l~  100 (341)
                      ..++.+.+.. .+..++|.--|.|.++.+++++++  +++++|. |+++..+++++...  .+|+.+..++|-+  . .+
T Consensus       157 ~~~~~~~~d~-~~~~vlDvG~G~G~~~~~l~~~~P~l~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~gd~~~--~-~p  231 (334)
T 2ip2_A          157 FHEIPRLLDF-RGRSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ--E-VP  231 (334)
T ss_dssp             HHHHHHHSCC-TTCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT--C-CC
T ss_pred             HHHHHHHHCC-CCCEEEECCCCCCHHHHHHHHHCCCEEEEEECC-CCHHHHHHHHHHHCCCCCEEEEECCCHHH--C-CC
T ss_conf             9998886077-888673038987688888898699649998228-51128998767650777706997177654--3-88


Q ss_pred             HCCCCEEEE
Q ss_conf             123324786
Q gi|255764511|r  101 DKGVDGVVF  109 (341)
Q Consensus       101 ~~~vdgIl~  109 (341)
                       .++|.|++
T Consensus       232 -~~~D~v~~  239 (334)
T 2ip2_A          232 -SNGDIYLL  239 (334)
T ss_dssp             -SSCSEEEE
T ss_pred             -CCCCEEEE
T ss_conf             -75708999


No 183
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=94.34  E-value=0.3  Score=27.33  Aligned_cols=78  Identities=18%  Similarity=0.247  Sum_probs=54.5

Q ss_pred             HCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHHC-----CCCEEEECCCHHHHHHHHHHCCC
Q ss_conf             083888889983768828899999748--90999809989999999985214-----88527711327889876531233
Q gi|255764511|r   32 LNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRDY-----KEQFSLFQATFSQLQDYVPDKGV  104 (341)
Q Consensus        32 l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~~-----~~r~~~~~~~F~~i~~~l~~~~v  104 (341)
                      ..+.|. .++=.-.|.||=.+.+|+..  .++..+|.|++.+..|++-+...     ..|+.++.+.-...-+- ....+
T Consensus       105 ~~~~pk-~VLIiGgGdG~~~rellk~~~v~~v~~VEID~~Vi~~a~~~~~~~~~~~~dprv~i~~~Da~~~l~~-~~~~y  182 (314)
T 2b2c_A          105 AHPDPK-RVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-HKNEF  182 (314)
T ss_dssp             HSSSCC-EEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH-CTTCE
T ss_pred             CCCCCC-EEEEECCCCHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHCHHHCCCCCCCCEEEEECHHHHHHHC-CCCCC
T ss_conf             399978-7999889846999999974995458999608899999976363322545666527997108999741-78888


Q ss_pred             CEEEEEC
Q ss_conf             2478622
Q gi|255764511|r  105 DGVVFDL  111 (341)
Q Consensus       105 dgIl~DL  111 (341)
                      |.|+.|+
T Consensus       183 DvII~D~  189 (314)
T 2b2c_A          183 DVIITDS  189 (314)
T ss_dssp             EEEEECC
T ss_pred             CEEEEEC
T ss_conf             8899968


No 184
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, antibiotic resistance, methyltransferase; 1.44A {Aquifex aeolicus VF5} PDB: 3ftc_A 3fte_A 3ftf_A*
Probab=94.30  E-value=0.15  Score=29.29  Aligned_cols=91  Identities=15%  Similarity=0.109  Sum_probs=68.7

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHH
Q ss_conf             3340098688660838888899837688288999997489-099980998999999998521488527711327889876
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDY   98 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~   98 (341)
                      +.|..++.+++.+++.++..+|+.--|.|-=|+++|+.++ +|+|++.|+..+...+   ..+.+++.++++.+-.++-.
T Consensus        15 ~d~~~~~~iv~~~~~~~~d~VlEIGpG~G~LT~~Ll~~~~~~v~aiE~D~~l~~~l~---~~~~~~~~ii~~D~l~~~~~   91 (249)
T 3ftd_A           15 VSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLK---SIGDERLEVINEDASKFPFC   91 (249)
T ss_dssp             ECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHT---TSCCTTEEEECSCTTTCCGG
T ss_pred             CCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHH---HHCCCCEEEEECCHHHCCHH
T ss_conf             898999999995489998949996998769899999704570789998662001322---22044328996340117864


Q ss_pred             HHHCCCCEEEEECCCH
Q ss_conf             5312332478622520
Q gi|255764511|r   99 VPDKGVDGVVFDLGVS  114 (341)
Q Consensus        99 l~~~~vdgIl~DLGvS  114 (341)
                      .. ..-.-|+.+|-|+
T Consensus        92 ~~-~~~~~vVgNLPY~  106 (249)
T 3ftd_A           92 SL-GKELKVVGNLPYN  106 (249)
T ss_dssp             GS-CSSEEEEEECCTT
T ss_pred             HC-CCCCEEEECCCHH
T ss_conf             62-9762586144210


No 185
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=94.22  E-value=0.32  Score=27.17  Aligned_cols=25  Identities=24%  Similarity=0.337  Sum_probs=15.2

Q ss_pred             HHHHHHHHHHHCCCCCCEEEEEEEC
Q ss_conf             8999999885202445338998725
Q gi|255764511|r  227 ELAQGLRSAEKALKAGGLLIVVSFH  251 (341)
Q Consensus       227 ~L~~~L~~~~~~L~~gGrl~VISFH  251 (341)
                      .-...|..+...|+|||++.|+-+-
T Consensus       285 ~~~~iL~~~~~aL~pgG~lli~e~~  309 (369)
T 3gwz_A          285 DVVRILRRIATAMKPDSRLLVIDNL  309 (369)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEEEEEB
T ss_pred             HHHHHHHHHHHHCCCCCEEEEEEEC
T ss_conf             9999999999965999789999834


No 186
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=94.22  E-value=0.32  Score=27.17  Aligned_cols=76  Identities=13%  Similarity=0.059  Sum_probs=57.5

Q ss_pred             CCCEEEECCCCCCHHHHHHHHH--CCEEEEECCCHHHHHHHHHHHHH-CCCCEEEECCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf             8888998376882889999974--89099980998999999998521-4885277113278898765312332478622
Q gi|255764511|r   36 PGKVILDATFGAGGYSRSFCKM--GSNVIALDRDPFAVSCGQETMRD-YKEQFSLFQATFSQLQDYVPDKGVDGVVFDL  111 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS~~iL~~--~~~liaiDrD~~ai~~a~~~l~~-~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DL  111 (341)
                      ....+++.=.|+|.-++.++..  +.++.++|.||+.+..+++.+.- -..|+.++.+.-.+.-.-.....+|.|+.|+
T Consensus        89 ~p~rvL~lG~G~g~l~r~l~~~~P~~~v~~VEidp~vi~~ar~~f~~~~~~rv~v~~~Da~~~l~~~~~~~~D~Iv~D~  167 (317)
T 3gjy_A           89 SKLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDV  167 (317)
T ss_dssp             GGCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHCCCCCCCEEEEEC
T ss_conf             8877999899689999999997899869999798899999998679988997689978499999750557887799957


No 187
>2i7c_A Spermidine synthase; transferase, structural genomics consortium, SGC; HET: AAT 1PG; 1.71A {Plasmodium falciparum 3D7} PDB: 2hte_A* 3b7p_A* 2pwp_A*
Probab=94.16  E-value=0.24  Score=27.98  Aligned_cols=86  Identities=19%  Similarity=0.323  Sum_probs=60.4

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHHC-----CCCEEEECCCHHHHH
Q ss_conf             09868866083888889983768828899999748--90999809989999999985214-----885277113278898
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRDY-----KEQFSLFQATFSQLQ   96 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~~-----~~r~~~~~~~F~~i~   96 (341)
                      |+--+.-.+.+.|. .++=.=+|.||=.+.+|+..  .++...|.||+.+..|++.+...     ..|+.++...-...-
T Consensus        67 ~l~h~~~~~~~~pk-~vLiiGgG~G~~~~ellk~~~~~~i~~VEiD~~Vi~~a~~~f~~~~~~~~d~rv~v~~~Da~~~l  145 (283)
T 2i7c_A           67 MMTHVPMTVSKEPK-NVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFL  145 (283)
T ss_dssp             HHHHHHHTTSSSCC-EEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHH
T ss_pred             HHHHHHHHCCCCCC-EEEEECCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHH
T ss_conf             99878865299824-49998388349999999749963799974789999999987465024224876528960689999


Q ss_pred             HHHHHCCCCEEEEEC
Q ss_conf             765312332478622
Q gi|255764511|r   97 DYVPDKGVDGVVFDL  111 (341)
Q Consensus        97 ~~l~~~~vdgIl~DL  111 (341)
                      +-. ...+|.|+.|+
T Consensus       146 ~~~-~~~yDvIi~D~  159 (283)
T 2i7c_A          146 ENV-TNTYDVIIVDS  159 (283)
T ss_dssp             HHC-CSCEEEEEEEC
T ss_pred             HHC-CCCCCEEEEEC
T ss_conf             746-88777799947


No 188
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=94.01  E-value=0.35  Score=26.91  Aligned_cols=94  Identities=16%  Similarity=0.120  Sum_probs=66.3

Q ss_pred             CCHHHHHH-HHHCC-CCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHCC---CCEEEECCCHHHH
Q ss_conf             40098688-66083-8888899837688288999997489-09998099899999999852148---8527711327889
Q gi|255764511|r   22 PVLLEKVI-ALLNP-APGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDYK---EQFSLFQATFSQL   95 (341)
Q Consensus        22 PVll~Evl-~~l~~-~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~~---~r~~~~~~~F~~i   95 (341)
                      |-.++|.| +.|.. ..+..++|.=-|.|.-+.+-|.+|. +++.+|.|+.|+...++.++..+   ..+.+........
T Consensus        37 ~~~vrealFn~l~~~~~~~~~LDLFaGSG~lglEAlSRGA~~v~fVE~~~~a~~~l~~N~~~l~~~~~~~~~~~~d~~~~  116 (201)
T 2ift_A           37 GDRVKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDF  116 (201)
T ss_dssp             -CHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHH
T ss_pred             CHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCHHEEEEHHHHHH
T ss_conf             48999999998776429987998788828989999988993999997405577899999998386632002320345655


Q ss_pred             HHHHH-HCCCCEEEEECCCHH
Q ss_conf             87653-123324786225207
Q gi|255764511|r   96 QDYVP-DKGVDGVVFDLGVSS  115 (341)
Q Consensus        96 ~~~l~-~~~vdgIl~DLGvSS  115 (341)
                      ..... ...+|-|++|==|..
T Consensus       117 l~~~~~~~~fDlIFlDPPY~~  137 (201)
T 2ift_A          117 LKQPQNQPHFDVVFLDPPFHF  137 (201)
T ss_dssp             TTSCCSSCCEEEEEECCCSSS
T ss_pred             HHHCCCCCCCCEEEECCCCCC
T ss_conf             430024676655885797555


No 189
>1or8_A Protein arginine N-methyltransferase 1; protein arginine methylation, adoMet-dependent methylation, transferase; HET: SAH; 2.35A {Rattus norvegicus} SCOP: c.66.1.6 PDB: 1orh_A* 1ori_A*
Probab=93.94  E-value=0.12  Score=29.87  Aligned_cols=76  Identities=17%  Similarity=0.294  Sum_probs=57.6

Q ss_pred             CCCCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHH--CCCCEEEECCCHHHHHHHHHHCCCCEEEE
Q ss_conf             838888899837688288999997489-099980998999999998521--48852771132788987653123324786
Q gi|255764511|r   33 NPAPGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRD--YKEQFSLFQATFSQLQDYVPDKGVDGVVF  109 (341)
Q Consensus        33 ~~~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~--~~~r~~~~~~~F~~i~~~l~~~~vdgIl~  109 (341)
                      ...++.+++|.--|.|..|....+.+. +|+|+|..+ +...+++....  +.+++++++++..++.  ++...+|-|+.
T Consensus        54 ~~~~~~~VLDiG~G~G~ls~~aa~~Ga~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~~~~~~~~l~--~~~~~~Dvivs  130 (340)
T 1or8_A           54 HLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVE--LPVEKVDIIIS  130 (340)
T ss_dssp             HHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--CSSSCEEEEEE
T ss_pred             HCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCHH-HHHHHHHHHHHCCCCCEEEEEEEEEEECC--CCCCCCCEEEE
T ss_conf             1059497999837887999999980898899964619-99999999997287832799973134303--78653107997


Q ss_pred             EC
Q ss_conf             22
Q gi|255764511|r  110 DL  111 (341)
Q Consensus       110 DL  111 (341)
                      ++
T Consensus       131 E~  132 (340)
T 1or8_A          131 EW  132 (340)
T ss_dssp             CC
T ss_pred             EE
T ss_conf             50


No 190
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=93.93  E-value=0.36  Score=26.81  Aligned_cols=96  Identities=16%  Similarity=0.154  Sum_probs=67.7

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHH-HHHHHHH---CCCC
Q ss_conf             88888998376882889999974---890999809989999999985214--8852771132788-9876531---2332
Q gi|255764511|r   35 APGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQ-LQDYVPD---KGVD  105 (341)
Q Consensus        35 ~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~-i~~~l~~---~~vd  105 (341)
                      .....++..-.|.|-=+..+...   +++|+.+|.|++....|++.++..  .+++.++.++..+ +.+++..   ..+|
T Consensus        68 ~~~k~vLEiGt~~GySal~lA~al~~~g~v~tie~~~~~~~~Ar~~~~~ag~~~~i~~~~g~a~e~l~~l~~~~~~~~fD  147 (229)
T 2avd_A           68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD  147 (229)
T ss_dssp             TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred             HCCCEEEEEECCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHCCCCCCE
T ss_conf             49978999844468999999943799978999957465999999999976998856999950045677776413577721


Q ss_pred             EEEEECCCHHHHHHHHHHCCCCCCCC
Q ss_conf             47862252078887654073445664
Q gi|255764511|r  106 GVVFDLGVSSMQIDCGDRGFSFQKSG  131 (341)
Q Consensus       106 gIl~DLGvSS~Qld~~~RGFSf~~dg  131 (341)
                      .|+.|-.-+.+. +.-+......+.|
T Consensus       148 ~iFiDa~k~~y~-~~~~~~~~lL~~g  172 (229)
T 2avd_A          148 VAVVDADKENCS-AYYERCLQLLRPG  172 (229)
T ss_dssp             EEEECSCSTTHH-HHHHHHHHHEEEE
T ss_pred             EEEECCCHHHHH-HHHHHHHHHCCCC
T ss_conf             899438877779-9999999655898


No 191
>1vlm_A SAM-dependent methyltransferase; possible histamine N-methyltransferase, structural genomics, JCSG, protein structure initiative, PSI; 2.20A {Thermotoga maritima MSB8} SCOP: c.66.1.41
Probab=93.79  E-value=0.057  Score=31.99  Aligned_cols=79  Identities=14%  Similarity=0.172  Sum_probs=51.6

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH
Q ss_conf             33400986886608388888998376882889999974890999809989999999985214885277113278898765
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYV   99 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l   99 (341)
                      |......++...-...|++.++|.=.|.|..+..+    .+++|+|..+.++..|+++      .+.+++++..++.  .
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l----~~~~giD~s~~~i~~a~~~------~i~~~~~d~~~l~--~   98 (219)
T 1vlm_A           31 HRFAYLSELQAVKCLLPEGRGVEIGVGTGRFAVPL----KIKIGVEPSERMAEIARKR------GVFVLKGTAENLP--L   98 (219)
T ss_dssp             THHHHHHHHHHHHHHCCSSCEEEETCTTSTTHHHH----TCCEEEESCHHHHHHHHHT------TCEEEECBTTBCC--S
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH----HHEEEEECCHHHHHHHHHC------CCEEEECCHHHCC--C
T ss_conf             58999999999972389990999858677999977----5869994999999999986------9989987778789--9


Q ss_pred             HHCCCCEEEEE
Q ss_conf             31233247862
Q gi|255764511|r  100 PDKGVDGVVFD  110 (341)
Q Consensus       100 ~~~~vdgIl~D  110 (341)
                      +...+|.|+.-
T Consensus        99 ~~~sfD~V~~~  109 (219)
T 1vlm_A           99 KDESFDFALMV  109 (219)
T ss_dssp             CTTCEEEEEEE
T ss_pred             CCCCCCEECCC
T ss_conf             87873320313


No 192
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=93.77  E-value=0.38  Score=26.63  Aligned_cols=78  Identities=21%  Similarity=0.276  Sum_probs=54.2

Q ss_pred             HHCCCCCCEEEECCCCCCHHHHHHHHHC-CEEEEECCCHHHHHHHHHHHHH-----------CCCCEEEECCCHHHHHHH
Q ss_conf             6083888889983768828899999748-9099980998999999998521-----------488527711327889876
Q gi|255764511|r   31 LLNPAPGKVILDATFGAGGYSRSFCKMG-SNVIALDRDPFAVSCGQETMRD-----------YKEQFSLFQATFSQLQDY   98 (341)
Q Consensus        31 ~l~~~~~g~~iD~TlG~GGHS~~iL~~~-~~liaiDrD~~ai~~a~~~l~~-----------~~~r~~~~~~~F~~i~~~   98 (341)
                      ...+.|. .++-.=+|.||=...+|+.. .++.++|.||+.+..|++.+..           ..+|+.++...-...-+ 
T Consensus        71 ~~~~~p~-~VLiiG~G~G~~~~~~l~~~~~~v~~VEiD~~vi~~a~~~~~~~~~~~e~~~~~~d~rv~v~~~Da~~~l~-  148 (281)
T 1mjf_A           71 LAHPKPK-RVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIK-  148 (281)
T ss_dssp             HHSSCCC-EEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHH-
T ss_pred             HCCCCCC-EEEEEECCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEECHHHHHHH-
T ss_conf             5099988-79999289439999998438835899706889999999851114213445303579966999621899973-


Q ss_pred             HHHCCCCEEEEEC
Q ss_conf             5312332478622
Q gi|255764511|r   99 VPDKGVDGVVFDL  111 (341)
Q Consensus        99 l~~~~vdgIl~DL  111 (341)
                       ...++|.|+.|+
T Consensus       149 -~~~~yDvIi~D~  160 (281)
T 1mjf_A          149 -NNRGFDVIIADS  160 (281)
T ss_dssp             -HCCCEEEEEEEC
T ss_pred             -CCCCCCEEEEEC
T ss_conf             -078878899918


No 193
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca YX}
Probab=93.71  E-value=0.15  Score=29.29  Aligned_cols=76  Identities=17%  Similarity=0.280  Sum_probs=55.6

Q ss_pred             HHHHHHHHCCCCC-CEEEECCCCCC--HHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHH
Q ss_conf             9868866083888-88998376882--889999974---89099980998999999998521488527711327889876
Q gi|255764511|r   25 LEKVIALLNPAPG-KVILDATFGAG--GYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDY   98 (341)
Q Consensus        25 l~Evl~~l~~~~~-g~~iD~TlG~G--GHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~   98 (341)
                      +...+.+|....| ..|||.=.|.|  |++..++..   ..+|+++|.||.++..++.++... .+..+++..+.+...+
T Consensus        65 l~Ravr~la~~~GirqfLDlGcG~gt~~~~he~a~~~~P~arVv~vD~dp~~la~ara~l~~~-~~~~~v~aD~~~p~~i  143 (274)
T 2qe6_A           65 LVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD-PNTAVFTADVRDPEYI  143 (274)
T ss_dssp             HHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC-TTEEEEECCTTCHHHH
T ss_pred             HHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCC-CCEEEEECCCCCHHHH
T ss_conf             999999998745977899947388986419999998789977999959788999987650479-9768997430273434


Q ss_pred             HHH
Q ss_conf             531
Q gi|255764511|r   99 VPD  101 (341)
Q Consensus        99 l~~  101 (341)
                      +..
T Consensus       144 l~~  146 (274)
T 2qe6_A          144 LNH  146 (274)
T ss_dssp             HHS
T ss_pred             HCC
T ss_conf             225


No 194
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research, nysgxrc; 2.33A {Bacteroides vulgatus atcc 8482}
Probab=93.58  E-value=0.39  Score=26.60  Aligned_cols=32  Identities=13%  Similarity=0.111  Sum_probs=23.7

Q ss_pred             HHHHHHHHHHHHCCCCCCEEEEEEECCCHHHH
Q ss_conf             78999999885202445338998725502389
Q gi|255764511|r  226 EELAQGLRSAEKALKAGGLLIVVSFHSLEDRL  257 (341)
Q Consensus       226 ~~L~~~L~~~~~~L~~gGrl~VISFHSLEDRi  257 (341)
                      +....+|..+.+.|+|||+++|+.+-.-+++.
T Consensus       264 ~~~~~iL~~i~~~L~pgG~lli~d~~~~~~~~  295 (363)
T 3dp7_A          264 EEVISILTRVAQSIGKDSKVYIMETLWDRQRY  295 (363)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEEECCTTSCSS
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
T ss_conf             44545799999668888289999831589887


No 195
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A*
Probab=93.55  E-value=0.29  Score=27.40  Aligned_cols=94  Identities=15%  Similarity=0.219  Sum_probs=61.0

Q ss_pred             CCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHH----C-CCCEEE
Q ss_conf             16078334009868866083888889983768828899999748--9099980998999999998521----4-885277
Q gi|255764511|r   15 HTIGDHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRD----Y-KEQFSL   87 (341)
Q Consensus        15 ~~~~~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~----~-~~r~~~   87 (341)
                      ++..+|.  |+--+--...+.|. .++=.=.|.||=...+|+..  .++..+|.|++.+..|++-+..    + ..|+.+
T Consensus        77 de~~YhE--~l~h~pl~~~~~pk-~VLIiGgG~G~~~~ellk~~~~~~v~~VEiD~~Vi~~a~~~~~~~~~~~~dpRv~i  153 (304)
T 2o07_A           77 DEFSYQE--MIANLPLCSHPNPR-KVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTL  153 (304)
T ss_dssp             THHHHHH--HHHHHHHTTSSSCC-EEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEE
T ss_pred             CHHHHHH--HHHHHHHHCCCCCC-EEEEECCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEE
T ss_conf             4888889--88879986199978-69998799459999998659853268760469999999985555334435772489


Q ss_pred             ECCCHHHHHHHHHHCCCCEEEEECC
Q ss_conf             1132788987653123324786225
Q gi|255764511|r   88 FQATFSQLQDYVPDKGVDGVVFDLG  112 (341)
Q Consensus        88 ~~~~F~~i~~~l~~~~vdgIl~DLG  112 (341)
                      +.....+.-+- ....+|.|+.|+-
T Consensus       154 ~~~Da~~~l~~-~~~~yDvIi~D~~  177 (304)
T 2o07_A          154 HVGDGFEFMKQ-NQDAFDVIITDSS  177 (304)
T ss_dssp             EESCHHHHHHT-CSSCEEEEEEECC
T ss_pred             EEHHHHHHHHH-CCCCCCEEEECCC
T ss_conf             96079999974-7777888999089


No 196
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=93.41  E-value=0.1  Score=30.37  Aligned_cols=89  Identities=20%  Similarity=0.196  Sum_probs=60.9

Q ss_pred             HHHHHHHHHCCCCCC-EEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHCCCCEEE-ECCCHHHHHHH-H
Q ss_conf             098688660838888-899837688288999997489-0999809989999999985214885277-11327889876-5
Q gi|255764511|r   24 LLEKVIALLNPAPGK-VILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDYKEQFSL-FQATFSQLQDY-V   99 (341)
Q Consensus        24 ll~Evl~~l~~~~~g-~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~~~r~~~-~~~~F~~i~~~-l   99 (341)
                      =|.+.++.+.+...| +.+|.--..||.|..+|+.+. +|||+|.--.-+.   ..+.. ..|+.. -..|+.++... +
T Consensus        24 KL~~al~~f~i~~~gk~~lDiGaStGGFTd~lLq~GA~~V~aVDVG~~qL~---~~lr~-d~rV~~~E~~n~R~~~~~~~   99 (232)
T 3opn_A           24 KLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLA---WKIRS-DERVVVMEQFNFRNAVLADF   99 (232)
T ss_dssp             HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCC---HHHHT-CTTEEEECSCCGGGCCGGGC
T ss_pred             HHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCCHHHH---HHHHC-CCCCCCHHHHCCCCCCHHHC
T ss_conf             999999977998689989985889858999999809878999943703430---77743-98703202101445533330


Q ss_pred             HHCCCCEEEEECCCHHH
Q ss_conf             31233247862252078
Q gi|255764511|r  100 PDKGVDGVVFDLGVSSM  116 (341)
Q Consensus       100 ~~~~vdgIl~DLGvSS~  116 (341)
                      ....+|.|..|+-.-|.
T Consensus       100 ~~~~~Dlvv~DvSFISl  116 (232)
T 3opn_A          100 EQGRPSFTSIDVSFISL  116 (232)
T ss_dssp             CSCCCSEEEECCSSSCG
T ss_pred             CCCCCCEEEECCCHHHH
T ss_conf             46888789970651769


No 197
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=93.36  E-value=0.38  Score=26.65  Aligned_cols=94  Identities=15%  Similarity=0.161  Sum_probs=60.7

Q ss_pred             CCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHH----C-CCCEE
Q ss_conf             116078334009868866083888889983768828899999748--9099980998999999998521----4-88527
Q gi|255764511|r   14 HHTIGDHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRD----Y-KEQFS   86 (341)
Q Consensus        14 ~~~~~~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~----~-~~r~~   86 (341)
                      .++..+|.  |+--+--...+.|.. ++=.=.|.||=...+|+..  .++..+|.||+.+..|++-+..    + ..|+.
T Consensus        56 ~de~~Yhe--~l~h~~l~~~~~pk~-VLiiGgG~G~~~~~~l~~~~~~~v~~VEiD~~Vi~~a~~~~~~~~~~~~dprv~  132 (275)
T 1iy9_A           56 KDEFVYHE--MVAHVPLFTHPNPEH-VLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVD  132 (275)
T ss_dssp             TTHHHHHH--HHHHHHHHHSSSCCE-EEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEE
T ss_pred             CCCCHHHH--HHHHHHHHCCCCCCE-EEEEECCCHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHCHHHCCCCCCCCCE
T ss_conf             78006679--987788750999675-999907963999999965996469999708899999998572313532387743


Q ss_pred             EECCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf             7113278898765312332478622
Q gi|255764511|r   87 LFQATFSQLQDYVPDKGVDGVVFDL  111 (341)
Q Consensus        87 ~~~~~F~~i~~~l~~~~vdgIl~DL  111 (341)
                      ++...-...-.- ....+|.|+.|+
T Consensus       133 i~~~Da~~~l~~-~~~~yDvIi~D~  156 (275)
T 1iy9_A          133 VQVDDGFMHIAK-SENQYDVIMVDS  156 (275)
T ss_dssp             EEESCSHHHHHT-CCSCEEEEEESC
T ss_pred             EEECHHHHHHHC-CCCCCCEEEEEC
T ss_conf             898858998750-567767899938


No 198
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer, dimer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=93.25  E-value=0.19  Score=28.54  Aligned_cols=78  Identities=21%  Similarity=0.344  Sum_probs=57.9

Q ss_pred             CCCCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHH--CCCCEEEECCCHHHHHHHHHHCCCCEEEE
Q ss_conf             838888899837688288999997489-099980998999999998521--48852771132788987653123324786
Q gi|255764511|r   33 NPAPGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRD--YKEQFSLFQATFSQLQDYVPDKGVDGVVF  109 (341)
Q Consensus        33 ~~~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~--~~~r~~~~~~~F~~i~~~l~~~~vdgIl~  109 (341)
                      ...++.+++|.--|.|..|....+.+. +|+|+|.++. +..|++..+.  ..+++.+++++..++.  +....+|.|+.
T Consensus        35 ~~~~~~~VLDiGcGtG~ls~~aa~~Ga~~V~a~d~s~~-~~~a~~~~~~~~~~~~i~~i~~~~~~~~--~~~~~~D~vvs  111 (328)
T 1g6q_1           35 DLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSI-IEMAKELVELNGFSDKITLLRGKLEDVH--LPFPKVDIIIS  111 (328)
T ss_dssp             HHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTSC--CSSSCEEEEEE
T ss_pred             CCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECHHH-HHHHHHHHHHCCCCCEEEEEEEEEECCC--CCCCCCCEEEE
T ss_conf             00697999997899779999999719998999959799-9999999987387623899971210055--77666429999


Q ss_pred             ECCC
Q ss_conf             2252
Q gi|255764511|r  110 DLGV  113 (341)
Q Consensus       110 DLGv  113 (341)
                      ++-.
T Consensus       112 e~~~  115 (328)
T 1g6q_1          112 EWMG  115 (328)
T ss_dssp             CCCB
T ss_pred             EECC
T ss_conf             7332


No 199
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=93.01  E-value=0.51  Score=25.85  Aligned_cols=96  Identities=14%  Similarity=0.013  Sum_probs=63.1

Q ss_pred             HHHHHCCCCC-CEEEECCCCCCHHHHHHHHH----C----CEEEEECCCHHHHHHHHHHHHHCC----CCEEEECCCHHH
Q ss_conf             8866083888-88998376882889999974----8----909998099899999999852148----852771132788
Q gi|255764511|r   28 VIALLNPAPG-KVILDATFGAGGYSRSFCKM----G----SNVIALDRDPFAVSCGQETMRDYK----EQFSLFQATFSQ   94 (341)
Q Consensus        28 vl~~l~~~~~-g~~iD~TlG~GGHS~~iL~~----~----~~liaiDrD~~ai~~a~~~l~~~~----~r~~~~~~~F~~   94 (341)
                      +++.+...+. ..++|.=.|.|..+..||+.    .    .+++|+|..+.++..++++++..+    -++.+....+..
T Consensus        43 ~l~~~~~~~~~~~VLdiGcG~G~~~~~il~~l~~~~~~~~~~~~~vD~s~~~l~~ak~~~~~~~~~~~~~~~~~~~~~~~  122 (292)
T 2aot_A           43 IIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSE  122 (292)
T ss_dssp             HSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHH
T ss_pred             HHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHH
T ss_conf             99985167999869998797997789999988874478777599998988999999999887413355301102351654


Q ss_pred             HHHH----HHHCCCCEEEEECCCHHHHHHHHHHCC
Q ss_conf             9876----531233247862252078887654073
Q gi|255764511|r   95 LQDY----VPDKGVDGVVFDLGVSSMQIDCGDRGF  125 (341)
Q Consensus        95 i~~~----l~~~~vdgIl~DLGvSS~Qld~~~RGF  125 (341)
                      ....    .....+|.|++=  -+-++++++..-+
T Consensus       123 ~~~~~~~~~~~~~fD~I~~~--~~l~~~~d~~~~l  155 (292)
T 2aot_A          123 YQSRMLEKKELQKWDFIHMI--QMLYYVKDIPATL  155 (292)
T ss_dssp             HHHHHHTTTCCCCEEEEEEE--SCGGGCSCHHHHH
T ss_pred             CCCHHHCCCCCCCEEEEEEC--CHHHHHHHHHHHH
T ss_conf             04422155678986799976--8044310399999


No 200
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=92.99  E-value=0.47  Score=26.04  Aligned_cols=80  Identities=19%  Similarity=0.305  Sum_probs=56.4

Q ss_pred             HHCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHHC-----CCCEEEECCCHHHHHHHHHHCC
Q ss_conf             6083888889983768828899999748--90999809989999999985214-----8852771132788987653123
Q gi|255764511|r   31 LLNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRDY-----KEQFSLFQATFSQLQDYVPDKG  103 (341)
Q Consensus        31 ~l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~~-----~~r~~~~~~~F~~i~~~l~~~~  103 (341)
                      .+.+.|..+.| .=+|.||=...+|+..  .++..+|.||+.+..|++-+...     ..|+.++.+.....-.-. ...
T Consensus        86 ~~~~~pk~VLi-iGgG~G~~~~e~l~~~~~~~v~~VEID~~Vi~~a~~~~~~~~~~~~d~rv~ii~~Da~~~l~~~-~~~  163 (296)
T 1inl_A           86 FLHPNPKKVLI-IGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF-KNE  163 (296)
T ss_dssp             HHSSSCCEEEE-EECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC-SSC
T ss_pred             HHCCCCCEEEE-ECCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHC-CCC
T ss_conf             61999787999-8798279999999649977178863578999999987676224336996089961489999747-887


Q ss_pred             CCEEEEECC
Q ss_conf             324786225
Q gi|255764511|r  104 VDGVVFDLG  112 (341)
Q Consensus       104 vdgIl~DLG  112 (341)
                      +|.|+.|+-
T Consensus       164 yDvIi~D~~  172 (296)
T 1inl_A          164 FDVIIIDST  172 (296)
T ss_dssp             EEEEEEEC-
T ss_pred             CCEEEEECC
T ss_conf             768999089


No 201
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=92.88  E-value=0.53  Score=25.73  Aligned_cols=81  Identities=10%  Similarity=0.098  Sum_probs=62.1

Q ss_pred             CCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHHHHHHH---CCCCEE
Q ss_conf             8888998376882889999974---890999809989999999985214--88527711327889876531---233247
Q gi|255764511|r   36 PGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQDYVPD---KGVDGV  107 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~~~l~~---~~vdgI  107 (341)
                      +...+++--.|.|.=|..+.+.   .++++++|.+++....|++.+...  .+++.+..+...+.-..+..   ..+|.|
T Consensus        58 ~pk~ILEiGt~~G~St~~la~al~~~g~i~tie~~~~~~~~a~~~~~~~g~~~~i~~~~~~~~d~l~~L~~~~~~~fD~i  137 (223)
T 3duw_A           58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI  137 (223)
T ss_dssp             TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred             CCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEE
T ss_conf             99889998344278999999748888859999448888999999999849976466873452367777650578766599


Q ss_pred             EEECCCHHH
Q ss_conf             862252078
Q gi|255764511|r  108 VFDLGVSSM  116 (341)
Q Consensus       108 l~DLGvSS~  116 (341)
                      +.|-.-..+
T Consensus       138 fiD~~~~~~  146 (223)
T 3duw_A          138 FIDADKQNN  146 (223)
T ss_dssp             EECSCGGGH
T ss_pred             EEECCHHHH
T ss_conf             996574668


No 202
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=92.78  E-value=0.54  Score=25.65  Aligned_cols=78  Identities=24%  Similarity=0.326  Sum_probs=52.6

Q ss_pred             HHHHHHHHCC-CCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHH--
Q ss_conf             9868866083-88888998376882889999974---89099980998999999998521488527711327889876--
Q gi|255764511|r   25 LEKVIALLNP-APGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDY--   98 (341)
Q Consensus        25 l~Evl~~l~~-~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~--   98 (341)
                      |.|+.+-+.. +++..++|.--+-||-++.+++.   .++++|+|.-+         .++. ....++++++.+....  
T Consensus        10 L~EI~~k~~l~~~~~~vlDLg~aPGgw~q~~~~~~~~~~~v~~vd~~~---------~~~i-~~~~~~~gd~~~~~~~~~   79 (180)
T 1ej0_A           10 LDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP---------MDPI-VGVDFLQGDFRDELVMKA   79 (180)
T ss_dssp             HHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC---------CCCC-TTEEEEESCTTSHHHHHH
T ss_pred             HHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCC---------CCCC-CCCEEECCCCHHHHHHHH
T ss_conf             999999848667898699973258964289887528984089974564---------6556-896785155002345665


Q ss_pred             ----HHHCCCCEEEEECC
Q ss_conf             ----53123324786225
Q gi|255764511|r   99 ----VPDKGVDGVVFDLG  112 (341)
Q Consensus        99 ----l~~~~vdgIl~DLG  112 (341)
                          ....++|-|+.|.+
T Consensus        80 ~~~~~~~~~~DlVlSD~a   97 (180)
T 1ej0_A           80 LLERVGDSKVQVVMSDMA   97 (180)
T ss_dssp             HHHHHTTCCEEEEEECCC
T ss_pred             HHHHCCCCCCCEEECCCC
T ss_conf             543224654248852357


No 203
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A*
Probab=92.76  E-value=0.084  Score=30.91  Aligned_cols=61  Identities=15%  Similarity=0.187  Sum_probs=45.9

Q ss_pred             HHHHHHHH--CCCCCCEEEECCCCCCHHHHHHHHHC-CEEEEECCCHHHHHHHHHHHHHCCCCE
Q ss_conf             98688660--83888889983768828899999748-909998099899999999852148852
Q gi|255764511|r   25 LEKVIALL--NPAPGKVILDATFGAGGYSRSFCKMG-SNVIALDRDPFAVSCGQETMRDYKEQF   85 (341)
Q Consensus        25 l~Evl~~l--~~~~~g~~iD~TlG~GGHS~~iL~~~-~~liaiDrD~~ai~~a~~~l~~~~~r~   85 (341)
                      +.++.+.+  .+.+|..++|.-.|.|.|+..++... .+|+|+|..+.++..|++.+...+..+
T Consensus        43 ~~~l~~~~~~~~~~g~~vLDlGCG~G~~~~~l~~~~~~~V~giD~S~~~i~~a~~~~~~~~~~~  106 (265)
T 2i62_A           43 LKNLFKIFCLGAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAF  106 (265)
T ss_dssp             HHHHHHHHHSSSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCC
T ss_pred             HHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCC
T ss_conf             9999997278888898899967877676999997219989995699999999999987547762


No 204
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, alternative splicing; 2.55A {Rattus norvegicus}
Probab=92.67  E-value=0.41  Score=26.45  Aligned_cols=75  Identities=13%  Similarity=0.261  Sum_probs=56.4

Q ss_pred             CCCCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHH--CCCCEEEECCCHHHHHHHHHHCCCCEEEE
Q ss_conf             838888899837688288999997489-099980998999999998521--48852771132788987653123324786
Q gi|255764511|r   33 NPAPGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRD--YKEQFSLFQATFSQLQDYVPDKGVDGVVF  109 (341)
Q Consensus        33 ~~~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~--~~~r~~~~~~~F~~i~~~l~~~~vdgIl~  109 (341)
                      ..-++.+++|.--|.|-.|...-+++. +|+|+|..+ +...|++..+.  +.+++++++++..++.  + ..++|-|+-
T Consensus       155 ~~~~~kvVLDvGcGtGiLs~~AA~aGA~kV~avE~S~-~a~~A~~~v~~Ngl~d~I~vi~g~~e~l~--l-pe~vDvIVS  230 (480)
T 3b3j_A          155 TDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--L-PEQVDIIIS  230 (480)
T ss_dssp             GGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--C-SSCEEEEEC
T ss_pred             HHCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCHH-HHHHHHHHHHHCCCCCCEEEEECCHHHCC--C-CCCCCEEEE
T ss_conf             5359898999688836999999985998899990959-99999999997499861689975276567--6-766678999


Q ss_pred             EC
Q ss_conf             22
Q gi|255764511|r  110 DL  111 (341)
Q Consensus       110 DL  111 (341)
                      ++
T Consensus       231 E~  232 (480)
T 3b3j_A          231 EP  232 (480)
T ss_dssp             CC
T ss_pred             EC
T ss_conf             83


No 205
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=92.53  E-value=0.59  Score=25.43  Aligned_cols=75  Identities=13%  Similarity=0.131  Sum_probs=58.7

Q ss_pred             CCCCHHHHHHHHHCCC------CCCEEEECCCCCCHHHHHHHHH-CC-EEEEECCCHHHHHHHHHHHHHCCCCEEEECCC
Q ss_conf             3340098688660838------8888998376882889999974-89-09998099899999999852148852771132
Q gi|255764511|r   20 HVPVLLEKVIALLNPA------PGKVILDATFGAGGYSRSFCKM-GS-NVIALDRDPFAVSCGQETMRDYKEQFSLFQAT   91 (341)
Q Consensus        20 H~PVll~Evl~~l~~~------~~g~~iD~TlG~GGHS~~iL~~-~~-~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~   91 (341)
                      ..|-+.+.+++.++..      .+..+||.-=|.|.-|.++|+. .+ ++++++.|+.-+..-++.++.  .++.+++..
T Consensus        36 ~d~~l~~kIv~~l~l~~~~~~~~~~~IlEIgPG~G~lT~~Ll~~~~pk~~i~iE~D~~~~~~L~~~~~~--~~~~ii~~D  113 (353)
T 1i4w_A           36 WNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEG--SPLQILKRD  113 (353)
T ss_dssp             CCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTT--SSCEEECSC
T ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCC--CCCEEEECC
T ss_conf             899999999987367633357789969998999889999998525887699997778899999987145--884799464


Q ss_pred             HHHHH
Q ss_conf             78898
Q gi|255764511|r   92 FSQLQ   96 (341)
Q Consensus        92 F~~i~   96 (341)
                      .-..+
T Consensus       114 ~l~~~  118 (353)
T 1i4w_A          114 PYDWS  118 (353)
T ss_dssp             TTCHH
T ss_pred             HHHHH
T ss_conf             56532


No 206
>3b3f_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase, catalytic domain, alternative splicing, chromatin regulator; HET: SAH; 2.20A {Rattus norvegicus} PDB: 3b3g_A 2v74_B* 2v7e_A
Probab=92.52  E-value=0.5  Score=25.91  Aligned_cols=76  Identities=16%  Similarity=0.306  Sum_probs=56.4

Q ss_pred             HCCCCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHH--CCCCEEEECCCHHHHHHHHHHCCCCEEE
Q ss_conf             0838888899837688288999997489-099980998999999998521--4885277113278898765312332478
Q gi|255764511|r   32 LNPAPGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRD--YKEQFSLFQATFSQLQDYVPDKGVDGVV  108 (341)
Q Consensus        32 l~~~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~--~~~r~~~~~~~F~~i~~~l~~~~vdgIl  108 (341)
                      ....++.+++|.--|.|..|....+.+. +|+|+|..+.+ ..+++..+.  +.++++++++...++.  ++ .++|.|+
T Consensus        42 ~~~~~~~~VLDiGcG~G~ls~~aa~~Ga~~V~~~e~s~~~-~~~~~~~~~n~~~~~I~~i~~~~~~l~--l~-~~~Dviv  117 (341)
T 3b3f_A           42 HTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMA-QHAEVLVKSNNLTDRIVVIPGKVEEVS--LP-EQVDIII  117 (341)
T ss_dssp             GGGTTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHH-HHHHHHHHHTTCTTTEEEEESCTTTCC--CS-SCEEEEE
T ss_pred             HHHCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHH-HHHHHHHHHCCCCCCCEEEEEEHHHCC--CC-CCCCEEE
T ss_conf             4225979899966685399999997699989999790999-999999998599864007960366525--67-6633798


Q ss_pred             EEC
Q ss_conf             622
Q gi|255764511|r  109 FDL  111 (341)
Q Consensus       109 ~DL  111 (341)
                      .++
T Consensus       118 se~  120 (341)
T 3b3f_A          118 SEP  120 (341)
T ss_dssp             CCC
T ss_pred             EEC
T ss_conf             750


No 207
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=92.49  E-value=0.17  Score=28.88  Aligned_cols=94  Identities=16%  Similarity=0.184  Sum_probs=59.5

Q ss_pred             CCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHH-----C-CCCE
Q ss_conf             116078334009868866083888889983768828899999748--9099980998999999998521-----4-8852
Q gi|255764511|r   14 HHTIGDHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRD-----Y-KEQF   85 (341)
Q Consensus        14 ~~~~~~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~-----~-~~r~   85 (341)
                      .++..+|.  |+--+--...+.|. .++-.-+|.||=..++|+..  .++..+|.||+.+..|++.+..     + ..|+
T Consensus        64 ~de~~Yhe--~l~h~pl~~~~~p~-~VLiiGgG~G~~~~e~lk~~~v~~v~~VEiD~~Vi~~a~~~~~~~~~~~~~dprv  140 (294)
T 3adn_A           64 RDEFIYHE--MMTHVPLLAHGHAK-HVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRF  140 (294)
T ss_dssp             TTHHHHHH--HHHHHHHHHSTTCC-EEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTC
T ss_pred             CCHHHHHH--HHHHHHHHCCCCCC-EEEEECCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCE
T ss_conf             76789999--99888875099856-6999889837999999981996638997178999999874484113554678857


Q ss_pred             EEECCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf             77113278898765312332478622
Q gi|255764511|r   86 SLFQATFSQLQDYVPDKGVDGVVFDL  111 (341)
Q Consensus        86 ~~~~~~F~~i~~~l~~~~vdgIl~DL  111 (341)
                      .++.+.-...-+- ....+|.|+.|+
T Consensus       141 ~i~~~Da~~~l~~-~~~~yDvIi~D~  165 (294)
T 3adn_A          141 KLVIDDGVNFVNQ-TSQTFDVIISDC  165 (294)
T ss_dssp             CEECSCSCC---C-CCCCEEEEEECC
T ss_pred             EEEECHHHHHHHH-CCCCCCEEEEEC
T ss_conf             9995168999851-688777899808


No 208
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=91.57  E-value=0.64  Score=25.18  Aligned_cols=80  Identities=19%  Similarity=0.316  Sum_probs=54.2

Q ss_pred             CCCCCC----HHHHHHHHH-CCEEEEE-CCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHHHCCCCEEEEECCCHH
Q ss_conf             376882----889999974-8909998-099899999999852148-852771132788987653123324786225207
Q gi|255764511|r   43 ATFGAG----GYSRSFCKM-GSNVIAL-DRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVPDKGVDGVVFDLGVSS  115 (341)
Q Consensus        43 ~TlG~G----GHS~~iL~~-~~~liai-DrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvSS  115 (341)
                      +-.|.|    +|..+++.. +.+|+|+ |.|+..+..+++.+++++ .....+...|++.++++...++|.|+.=.- ..
T Consensus        24 ~iiG~G~~g~~h~~~~~~~~~~~~vav~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~~iD~V~I~tp-~~  102 (444)
T 2ixa_A           24 AFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSSP-WE  102 (444)
T ss_dssp             EEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECCC-GG
T ss_pred             EEECCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCC-CH
T ss_conf             99948199999999997089948999976988899999999998289630002654366999963899988998588-27


Q ss_pred             HHHHHHHH
Q ss_conf             88876540
Q gi|255764511|r  116 MQIDCGDR  123 (341)
Q Consensus       116 ~Qld~~~R  123 (341)
                      .|.+-...
T Consensus       103 ~H~~~~~~  110 (444)
T 2ixa_A          103 WHHEHGVA  110 (444)
T ss_dssp             GHHHHHHH
T ss_pred             HHHHHHHH
T ss_conf             68999999


No 209
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=91.22  E-value=0.82  Score=24.50  Aligned_cols=81  Identities=11%  Similarity=0.108  Sum_probs=55.1

Q ss_pred             CCCEEEECCCCCCHHHHHHH-HH---CCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHHHHHH-H--------
Q ss_conf             88889983768828899999-74---890999809989999999985214--885277113278898765-3--------
Q gi|255764511|r   36 PGKVILDATFGAGGYSRSFC-KM---GSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQLQDYV-P--------  100 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS~~iL-~~---~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i~~~l-~--------  100 (341)
                      ....++.-.-+. |+|...+ +.   .++|+.+|.|++....|++.++..  .+++.++.++..+.-.-+ .        
T Consensus        60 ~ak~iLEiGT~~-GySal~lA~al~~~g~v~tie~~~~~~~~A~~~~~~ag~~~~I~~~~g~A~e~L~~L~~~~~~~~~~  138 (239)
T 2hnk_A           60 GAKRIIEIGTFT-GYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA  138 (239)
T ss_dssp             TCSEEEEECCTT-CHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred             CCCEEEEEECCC-CHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHCCCCCCCC
T ss_conf             997799972545-8899999971787886899945388899999999987996259999616899999988452333211


Q ss_pred             ------HCCCCEEEEECCCHHHH
Q ss_conf             ------12332478622520788
Q gi|255764511|r  101 ------DKGVDGVVFDLGVSSMQ  117 (341)
Q Consensus       101 ------~~~vdgIl~DLGvSS~Q  117 (341)
                            ...+|.|++|--=..+.
T Consensus       139 ~~~~~~~~~fD~IFiDa~K~~Y~  161 (239)
T 2hnk_A          139 SDFAFGPSSIDLFFLDADKENYP  161 (239)
T ss_dssp             TTTCCSTTCEEEEEECSCGGGHH
T ss_pred             CCCCCCCCCCCEEEEECCHHHHH
T ss_conf             00124677756899937877759


No 210
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45
Probab=90.52  E-value=0.42  Score=26.39  Aligned_cols=90  Identities=16%  Similarity=0.081  Sum_probs=55.3

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHH----HC----------------CEEEEECCCHHHHHHHHHHHHHCCC
Q ss_conf             098688660838888899837688288999997----48----------------9099980998999999998521488
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCK----MG----------------SNVIALDRDPFAVSCGQETMRDYKE   83 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~----~~----------------~~liaiDrD~~ai~~a~~~l~~~~~   83 (341)
                      +.+-+++.+.|.++..++|.+.|.||--.+..+    ..                ..++|+|.|+.+...|+-.+--.+-
T Consensus       157 Iv~~mv~ll~p~~~~~I~DPacGsG~fL~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~G~E~~~~~~~la~~nl~l~g~  236 (541)
T 2ar0_A          157 LIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDI  236 (541)
T ss_dssp             HHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
T ss_conf             99999986289988730465778560579999999984366211104678888876663020669999999864663456


Q ss_pred             C------EEEECCCHHHHHHHHHHCCCCEEEEECCCH
Q ss_conf             5------277113278898765312332478622520
Q gi|255764511|r   84 Q------FSLFQATFSQLQDYVPDKGVDGVVFDLGVS  114 (341)
Q Consensus        84 r------~~~~~~~F~~i~~~l~~~~vdgIl~DLGvS  114 (341)
                      .      ..+...++-.-+ .....++|.|+.+-=++
T Consensus       237 ~~~~~~~~~~~~~~~l~~d-~~~~~~fD~Vl~NPPfg  272 (541)
T 2ar0_A          237 EGNLDHGGAIRLGNTLGSD-GENLPKAHIVATNPPFG  272 (541)
T ss_dssp             CCBGGGTBSEEESCTTSHH-HHTSCCEEEEEECCCCT
T ss_pred             CCCCCCCCCHHCCCCHHHC-CCCCCCCCEEEECCCCC
T ss_conf             3011347502104504330-44443466687369976


No 211
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=90.46  E-value=0.67  Score=25.09  Aligned_cols=55  Identities=15%  Similarity=0.260  Sum_probs=42.5

Q ss_pred             HHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             86886608388888998376882889999974---89099980998999999998521
Q gi|255764511|r   26 EKVIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRD   80 (341)
Q Consensus        26 ~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~   80 (341)
                      .-|++.|.-..-..+||--.|.|.--..+|+.   ..+++|+|.|..++..+.++|..
T Consensus       711 ~aVl~iLr~~~akkVlDLGCGEGkLL~~LL~~~~~iE~IvGVDIS~~~Le~A~~rL~~  768 (950)
T 3htx_A          711 EYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHV  768 (950)
T ss_dssp             HHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHCCC
T ss_conf             9999999875998899738887099999862876600799997799999999874484


No 212
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus HB8} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=90.14  E-value=1  Score=23.88  Aligned_cols=95  Identities=16%  Similarity=0.216  Sum_probs=63.2

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH
Q ss_conf             33400986886608388888998376882889999974890999809989999999985214885277113278898765
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYV   99 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l   99 (341)
                      ..+..++++++..++.++ .+|+---|.|.=|+.+++.+.+|+|++.|+.......+++..+.  ...++..+...+ ..
T Consensus        31 ~d~~i~~~iv~~~~~~~~-~VlEIGpG~G~LT~~L~~~~~~v~avE~D~~l~~~L~~~~~~~~--~~~i~~~~~~~~-~~  106 (271)
T 3fut_A           31 VSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSGLP--VRLVFQDALLYP-WE  106 (271)
T ss_dssp             CCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTTSS--EEEEESCGGGSC-GG
T ss_pred             CCHHHHHHHHHHHCCCCC-CEEEECCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCC--HHHHHHHHHHHH-HH
T ss_conf             898999999996589999-88996797719999999608967999837067888875433301--033346555310-33


Q ss_pred             HHCCCCEEEEECC--CHHHHH
Q ss_conf             3123324786225--207888
Q gi|255764511|r  100 PDKGVDGVVFDLG--VSSMQI  118 (341)
Q Consensus       100 ~~~~vdgIl~DLG--vSS~Ql  118 (341)
                      ...+..-|+.+|=  +||.=+
T Consensus       107 ~~~~~~~vv~NLPY~Ist~ii  127 (271)
T 3fut_A          107 EVPQGSLLVANLPYHIATPLV  127 (271)
T ss_dssp             GSCTTEEEEEEECSSCCHHHH
T ss_pred             CCCCCEEEECCCCHHHHHHHH
T ss_conf             077642672365213267999


No 213
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=88.90  E-value=0.93  Score=24.16  Aligned_cols=96  Identities=17%  Similarity=0.286  Sum_probs=66.6

Q ss_pred             CCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHH----HHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCH
Q ss_conf             0783340098688660838888899837688288----999997489099980998999999998521488527711327
Q gi|255764511|r   17 IGDHVPVLLEKVIALLNPAPGKVILDATFGAGGY----SRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATF   92 (341)
Q Consensus        17 ~~~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGH----S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F   92 (341)
                      +....|-+-+.+++.++.+.--.+|  |-|.+|=    ++.+++.+.+|+..|+++++.+.+.+..+.++.++.++..+.
T Consensus        15 ~p~~~p~~~~~~mdlf~L~gKvalV--TGas~GIG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~g~~~~~~~~Dv   92 (279)
T 3ctm_A           15 LPTKAPTLSKNVLDLFSLKGKVASV--TGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNI   92 (279)
T ss_dssp             SSCCCCCCCSSGGGGGCCTTCEEEE--TTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCT
T ss_pred             CCCCCCCCCCCCCCCCCCCCCEEEE--ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf             9999999888873444889998999--48786999999999998799899996886889999999986599569999527


Q ss_pred             HH---HHHHHHH-----CCCCEEEEECCCH
Q ss_conf             88---9876531-----2332478622520
Q gi|255764511|r   93 SQ---LQDYVPD-----KGVDGVVFDLGVS  114 (341)
Q Consensus        93 ~~---i~~~l~~-----~~vdgIl~DLGvS  114 (341)
                      ++   +.+.+..     .++|.++-.-|++
T Consensus        93 s~~~~v~~~~~~~~~~~G~iDilVnnAG~~  122 (279)
T 3ctm_A           93 SDPKSVEETISQQEKDFGTIDVFVANAGVT  122 (279)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCSEEEECGGGS
T ss_pred             CCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             999999999999999849988999888543


No 214
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=88.13  E-value=1.4  Score=22.97  Aligned_cols=58  Identities=10%  Similarity=0.012  Sum_probs=32.8

Q ss_pred             CCCCCHHHHHHHHH----CCCCCCEEEECCCCCCHHHHHHHH-H-CCEEE---E-EC-CCHHHHHHHHHHH
Q ss_conf             83340098688660----838888899837688288999997-4-89099---9-80-9989999999985
Q gi|255764511|r   19 DHVPVLLEKVIALL----NPAPGKVILDATFGAGGYSRSFCK-M-GSNVI---A-LD-RDPFAVSCGQETM   78 (341)
Q Consensus        19 ~H~PVll~Evl~~l----~~~~~g~~iD~TlG~GGHS~~iL~-~-~~~li---a-iD-rD~~ai~~a~~~l   78 (341)
                      .=.+|+.+|+.++=    .+.+|+++..+++-.. + +..|. + ..+|+   + +. .+.+.+...-..+
T Consensus        16 GlE~~la~El~~lg~~~~~~~~g~V~f~~~~~~~-~-~~~l~sR~a~RV~~~l~~f~~~~~d~Ly~~~~~i   84 (385)
T 3ldu_A           16 GMEKMLAREITNLGYEIIKTEDGRITYKTDEFGI-A-KSNMWLRCAERVHLKIAEFEAKSFDELFENTKRI   84 (385)
T ss_dssp             TCHHHHHHHHHHTTCEEEEEETTEEEEEECTTHH-H-HHHHHCSSCSCCEEEEEEEECSSHHHHHHHHHTS
T ss_pred             CHHHHHHHHHHHCCCCCCEEECCEEEEEECHHHH-H-HHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCC
T ss_conf             5499999999965986318866689999789999-9-9998623298773101100059999999887429


No 215
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=88.05  E-value=0.37  Score=26.70  Aligned_cols=41  Identities=20%  Similarity=0.425  Sum_probs=33.1

Q ss_pred             HHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHC
Q ss_conf             78999999885202445338998725502389999998641
Q gi|255764511|r  226 EELAQGLRSAEKALKAGGLLIVVSFHSLEDRLVKKFFASRS  266 (341)
Q Consensus       226 ~~L~~~L~~~~~~L~~gGrl~VISFHSLEDRiVK~ff~~~~  266 (341)
                      ...+.+|..+..+|+|||++++..|..-++..++.++..+.
T Consensus       101 ~d~~~~l~ei~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~  141 (239)
T 1xxl_A          101 SDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLN  141 (239)
T ss_dssp             SCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHH
T ss_conf             68999999999980838299999878889989999999998


No 216
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=87.86  E-value=1.5  Score=22.86  Aligned_cols=79  Identities=19%  Similarity=0.209  Sum_probs=54.9

Q ss_pred             CCCEEEECCCCCCHHHH-HHHHH---CCEEEEECCCHHHHHHHHHHHHH--CCCCEEEECCCHHHH-HHHHHH---CCCC
Q ss_conf             88889983768828899-99974---89099980998999999998521--488527711327889-876531---2332
Q gi|255764511|r   36 PGKVILDATFGAGGYSR-SFCKM---GSNVIALDRDPFAVSCGQETMRD--YKEQFSLFQATFSQL-QDYVPD---KGVD  105 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS~-~iL~~---~~~liaiDrD~~ai~~a~~~l~~--~~~r~~~~~~~F~~i-~~~l~~---~~vd  105 (341)
                      +..++-=+| +. |+|. .+...   .++|+.+|.||+....|++.++.  +.+++.++.++..+. .++...   ..+|
T Consensus        73 ak~iLEiGT-~~-GyStl~lA~al~~~g~v~tiE~~~~~~~~A~~~~~~ag~~~~i~~~~g~a~e~l~~l~~~~~~~~fD  150 (232)
T 3cbg_A           73 AKQVLEIGV-FR-GYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD  150 (232)
T ss_dssp             CCEEEEECC-TT-SHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred             CCEEEEEEC-CC-CHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCCCE
T ss_conf             978999843-43-8999999985899858999976741489999999986998628999625899999997325677601


Q ss_pred             EEEEECCCHHH
Q ss_conf             47862252078
Q gi|255764511|r  106 GVVFDLGVSSM  116 (341)
Q Consensus       106 gIl~DLGvSS~  116 (341)
                      .|+.|---+.+
T Consensus       151 ~iFiDadK~~y  161 (232)
T 3cbg_A          151 LIFIDADKRNY  161 (232)
T ss_dssp             EEEECSCGGGH
T ss_pred             EEEEECCHHHH
T ss_conf             89960888889


No 217
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium}
Probab=87.65  E-value=1.5  Score=22.78  Aligned_cols=78  Identities=15%  Similarity=0.305  Sum_probs=50.9

Q ss_pred             HHHHHHHHCC-CCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH------HHH
Q ss_conf             9868866083-888889983768828899999748909998099899999999852148852771132788------987
Q gi|255764511|r   25 LEKVIALLNP-APGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ------LQD   97 (341)
Q Consensus        25 l~Evl~~l~~-~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~------i~~   97 (341)
                      |.|+.+-+.. +++..++|.--+-||-++.+.+..++++|+|..+-         .+. ..+.++++++.+      +..
T Consensus        13 L~EI~~kf~l~k~~~~vlDLg~aPGgw~q~~~~~~~~v~~vd~~~~---------~~~-~~v~~~~gD~~~~~~~~~~~~   82 (191)
T 3dou_A           13 LEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEM---------EEI-AGVRFIRCDIFKETIFDDIDR   82 (191)
T ss_dssp             HHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCC---------CCC-TTCEEEECCTTSSSHHHHHHH
T ss_pred             HHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCC---------CCC-CCEEEECCCCCCHHHHHHHHH
T ss_conf             9999998487679987998410298064876612662265504556---------566-781785255542568898888


Q ss_pred             HHH---HCCCCEEEEECC
Q ss_conf             653---123324786225
Q gi|255764511|r   98 YVP---DKGVDGVVFDLG  112 (341)
Q Consensus        98 ~l~---~~~vdgIl~DLG  112 (341)
                      +..   ..++|-|+.|.+
T Consensus        83 ~~~~~~~~~~DlVlSD~a  100 (191)
T 3dou_A           83 ALREEGIEKVDDVVSDAM  100 (191)
T ss_dssp             HHHHHTCSSEEEEEECCC
T ss_pred             HHHHCCCCCCCEEECCCC
T ss_conf             776504786688980464


No 218
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=86.68  E-value=0.49  Score=25.93  Aligned_cols=32  Identities=22%  Similarity=0.303  Sum_probs=27.0

Q ss_pred             HHHHHHHHHHHHHCCCCCCEEEEEEECCCHHH
Q ss_conf             57899999988520244533899872550238
Q gi|255764511|r  225 IEELAQGLRSAEKALKAGGLLIVVSFHSLEDR  256 (341)
Q Consensus       225 l~~L~~~L~~~~~~L~~gGrl~VISFHSLEDR  256 (341)
                      ++.+...|..+..+|+|||+++++||.+-+.|
T Consensus       135 ~~~~~~~l~e~~r~LkpgG~~i~~~~~~p~~r  166 (215)
T 2pxx_A          135 VHTVDQVLSEVSRVLVPGGRFISMTSAAPHFR  166 (215)
T ss_dssp             HHHHHHHHHHHHHHEEEEEEEEEEESCCHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEEECCCHHHH
T ss_conf             43199999999987735878999956983777


No 219
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=86.41  E-value=1.8  Score=22.35  Aligned_cols=56  Identities=21%  Similarity=0.325  Sum_probs=35.6

Q ss_pred             HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHH-----------------HCCEEEEECCCHHHHHHHHHHHHHC
Q ss_conf             98688660838888899837688288999997-----------------4890999809989999999985214
Q gi|255764511|r   25 LEKVIALLNPAPGKVILDATFGAGGYSRSFCK-----------------MGSNVIALDRDPFAVSCGQETMRDY   81 (341)
Q Consensus        25 l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~-----------------~~~~liaiDrD~~ai~~a~~~l~~~   81 (341)
                      .+=+++.+.|.++ .++|.+.|.||--.+..+                 ...+++|+|.|+.+...|+-.+--.
T Consensus       234 v~lmv~ll~p~~~-~I~DPacGsGgfLi~a~~~i~~~~~~~~~~~~~~~~~~~l~G~Ei~~~~~~la~~nm~l~  306 (544)
T 3khk_A          234 VTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIR  306 (544)
T ss_dssp             HHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHCCCCCCC-CEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCEEECCCCCHHHHHHHHHHHHHC
T ss_conf             9999862389988-370377776178999999999824522222022220110615038779999999889861


No 220
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, antibiotic biosynthesis, NADPH; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=85.82  E-value=1.9  Score=22.16  Aligned_cols=72  Identities=17%  Similarity=0.197  Sum_probs=52.1

Q ss_pred             CCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHH---HHH----H-CCCCEEEEEC
Q ss_conf             76882889----9999748909998099899999999852148852771132788987---653----1-2332478622
Q gi|255764511|r   44 TFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQD---YVP----D-KGVDGVVFDL  111 (341)
Q Consensus        44 TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~---~l~----~-~~vdgIl~DL  111 (341)
                      |-|.+|==    +.+++.+.+|+..||+++.+..+.+.++..+.++.++..+.++.+.   .+.    . .++|.++-+-
T Consensus        13 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnNA   92 (247)
T 2jah_A           13 TGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNA   92 (247)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf             38787899999999998799899998989999999999985499389999108999999999999999859970999899


Q ss_pred             CCHH
Q ss_conf             5207
Q gi|255764511|r  112 GVSS  115 (341)
Q Consensus       112 GvSS  115 (341)
                      |++.
T Consensus        93 G~~~   96 (247)
T 2jah_A           93 GIML   96 (247)
T ss_dssp             CCCC
T ss_pred             CCCC
T ss_conf             8788


No 221
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=85.65  E-value=1.9  Score=22.11  Aligned_cols=40  Identities=23%  Similarity=0.288  Sum_probs=22.8

Q ss_pred             EEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHH
Q ss_conf             99837688288999997489-09998099899999999852
Q gi|255764511|r   40 ILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMR   79 (341)
Q Consensus        40 ~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~   79 (341)
                      ++=.=.|.||=.+.+|+..+ +|..+|.||+.+..|++-+.
T Consensus       192 VLIIGGGdG~~~revlk~~~~~V~~VEID~~Vve~akk~~~  232 (364)
T 2qfm_A          192 VLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMR  232 (364)
T ss_dssp             EEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCC
T ss_pred             EEEEECCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
T ss_conf             99996994399999986178428997103899999998656


No 222
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme structure, ATP-binding, nucleotide-binding; HET: SAM; 1.70A {Yokose virus}
Probab=85.56  E-value=0.28  Score=27.48  Aligned_cols=88  Identities=16%  Similarity=0.109  Sum_probs=52.2

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH-C-CEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHH
Q ss_conf             0986886608388888998376882889999974-8-909998099899999999852148-852771132788987653
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM-G-SNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVP  100 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~-~-~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~  100 (341)
                      =|.|+++-+...+.|.+||-=.+.||-|...+.. + .+|+|+|.-...... .-+...+. +.+.+.. ... + ..+.
T Consensus        78 KL~~~~ekf~l~p~g~VVDLGaapGGWSqva~~~~g~~~V~gvDvG~~~~~~-p~~~~~~~~n~v~~~~-~~d-v-~~~~  153 (282)
T 3gcz_A           78 KLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEK-PIMRTTLGWNLIRFKD-KTD-V-FNME  153 (282)
T ss_dssp             HHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCC-CCCCCBTTGGGEEEEC-SCC-G-GGSC
T ss_pred             HHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCC-CCCCCCCCCCCEEEEE-CHH-H-HHCC
T ss_conf             9999998468575883887377898489999875388679999817876677-6102114776156542-000-2-3238


Q ss_pred             HCCCCEEEEECCCHH
Q ss_conf             123324786225207
Q gi|255764511|r  101 DKGVDGVVFDLGVSS  115 (341)
Q Consensus       101 ~~~vdgIl~DLGvSS  115 (341)
                      ...+|-|+-|+|-||
T Consensus       154 ~~~~D~VlcDia~sS  168 (282)
T 3gcz_A          154 VIPGDTLLCDIGESS  168 (282)
T ss_dssp             CCCCSEEEECCCCCC
T ss_pred             CCCCCEEEECCCCCC
T ss_conf             876898995787778


No 223
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=85.53  E-value=0.36  Score=26.79  Aligned_cols=88  Identities=14%  Similarity=0.062  Sum_probs=52.8

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHH-HC-CEEEEECCCHHHHHHHHHHH-HHCCCC-EEEECCCHHHHHHHH
Q ss_conf             098688660838888899837688288999997-48-90999809989999999985-214885-277113278898765
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCK-MG-SNVIALDRDPFAVSCGQETM-RDYKEQ-FSLFQATFSQLQDYV   99 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~-~~-~~liaiDrD~~ai~~a~~~l-~~~~~r-~~~~~~~F~~i~~~l   99 (341)
                      =|.++++-+...+.|.+||.=.|.||-|...+. .+ ..|+|+|.-..-.  ...+. ..+... +.+. ..  .....+
T Consensus        70 KL~~~~ekf~l~~~g~VVDLGas~GGwTqva~~~~ga~~V~avDvG~~~~--~~p~~~~~~~~n~~~~~-~~--~dv~~~  144 (276)
T 2wa2_A           70 KLAWIDERGGVELKGTVVDLGCGRGSWSYYAASQPNVREVKAYTLGTSGH--EKPRLVETFGWNLITFK-SK--VDVTKM  144 (276)
T ss_dssp             HHHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTSTTEEEEEEECCCCTTS--CCCCCCCCTTGGGEEEE-CS--CCGGGC
T ss_pred             HHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCC--CCCCCCCCCCCCHHHHH-HH--HHHHHC
T ss_conf             99999983797768848980778870999998764885799998278765--57533320035612100-33--322112


Q ss_pred             HHCCCCEEEEECCCHHH
Q ss_conf             31233247862252078
Q gi|255764511|r  100 PDKGVDGVVFDLGVSSM  116 (341)
Q Consensus       100 ~~~~vdgIl~DLGvSS~  116 (341)
                      ....+|-|+.|+|.||.
T Consensus       145 ~~~~~D~vvcDis~~S~  161 (276)
T 2wa2_A          145 EPFQADTVLCDIGESNP  161 (276)
T ss_dssp             CCCCCSEEEECCCCCCS
T ss_pred             CCCCCCEEEEECCCCCC
T ss_conf             89988889980544578


No 224
>3cvo_A Methyltransferase-like protein of unknown function; YP_167254.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=85.12  E-value=1.7  Score=22.46  Aligned_cols=72  Identities=18%  Similarity=0.270  Sum_probs=44.2

Q ss_pred             CCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH-CCEEEEECCCHHHHHHHHHHHH
Q ss_conf             987776432011011607833400986886608388888998376882889999974-8909998099899999999852
Q gi|255764511|r    1 MESKSCKTMSSAIHHTIGDHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM-GSNVIALDRDPFAVSCGQETMR   79 (341)
Q Consensus         1 ~~~~~~~~m~~~~~~~~~~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~-~~~liaiDrD~~ai~~a~~~l~   79 (341)
                      |.+++-++|.--+.+.-  -..-+|.+.++     ++.+++-  +|.||=|..+++. +.+++.+|-|++-....++.+.
T Consensus         2 ~~~~~~~~~~p~lt~~~--~e~~~l~~~l~-----~~~~iLE--~GSGgST~~~a~~~~~~I~SVE~d~~W~~~v~~~l~   72 (202)
T 3cvo_A            2 MDDQSGDQMRPELTMPP--AEAEALRMAYE-----EAEVILE--YGSGGSTVVAAELPGKHVTSVESDRAWARMMKAWLA   72 (202)
T ss_dssp             -------CCCCCCCSCH--HHHHHHHHHHH-----HCSEEEE--ESCSHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCH--HHHHHHHHHHC-----CCCEEEE--ECCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf             87667776687778998--89999999825-----7999999--689898999998179808996799999999999865


Q ss_pred             HC
Q ss_conf             14
Q gi|255764511|r   80 DY   81 (341)
Q Consensus        80 ~~   81 (341)
                      ..
T Consensus        73 ~~   74 (202)
T 3cvo_A           73 AN   74 (202)
T ss_dssp             HS
T ss_pred             HC
T ss_conf             41


No 225
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein structure initiative; HET: MSE; 1.53A {Streptococcus thermophilus lmg 18311}
Probab=84.24  E-value=1.7  Score=22.44  Aligned_cols=90  Identities=19%  Similarity=0.241  Sum_probs=62.5

Q ss_pred             HHHHHHHHHCCCCCC-EEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHCCCCEEE-ECCCHHHHHHH-H
Q ss_conf             098688660838888-899837688288999997489-0999809989999999985214885277-11327889876-5
Q gi|255764511|r   24 LLEKVIALLNPAPGK-VILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDYKEQFSL-FQATFSQLQDY-V   99 (341)
Q Consensus        24 ll~Evl~~l~~~~~g-~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~~~r~~~-~~~~F~~i~~~-l   99 (341)
                      =|...++.+.+...| +.+|----.||-|..+|+.+. +|||+|.-..-+.   ..|.. ..|+.. -..|+.++... +
T Consensus        72 KL~~al~~f~i~v~gkicLDIGaSTGGFTdvLLq~GA~~VyaVDVG~~QL~---~~Lr~-D~RV~~~E~tN~R~l~~~~~  147 (291)
T 3hp7_A           72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLV---WKLRQ-DDRVRSMEQYNFRYAEPVDF  147 (291)
T ss_dssp             HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSC---HHHHT-CTTEEEECSCCGGGCCGGGC
T ss_pred             HHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCC---HHHHC-CCCEEEECCCCHHHHHHHHH
T ss_conf             999999976976166699977878750999999849876999835722105---99865-99854312763866028661


Q ss_pred             HHCCCCEEEEECCCHHHH
Q ss_conf             312332478622520788
Q gi|255764511|r  100 PDKGVDGVVFDLGVSSMQ  117 (341)
Q Consensus       100 ~~~~vdgIl~DLGvSS~Q  117 (341)
                      .+..+|.|..|+-.-|..
T Consensus       148 ~~~~~Dliv~DvSFISl~  165 (291)
T 3hp7_A          148 TEGLPSFASIDVSFISLN  165 (291)
T ss_dssp             TTCCCSEEEECCSSSCGG
T ss_pred             CCCCCCEEEEECCHHHHH
T ss_conf             777877788502212199


No 226
>2edu_A Kinesin-like protein KIF22; kinesin-like DNA binding domain, helix turn helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.2.7
Probab=83.07  E-value=0.45  Score=26.20  Aligned_cols=45  Identities=27%  Similarity=0.455  Sum_probs=35.3

Q ss_pred             HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-CCCCCHHHHHHH
Q ss_conf             899986222578998999744630268899999999752-124321379999
Q gi|255764511|r  144 ASDVVNQANVKDLTRILGILGEEKQASRIAHAIVKRRQS-APFQTTQDLSSL  194 (341)
Q Consensus       144 A~eiln~~s~~~L~~i~~~yGee~~a~~IA~~Iv~~R~~-~~i~TT~eL~~i  194 (341)
                      --+.||+.+.++|..+ ..     -..+.|++||.+|+. ++|.+-.||.++
T Consensus        30 ~L~~iNtAs~~eL~~l-pg-----Ig~~~A~~Iv~~R~~~G~f~sledL~~v   75 (98)
T 2edu_A           30 ILDLLNEGSARDLRSL-QR-----IGPKKAQLIVGWRELHGPFSQVEDLERV   75 (98)
T ss_dssp             HHHHHHHSCHHHHHHS-TT-----CCHHHHHHHHHHHHHHCCCSSGGGGGGS
T ss_pred             HCCCCCCCCHHHHHHC-CC-----CCHHHHHHHHHHHHHCCCCCCHHHHHCC
T ss_conf             4100437899999647-99-----8999999999999985992889998448


No 227
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=81.55  E-value=0.63  Score=25.26  Aligned_cols=29  Identities=14%  Similarity=0.465  Sum_probs=24.4

Q ss_pred             CHHHHHHHHHHHHHCCCCCCEEEEEEECC
Q ss_conf             05789999998852024453389987255
Q gi|255764511|r  224 EIEELAQGLRSAEKALKAGGLLIVVSFHS  252 (341)
Q Consensus       224 El~~L~~~L~~~~~~L~~gGrl~VISFHS  252 (341)
                      .++..+.+|..+..+|+|||+++|+.|..
T Consensus        87 ~~~~~~~~l~~i~r~LkpgG~l~i~~~~~  115 (170)
T 3i9f_A           87 DMDDKQHVISEVKRILKDDGRVIIIDWRK  115 (170)
T ss_dssp             TCSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred             CCCCHHHHHHHHHHHCCCCEEEEEEEECC
T ss_conf             17799999999999758780999999075


No 228
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, human, structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=80.71  E-value=3  Score=20.84  Aligned_cols=78  Identities=18%  Similarity=0.231  Sum_probs=53.0

Q ss_pred             CCCEEEECCCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHH---HHH----H-CC
Q ss_conf             8888998376882889----9999748909998099899999999852148852771132788987---653----1-23
Q gi|255764511|r   36 PGKVILDATFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQD---YVP----D-KG  103 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~---~l~----~-~~  103 (341)
                      .|.+ +=-|-|.+|==    +.+++.+.+|+..|||++.++...+.++..+.++..+....++-++   .+.    . .+
T Consensus        30 ~GKv-alITGas~GIG~a~A~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           30 TGEI-VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             TTCE-EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCE-EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCC
T ss_conf             9988-999385769999999999987998999989999999999999854993899997279989999999999997299


Q ss_pred             CCEEEEECCCH
Q ss_conf             32478622520
Q gi|255764511|r  104 VDGVVFDLGVS  114 (341)
Q Consensus       104 vdgIl~DLGvS  114 (341)
                      +|.++-+-|++
T Consensus       109 iDilVnnAG~~  119 (272)
T 1yb1_A          109 VSILVNNAGVV  119 (272)
T ss_dssp             CSEEEECCCCC
T ss_pred             CEEEEECCCCC
T ss_conf             64999899777


No 229
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis ma-4680} PDB: 3go4_A*
Probab=80.33  E-value=3.1  Score=20.76  Aligned_cols=77  Identities=17%  Similarity=0.276  Sum_probs=56.0

Q ss_pred             HHHHHHHHCCCCC-CEEEECCCC--CCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHH
Q ss_conf             9868866083888-889983768--82889999974---8909998099899999999852148-852771132788987
Q gi|255764511|r   25 LEKVIALLNPAPG-KVILDATFG--AGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQD   97 (341)
Q Consensus        25 l~Evl~~l~~~~~-g~~iD~TlG--~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~   97 (341)
                      |.-.+.+|....| ..|||.--|  ..|+.-.+...   .++|+.+|.||.++..++.++.... .+..++...+.+.+.
T Consensus        66 l~RaVr~la~e~GirQfLDlGsGlPt~~n~heva~~~~P~arVvyvD~dp~vlaharalL~~~~~~~~~~v~aD~rdp~~  145 (277)
T 3giw_A           66 MNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPAS  145 (277)
T ss_dssp             HHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHH
T ss_pred             HHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHH
T ss_conf             99999999985798789994638898874999998748997699994978899999997337987738999576668345


Q ss_pred             HHHH
Q ss_conf             6531
Q gi|255764511|r   98 YVPD  101 (341)
Q Consensus        98 ~l~~  101 (341)
                      ++..
T Consensus       146 il~~  149 (277)
T 3giw_A          146 ILDA  149 (277)
T ss_dssp             HHTC
T ss_pred             HHCC
T ss_conf             4315


No 230
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=80.00  E-value=3.2  Score=20.70  Aligned_cols=71  Identities=14%  Similarity=0.168  Sum_probs=49.8

Q ss_pred             CCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCH---HHHHHHHHH-----CCCCEEEEEC
Q ss_conf             76882889----99997489099980998999999998521488527711327---889876531-----2332478622
Q gi|255764511|r   44 TFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATF---SQLQDYVPD-----KGVDGVVFDL  111 (341)
Q Consensus        44 TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F---~~i~~~l~~-----~~vdgIl~DL  111 (341)
                      |=|.+|=-    +.+++.+.+|+..||+++.+..+.+.+++.+.++.++..+.   +++.+.+..     ..+|.++-+-
T Consensus        13 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnA   92 (262)
T 1zem_A           13 TGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNA   92 (262)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf             38787899999999998799899998998999999999985299389998238999999999999999839997999898


Q ss_pred             CCH
Q ss_conf             520
Q gi|255764511|r  112 GVS  114 (341)
Q Consensus       112 GvS  114 (341)
                      |++
T Consensus        93 g~~   95 (262)
T 1zem_A           93 GYQ   95 (262)
T ss_dssp             CCC
T ss_pred             CCC
T ss_conf             766


No 231
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=79.84  E-value=3.2  Score=20.66  Aligned_cols=82  Identities=17%  Similarity=0.096  Sum_probs=52.4

Q ss_pred             CCCCCCEEEECCCCCCHHHHHHHHH-----CCEEEEECCCHHHHHHHHHHHHHCC---CCEEEECCCHHHHHH-HHHHCC
Q ss_conf             8388888998376882889999974-----8909998099899999999852148---852771132788987-653123
Q gi|255764511|r   33 NPAPGKVILDATFGAGGYSRSFCKM-----GSNVIALDRDPFAVSCGQETMRDYK---EQFSLFQATFSQLQD-YVPDKG  103 (341)
Q Consensus        33 ~~~~~g~~iD~TlG~GGHS~~iL~~-----~~~liaiDrD~~ai~~a~~~l~~~~---~r~~~~~~~F~~i~~-~l~~~~  103 (341)
                      .+.++..+.|-+.|.||=-.+..+.     ...++|.|.|+.+...|+-.+--.+   .++.+.++++-.-+. .....+
T Consensus       218 ~~~~~~~I~DPacGsGgfL~~a~~~~~~~~~~~~~G~e~~~~~~~la~~nl~l~g~~~~~~~i~~~d~l~~~~~~~~~~~  297 (542)
T 3lkd_A          218 EDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTN  297 (542)
T ss_dssp             TTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCC
T ss_pred             CCCCCCEEECCCCCCCHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCC
T ss_conf             56789868327788455889888877500555787442667999999998787246542220320565444443232320


Q ss_pred             CCEEEEECCCH
Q ss_conf             32478622520
Q gi|255764511|r  104 VDGVVFDLGVS  114 (341)
Q Consensus       104 vdgIl~DLGvS  114 (341)
                      +|.|+.+-=++
T Consensus       298 fD~Il~NPPfg  308 (542)
T 3lkd_A          298 FDGVLMNPPYS  308 (542)
T ss_dssp             BSEEEECCCTT
T ss_pred             EEEEEECCCCC
T ss_conf             00356348867


No 232
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=79.55  E-value=3.3  Score=20.61  Aligned_cols=85  Identities=15%  Similarity=0.120  Sum_probs=55.7

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC--EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH-HHHHHH
Q ss_conf             098688660838888899837688288999997489--09998099899999999852148852771132788-987653
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGS--NVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ-LQDYVP  100 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~--~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~-i~~~l~  100 (341)
                      +++..++.....+ |.++.|-++.|+-...+.+..+  +++|||.=...-      -....++..++.++|.+ +..++.
T Consensus        29 ~l~~a~~~~~~~~-G~vlE~Gv~~G~s~~~l~~~l~~r~i~gFDtF~g~~------~~~~~~~~~lv~G~~~eTlp~f~~  101 (174)
T 3iht_A           29 CLEHAIAQTAGLS-GPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASH------PDSTPPEAQLILGDIRETLPATLE  101 (174)
T ss_dssp             HHHHHHHHTTTCC-SCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCC------GGGCCCGGGEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCC-CCEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCC------CCCCCCCCEEEEECCHHHHHHHHH
T ss_conf             9999998626899-868998414764499999877998699997635789------989999747983071777799997


Q ss_pred             HC--CCCEEEEECCCHH
Q ss_conf             12--3324786225207
Q gi|255764511|r  101 DK--GVDGVVFDLGVSS  115 (341)
Q Consensus       101 ~~--~vdgIl~DLGvSS  115 (341)
                      ..  .+..+-+|+|.=+
T Consensus       102 ~~~~~iaflHiD~d~y~  118 (174)
T 3iht_A          102 RFGATASLVHADLGGHN  118 (174)
T ss_dssp             HHCSCEEEEEECCCCSC
T ss_pred             HCCCCEEEEEEECCCCC
T ss_conf             47885689997147575


No 233
>3imf_A Short chain dehydrogenase; structural genomics, infectious diseases, center for structural genomics of infectious diseases, oxidoreductase; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=79.38  E-value=3.3  Score=20.57  Aligned_cols=72  Identities=17%  Similarity=0.227  Sum_probs=51.5

Q ss_pred             CCCCCCHH----HHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHH---HHHHHH-----CCCCEEEEE
Q ss_conf             37688288----999997489099980998999999998521488527711327889---876531-----233247862
Q gi|255764511|r   43 ATFGAGGY----SRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQL---QDYVPD-----KGVDGVVFD  110 (341)
Q Consensus        43 ~TlG~GGH----S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i---~~~l~~-----~~vdgIl~D  110 (341)
                      -|-|.+|=    ++.+++.+.+|+..|++++.++.+.+.++.++.++.++..+.++-   .+.+..     ..+|.++-.
T Consensus        11 ITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnn   90 (257)
T 3imf_A           11 ITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINN   90 (257)
T ss_dssp             ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf             93898789999999999879989999798899999999998569948999930899999999999999983999799989


Q ss_pred             CCCH
Q ss_conf             2520
Q gi|255764511|r  111 LGVS  114 (341)
Q Consensus       111 LGvS  114 (341)
                      -|+.
T Consensus        91 AG~~   94 (257)
T 3imf_A           91 AAGN   94 (257)
T ss_dssp             CCCC
T ss_pred             CCCC
T ss_conf             9788


No 234
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferase; tRNA modification enzyme, guanine 26, N(2),N(2)- dimethyltransferase; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=79.14  E-value=3.4  Score=20.52  Aligned_cols=96  Identities=17%  Similarity=0.074  Sum_probs=65.1

Q ss_pred             CCCCEEEECCCCCCHHHHHHHH-HC-CEEEEECCCHHHHHHHHHHHHHCC----------------CCEEEECCCHHHHH
Q ss_conf             8888899837688288999997-48-909998099899999999852148----------------85277113278898
Q gi|255764511|r   35 APGKVILDATFGAGGYSRSFCK-MG-SNVIALDRDPFAVSCGQETMRDYK----------------EQFSLFQATFSQLQ   96 (341)
Q Consensus        35 ~~~g~~iD~TlG~GGHS~~iL~-~~-~~liaiDrD~~ai~~a~~~l~~~~----------------~r~~~~~~~F~~i~   96 (341)
                      ..+..++|+.-|.|.-+.-.+. .+ .+|++.|.|++|++.++++++-..                +++.+.+.....+.
T Consensus        46 ~~~~~iLD~~sasG~r~iRya~E~~~~~V~~nDi~~~A~~~i~~N~~~N~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~  125 (378)
T 2dul_A           46 LNPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM  125 (378)
T ss_dssp             HCCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH
T ss_pred             HCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHH
T ss_conf             29998999788722999999985899889999699899999999999708653343334332245543675211278898


Q ss_pred             HHHHHCCCCEEEEEC-CCHHHHHHHHHHCCCCCCCCCE
Q ss_conf             765312332478622-5207888765407344566410
Q gi|255764511|r   97 DYVPDKGVDGVVFDL-GVSSMQIDCGDRGFSFQKSGPL  133 (341)
Q Consensus        97 ~~l~~~~vdgIl~DL-GvSS~Qld~~~RGFSf~~dgpL  133 (341)
                      . -....+|.|-+|- |-+++-||.+-|.-  +..|-|
T Consensus       126 ~-~~~~~~DvIDiDPfGsp~pfldsA~~a~--~~gGll  160 (378)
T 2dul_A          126 A-ERHRYFHFIDLDPFGSPMEFLDTALRSA--KRRGIL  160 (378)
T ss_dssp             H-HSTTCEEEEEECCSSCCHHHHHHHHHHE--EEEEEE
T ss_pred             H-HCCCCCCEECCCCCCCHHHHHHHHHHHH--CCCCEE
T ss_conf             7-4478774331389998189999999970--558889


No 235
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=78.92  E-value=1.8  Score=22.36  Aligned_cols=26  Identities=19%  Similarity=0.317  Sum_probs=20.5

Q ss_pred             HHHHHHHHHHHHCCCCCCEEEEEEEC
Q ss_conf             78999999885202445338998725
Q gi|255764511|r  226 EELAQGLRSAEKALKAGGLLIVVSFH  251 (341)
Q Consensus       226 ~~L~~~L~~~~~~L~~gGrl~VISFH  251 (341)
                      ++-...|..+.+.|+|||+++|+-+-
T Consensus       263 ~~~~~iL~~~~~~L~pgG~lli~d~~  288 (348)
T 3lst_A          263 EDSVRILTNCRRVMPAHGRVLVIDAV  288 (348)
T ss_dssp             HHHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf             99999999999966999889999860


No 236
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=78.86  E-value=0.5  Score=25.89  Aligned_cols=88  Identities=20%  Similarity=0.226  Sum_probs=54.8

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH--CCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHH
Q ss_conf             0986886608388888998376882889999974--8909998099899999999852148-852771132788987653
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM--GSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVP  100 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~--~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~  100 (341)
                      =|.|+++-+...+.+.+||.-.+.||-|...+..  ..+|+|+|.-...... .-..+.++ +.+.+....  ++ ..++
T Consensus        61 KL~~~~~~~~~~~~~~vvDlG~~~Ggwt~~~~~~~~v~~V~gvdvG~~~~~~-P~~~~~~g~nlv~~~~~~--dv-~~l~  136 (269)
T 2px2_A           61 KLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEE-PMLMQSYGWNIVTMKSGV--DV-FYKP  136 (269)
T ss_dssp             HHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCC-CCCCCSTTGGGEEEECSC--CG-GGSC
T ss_pred             HHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCCCC-CCCHHHHCCCEEEEEECC--CH-HHCC
T ss_conf             9999998378565880898068898289999873377467999945776557-621132146504665500--02-1068


Q ss_pred             HCCCCEEEEECCCHH
Q ss_conf             123324786225207
Q gi|255764511|r  101 DKGVDGVVFDLGVSS  115 (341)
Q Consensus       101 ~~~vdgIl~DLGvSS  115 (341)
                      ...+|-|+-|.|-||
T Consensus       137 ~~~~D~vlcDi~esS  151 (269)
T 2px2_A          137 SEISDTLLCDIGESS  151 (269)
T ss_dssp             CCCCSEEEECCCCCC
T ss_pred             CCCCCEEEECCCCCC
T ss_conf             887898984687788


No 237
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=78.36  E-value=2.3  Score=21.66  Aligned_cols=134  Identities=17%  Similarity=0.104  Sum_probs=71.1

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH
Q ss_conf             09868866083888889983768828899999748--9099980998999999998521488527711327889876531
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMG--SNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPD  101 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~--~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~  101 (341)
                      =|.++.+-+...+.|.+||--.|.||-|.......  ..+.|+|.--+-.. .....+.++-.+.-.....+ + .+++.
T Consensus        62 KL~~~~e~~~~~~~g~vvDlg~~~Ggws~~~~~~~~v~~V~G~tlG~dghe-~P~~~~~~g~nii~~~~~~D-v-~~~~~  138 (265)
T 2oxt_A           62 KLAWMEERGYVELTGRVVDLGCGRGGWSYYAASRPHVMDVRAYTLGVGGHE-VPRITESYGWNIVKFKSRVD-I-HTLPV  138 (265)
T ss_dssp             HHHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCCSSCC-CCCCCCBTTGGGEEEECSCC-T-TTSCC
T ss_pred             HHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCCC-CCCCCCCCCCCEEEEECCCC-E-EECCC
T ss_conf             999999746766488288806788718999976337654677894577666-77322347865474442673-2-75599


Q ss_pred             CCCCEEEEECCCHHHHHHHHH-HCCCCCCCCCEECCCC-----CCCCCHHHHHHHCCHHH---HHHHHHHHCC
Q ss_conf             233247862252078887654-0734456641010435-----56841899986222578---9989997446
Q gi|255764511|r  102 KGVDGVVFDLGVSSMQIDCGD-RGFSFQKSGPLDMRMS-----CSGISASDVVNQANVKD---LTRILGILGE  165 (341)
Q Consensus       102 ~~vdgIl~DLGvSS~Qld~~~-RGFSf~~dgpLDMRmd-----~~~~tA~eiln~~s~~~---L~~i~~~yGe  165 (341)
                      ..+|-||.|.|.||..-+..+ |=.     ..|+|-.+     |.+--...++.-|..+.   |....+.||.
T Consensus       139 ~~~DtvlcDigess~~~~ve~~Rtl-----~Vlel~~~wl~~~p~g~Fv~KVl~py~p~vie~L~~lqr~~gg  206 (265)
T 2oxt_A          139 ERTDVIMCDVGESSPKWSVESERTI-----KILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKWGG  206 (265)
T ss_dssp             CCCSEEEECCCCCCSCHHHHHHHHH-----HHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHHCC
T ss_pred             CCCCEEEECCCCCCCCCCCCCCHHH-----HHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf             8688899678778997432210347-----9999999998268997399999158997899999999987099


No 238
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, ATP-binding, capsid protein, cleavage on PAIR of basic residues; HET: GTA SAH; 1.45A {Yellow fever virus 17D} PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=77.78  E-value=0.34  Score=26.95  Aligned_cols=43  Identities=14%  Similarity=0.063  Sum_probs=30.1

Q ss_pred             HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH------CCEEEEECCC
Q ss_conf             986886608388888998376882889999974------8909998099
Q gi|255764511|r   25 LEKVIALLNPAPGKVILDATFGAGGYSRSFCKM------GSNVIALDRD   67 (341)
Q Consensus        25 l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~------~~~liaiDrD   67 (341)
                      |.|+.+-...+|++.+||.=.|-||-|+...+.      .+.++|+|..
T Consensus        63 L~eI~ek~~lkp~~~VVDLGaAPGGWSQvaa~~~~v~~~~G~vigvDl~  111 (277)
T 3evf_A           63 LRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH  111 (277)
T ss_dssp             HHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC
T ss_pred             HHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEECCC
T ss_conf             9999980685779879992678868999999855546771399941287


No 239
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=77.61  E-value=0.4  Score=26.49  Aligned_cols=76  Identities=7%  Similarity=-0.114  Sum_probs=46.6

Q ss_pred             HHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHH--HHCCCCEE
Q ss_conf             6083888889983768828899999748909998099899999999852148-85277113278898765--31233247
Q gi|255764511|r   31 LLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYV--PDKGVDGV  107 (341)
Q Consensus        31 ~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l--~~~~vdgI  107 (341)
                      .+.|.|. -++-.-.|.||=.+.+|+...++...|.||+.+..|++.+..+. .|+.+....-.   .++  ....+|.|
T Consensus        68 ~~hp~pk-~VLiIGgG~G~~~re~lk~~~~v~~VEiD~~Vi~~a~~~fp~~~d~r~~~~~~D~~---~~l~~~~~~yDvI  143 (262)
T 2cmg_A           68 CTKKELK-EVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAK---QLLDLDIKKYDLI  143 (262)
T ss_dssp             TTSSCCC-EEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEES---SGGGSCCCCEEEE
T ss_pred             HCCCCCC-EEEEECCCCHHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHH---HHHHHCCCCCCEE
T ss_conf             5399867-79994599669999984589747999838999999998684223543360155799---9986154677889


Q ss_pred             EEE
Q ss_conf             862
Q gi|255764511|r  108 VFD  110 (341)
Q Consensus       108 l~D  110 (341)
                      +.|
T Consensus       144 i~D  146 (262)
T 2cmg_A          144 FCL  146 (262)
T ss_dssp             EES
T ss_pred             EEC
T ss_conf             988


No 240
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=77.33  E-value=3.8  Score=20.18  Aligned_cols=78  Identities=12%  Similarity=0.072  Sum_probs=52.3

Q ss_pred             CCCEEEECCCCCCHH----HHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHHH-----CC
Q ss_conf             888899837688288----99999748909998099899999999852148852771132788---9876531-----23
Q gi|255764511|r   36 PGKVILDATFGAGGY----SRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVPD-----KG  103 (341)
Q Consensus        36 ~~g~~iD~TlG~GGH----S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~~-----~~  103 (341)
                      .|.+. =-|-|.+|=    ++.+++.+.+|+..||+++.+....+.+++++.++.++..+.++   +...+..     .+
T Consensus        27 ~gKva-lITGas~GIG~aiA~~la~~Ga~Vv~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~  105 (270)
T 3ftp_A           27 DKQVA-IVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTCEE-EETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEE-EEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCC
T ss_conf             99989-99386858999999999986999999979889999999999965994699997369999999999999998399


Q ss_pred             CCEEEEECCCH
Q ss_conf             32478622520
Q gi|255764511|r  104 VDGVVFDLGVS  114 (341)
Q Consensus       104 vdgIl~DLGvS  114 (341)
                      +|.++-.-|+.
T Consensus       106 iDiLVnnAg~~  116 (270)
T 3ftp_A          106 LNVLVNNAGIT  116 (270)
T ss_dssp             CCEEEECCCCC
T ss_pred             CEEEEECCCCC
T ss_conf             61999878557


No 241
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=75.79  E-value=4.2  Score=19.92  Aligned_cols=71  Identities=18%  Similarity=0.154  Sum_probs=50.2

Q ss_pred             CCCCCHH----HHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHHH-----CCCCEEEEEC
Q ss_conf             7688288----99999748909998099899999999852148852771132788---9876531-----2332478622
Q gi|255764511|r   44 TFGAGGY----SRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVPD-----KGVDGVVFDL  111 (341)
Q Consensus        44 TlG~GGH----S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~~-----~~vdgIl~DL  111 (341)
                      |-|.+|=    ++.+++.+.+|+..||+++.++.+.+.++..+.++.++..+.++   +......     .++|..+-+-
T Consensus         8 TGas~GIG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnA   87 (256)
T 1geg_A            8 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNA   87 (256)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             16655899999999998799899997989999999999996399299999428999999999999999759997999899


Q ss_pred             CCH
Q ss_conf             520
Q gi|255764511|r  112 GVS  114 (341)
Q Consensus       112 GvS  114 (341)
                      |++
T Consensus        88 G~~   90 (256)
T 1geg_A           88 GVA   90 (256)
T ss_dssp             CCC
T ss_pred             CCC
T ss_conf             889


No 242
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structural genomics; 1.50A {Listeria monocytogenes str}
Probab=75.28  E-value=4.3  Score=19.83  Aligned_cols=61  Identities=13%  Similarity=0.052  Sum_probs=31.4

Q ss_pred             CCCCCCCCHHHHHHHH---HCCCCCCEEEECCCCCCHHHHHHHH-H-CCEEE---E-E-CCCHHHHHHHHHHH
Q ss_conf             6078334009868866---0838888899837688288999997-4-89099---9-8-09989999999985
Q gi|255764511|r   16 TIGDHVPVLLEKVIAL---LNPAPGKVILDATFGAGGYSRSFCK-M-GSNVI---A-L-DRDPFAVSCGQETM   78 (341)
Q Consensus        16 ~~~~H~PVll~Evl~~---l~~~~~g~~iD~TlG~GGHS~~iL~-~-~~~li---a-i-DrD~~ai~~a~~~l   78 (341)
                      +...=.+|+.+|+-+.   ..+..|+++..+++-.. + +..|. + ..+|+   + + -.+.+.+...-..+
T Consensus        21 ~~~GLE~~la~El~~lg~~~~~~~g~V~f~g~~~~~-y-~~~l~sR~a~RVl~~l~~f~a~~~~~Ly~~~~~i   91 (393)
T 3k0b_A           21 AASGLEAIVGKEVARLGYDPKVENGKVYFEGDLSAI-A-RANLWLRVADRVKIVVGVFKATTFDELFEKTKAL   91 (393)
T ss_dssp             CCTTCHHHHHHHHHHTTCCCEEETTEEEEEECHHHH-H-HHHHHCSSCSCEEEEEEEEECSSHHHHHHHHHTS
T ss_pred             ECCCHHHHHHHHHHHCCCCCEEECCEEEEEECHHHH-H-HHHHHCCCHHHHEEEEEEECCCCHHHHHHHHHCC
T ss_conf             087559999999997389778950379999899999-9-9998521577518772231169999999998719


No 243
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=74.93  E-value=4.4  Score=19.78  Aligned_cols=77  Identities=18%  Similarity=0.189  Sum_probs=53.1

Q ss_pred             CCCE-EEECCCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHH----H-C
Q ss_conf             8888-998376882889----9999748909998099899999999852148852771132788---987653----1-2
Q gi|255764511|r   36 PGKV-ILDATFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVP----D-K  102 (341)
Q Consensus        36 ~~g~-~iD~TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~----~-~  102 (341)
                      .|.+ +|  |=|.+|==    +.+++.+.+|+..|||++.+..+.+.+++++.++..+..+.++   +...+.    . .
T Consensus        21 ~gKVAlV--TGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~l~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~v~~~~~~~G   98 (277)
T 2rhc_B           21 DSEVALV--TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             TSCEEEE--ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEE--ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCC
T ss_conf             9978999--27675999999999998799999997998999999999985399289999207999999999999999759


Q ss_pred             CCCEEEEECCCH
Q ss_conf             332478622520
Q gi|255764511|r  103 GVDGVVFDLGVS  114 (341)
Q Consensus       103 ~vdgIl~DLGvS  114 (341)
                      ++|.++-+-|+.
T Consensus        99 ~iDiLVnnAG~~  110 (277)
T 2rhc_B           99 PVDVLVNNAGRP  110 (277)
T ss_dssp             SCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
T ss_conf             997999899999


No 244
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=74.36  E-value=4.6  Score=19.69  Aligned_cols=61  Identities=23%  Similarity=0.236  Sum_probs=39.5

Q ss_pred             CCCCHH-HHHH----HHHCCCCCCEEEECCCCCCHHH--HHHHHH--CCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             334009-8688----6608388888998376882889--999974--89099980998999999998521
Q gi|255764511|r   20 HVPVLL-EKVI----ALLNPAPGKVILDATFGAGGYS--RSFCKM--GSNVIALDRDPFAVSCGQETMRD   80 (341)
Q Consensus        20 H~PVll-~Evl----~~l~~~~~g~~iD~TlG~GGHS--~~iL~~--~~~liaiDrD~~ai~~a~~~l~~   80 (341)
                      -.||-| .|+.    .++.-+..-..-|+-.|+|+--  ..+|..  .-+|+|-|.|++++..|.++|.-
T Consensus        30 ~FPVRLAsEifqRal~~~~~~~p~tlwDPCCGsgYlLTvlgLLh~~~l~~v~aSDVd~~al~LA~~NL~L   99 (250)
T 1o9g_A           30 AFPVRLATEIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLAL   99 (250)
T ss_dssp             CCCHHHHHHHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             8518999999999998636888730430577720899999884305777777335887899998852211


No 245
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=69.87  E-value=5.8  Score=19.03  Aligned_cols=72  Identities=15%  Similarity=0.180  Sum_probs=47.7

Q ss_pred             CCCCCCHH----HHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHH----H-C-CCCEEEE
Q ss_conf             37688288----99999748909998099899999999852148852771132788---987653----1-2-3324786
Q gi|255764511|r   43 ATFGAGGY----SRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVP----D-K-GVDGVVF  109 (341)
Q Consensus        43 ~TlG~GGH----S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~----~-~-~vdgIl~  109 (341)
                      -|=|.+|=    ++.+++.+.+|+..||+++.+..+.+.++..+.++..+..+.++   +.+++.    . . .+|.++-
T Consensus        14 VTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~idilvn   93 (260)
T 2ae2_A           14 VTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVN   93 (260)
T ss_dssp             EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEE
T ss_pred             EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             94888889999999999869999999698899999999987249828999877899999999999999984999539998


Q ss_pred             ECCCH
Q ss_conf             22520
Q gi|255764511|r  110 DLGVS  114 (341)
Q Consensus       110 DLGvS  114 (341)
                      .-|+.
T Consensus        94 nAG~~   98 (260)
T 2ae2_A           94 NAGIV   98 (260)
T ss_dssp             CCCCC
T ss_pred             CCCCC
T ss_conf             99878


No 246
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, nucleus, phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=69.35  E-value=2.6  Score=21.26  Aligned_cols=26  Identities=38%  Similarity=0.538  Sum_probs=22.8

Q ss_pred             HHHHHHHHHHHCCCCCCEEEEEEECC
Q ss_conf             89999998852024453389987255
Q gi|255764511|r  227 ELAQGLRSAEKALKAGGLLIVVSFHS  252 (341)
Q Consensus       227 ~L~~~L~~~~~~L~~gGrl~VISFHS  252 (341)
                      ....+|..+..+|+|||+|.|...+|
T Consensus       129 d~~~~l~E~~RvLkpgG~l~i~e~~~  154 (215)
T 2zfu_A          129 NIRDFLEEANRVLKPGGLLKVAEVSS  154 (215)
T ss_dssp             CHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred             CHHHHHHHHHHHCCCCEEEEEEEECC
T ss_conf             98999999998538983999999410


No 247
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransferase, viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=69.05  E-value=0.79  Score=24.62  Aligned_cols=43  Identities=14%  Similarity=0.099  Sum_probs=34.3

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC------CEEEEECC
Q ss_conf             09868866083888889983768828899999748------90999809
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMG------SNVIALDR   66 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~------~~liaiDr   66 (341)
                      =|.|+.+-....|++.+||.=.|-||-|+.+.+..      +.++|+|.
T Consensus        69 KL~ei~ek~~l~p~g~VVDLG~aPGGWSQvaa~~~~v~~v~G~vvGiDl  117 (300)
T 3eld_A           69 KIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEG  117 (300)
T ss_dssp             HHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT
T ss_pred             HHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCC
T ss_conf             9999997067045883898377896499999875376776069980456


No 248
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A* 3evg_A*
Probab=68.87  E-value=3.3  Score=20.62  Aligned_cols=42  Identities=21%  Similarity=0.254  Sum_probs=25.9

Q ss_pred             HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH--CCEEEEECC
Q ss_conf             986886608388888998376882889999974--890999809
Q gi|255764511|r   25 LEKVIALLNPAPGKVILDATFGAGGYSRSFCKM--GSNVIALDR   66 (341)
Q Consensus        25 l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~--~~~liaiDr   66 (341)
                      |.|+.+-+-.+|+|.+||-=.|-||-|......  ...+.|+|.
T Consensus        71 L~ei~EK~~ikp~g~VVDLGcAPGGWSQvaa~~~~v~~V~G~~i  114 (305)
T 2p41_A           71 LRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTK  114 (305)
T ss_dssp             HHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTSTTEEEEEEECC
T ss_pred             HHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCEEEEEE
T ss_conf             99999734757698688737689838999986226662168994


No 249
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum ms-1}
Probab=68.66  E-value=4.7  Score=19.60  Aligned_cols=67  Identities=12%  Similarity=0.155  Sum_probs=40.1

Q ss_pred             HHHHHHHHHC-CEEEEE-CCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCC
Q ss_conf             8899999748-909998-09989999999985214885277113278898765312332478622520788876540734
Q gi|255764511|r   49 GYSRSFCKMG-SNVIAL-DRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVSSMQIDCGDRGFS  126 (341)
Q Consensus        49 GHS~~iL~~~-~~liai-DrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvSS~Qld~~~RGFS  126 (341)
                      .|..++.+.. -.|+|+ |+|++..       +.+...+.+    |.++++++....+|.|+.-.=.. .|++-...-..
T Consensus        24 ~h~~~~~~~~~~eiv~v~d~~~~~~-------~~~~~~~~~----~~~~~ell~~~~~D~V~I~tp~~-~H~~~~~~al~   91 (315)
T 3c1a_A           24 NYIRTIAGLPGAALVRLASSNPDNL-------ALVPPGCVI----ESDWRSVVSAPEVEAVIIATPPA-THAEITLAAIA   91 (315)
T ss_dssp             THHHHHHHCTTEEEEEEEESCHHHH-------TTCCTTCEE----ESSTHHHHTCTTCCEEEEESCGG-GHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCEEEEEECCCHHHH-------HHHCCCCCC----CCCHHHHHCCCCCCEEEECCCHH-HHHHHHHHHHH
T ss_conf             9999997189948999987999999-------975357973----59999995599999899928788-87999999996


Q ss_pred             C
Q ss_conf             4
Q gi|255764511|r  127 F  127 (341)
Q Consensus       127 f  127 (341)
                      .
T Consensus        92 ~   92 (315)
T 3c1a_A           92 S   92 (315)
T ss_dssp             T
T ss_pred             H
T ss_conf             1


No 250
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=67.49  E-value=3  Score=20.90  Aligned_cols=86  Identities=16%  Similarity=0.200  Sum_probs=49.7

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH--CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHH-----
Q ss_conf             0986886608388888998376882889999974--890999809989999999985214885277113278898-----
Q gi|255764511|r   24 LLEKVIALLNPAPGKVILDATFGAGGYSRSFCKM--GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQ-----   96 (341)
Q Consensus        24 ll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~--~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~-----   96 (341)
                      =|.|+.+-+...|.|.+||-=.|.||-|..-...  ...|.|+|.--+        +.+-+..+.-+..|+-.+.     
T Consensus        82 KL~~i~Ek~~l~p~G~VVDLGcapGGWSqvAa~~~~v~~V~G~tlG~d--------~~e~P~~v~t~g~niv~~k~~~dv  153 (321)
T 3lkz_A           82 KLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGP--------GHEEPQLVQSYGWNIVTMKSGVDV  153 (321)
T ss_dssp             HHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCST--------TSCCCCCCCBTTGGGEEEECSCCT
T ss_pred             HHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCEEEEEECCC--------CCCCCCCCCCCCCCCCCHHHCCCE
T ss_conf             999999805855088688747688718899875336663047994676--------553885320037773341111301


Q ss_pred             HHHHHCCCCEEEEECCCHHHH
Q ss_conf             765312332478622520788
Q gi|255764511|r   97 DYVPDKGVDGVVFDLGVSSMQ  117 (341)
Q Consensus        97 ~~l~~~~vdgIl~DLGvSS~Q  117 (341)
                      ..+.....|-||-|.|-||..
T Consensus       154 ~~~~~~~~DtvlcDigesS~~  174 (321)
T 3lkz_A          154 FYRPSECCDTLLCDIGESSSS  174 (321)
T ss_dssp             TSSCCCCCSEEEECCCCCCSC
T ss_pred             EECCCCCCCEEEECCCCCCCC
T ss_conf             354789988898437677998


No 251
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=67.47  E-value=2.3  Score=21.56  Aligned_cols=73  Identities=11%  Similarity=0.082  Sum_probs=43.4

Q ss_pred             CCCCCCHHHHHHHHH---CCEEEEE-----CCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCH
Q ss_conf             376882889999974---8909998-----09989999999985214885277113278898765312332478622520
Q gi|255764511|r   43 ATFGAGGYSRSFCKM---GSNVIAL-----DRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVS  114 (341)
Q Consensus        43 ~TlG~GGHS~~iL~~---~~~liai-----DrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvS  114 (341)
                      |-.|.|||....|+.   ..++.++     |+|.+.   +++..++|+-...    -|+++++++....+|+|+. .-.-
T Consensus         6 ~iiG~G~~~~~~l~~l~~~~~i~~v~~~~~~~~~~~---~~~~~~~~~~~~~----~y~~~~ell~~~~iD~V~i-~tp~   77 (337)
T 3ip3_A            6 CVIGSSGHFRYALEGLDEECSITGIAPGVPEEDLSK---LEKAISEMNIKPK----KYNNWWEMLEKEKPDILVI-NTVF   77 (337)
T ss_dssp             EEECSSSCHHHHHTTCCTTEEEEEEECSSTTCCCHH---HHHHHHTTTCCCE----ECSSHHHHHHHHCCSEEEE-CSSH
T ss_pred             EEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHH---HHHHHHHHCCCCE----EECCHHHHHCCCCCCEEEE-ECCC
T ss_conf             999259999999997321699899995778858999---9999998499970----4099999964899888999-5886


Q ss_pred             HHHHHHHHH
Q ss_conf             788876540
Q gi|255764511|r  115 SMQIDCGDR  123 (341)
Q Consensus       115 S~Qld~~~R  123 (341)
                      ..|.+-...
T Consensus        78 ~~H~~~~~~   86 (337)
T 3ip3_A           78 SLNGKILLE   86 (337)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
T ss_conf             167999999


No 252
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=66.97  E-value=6.6  Score=18.65  Aligned_cols=81  Identities=12%  Similarity=0.133  Sum_probs=50.7

Q ss_pred             CCCCCEEEECCCCCCHHH--HHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHH----HCCC
Q ss_conf             388888998376882889--9999748909998099899999999852148852771132788---987653----1233
Q gi|255764511|r   34 PAPGKVILDATFGAGGYS--RSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVP----DKGV  104 (341)
Q Consensus        34 ~~~~g~~iD~TlG~GGHS--~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~----~~~v  104 (341)
                      ++..-++|=+--++=|.+  +.+.+.+.+|+..||+++.+....+.+++.+.++.++....++   +..+..    ..++
T Consensus         5 ~knk~vlITGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~i~~~g~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   84 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL   84 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCE
T ss_conf             99998999758558999999999987999999989999999999999963983999977768999999888777642750


Q ss_pred             CEEEEECCCH
Q ss_conf             2478622520
Q gi|255764511|r  105 DGVVFDLGVS  114 (341)
Q Consensus       105 dgIl~DLGvS  114 (341)
                      |.++..-|.+
T Consensus        85 d~lv~nag~~   94 (252)
T 3h7a_A           85 EVTIFNVGAN   94 (252)
T ss_dssp             EEEEECCCCC
T ss_pred             EEEECCCEEC
T ss_conf             1230143215


No 253
>2yui_A Anamorsin; cytokine-induced apoptosis inhibitor 1, ciapin1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.14  E-value=2.9  Score=20.92  Aligned_cols=24  Identities=25%  Similarity=0.317  Sum_probs=19.3

Q ss_pred             HHHHHHHHHCCCCCCEEEEEEECC
Q ss_conf             999998852024453389987255
Q gi|255764511|r  229 AQGLRSAEKALKAGGLLIVVSFHS  252 (341)
Q Consensus       229 ~~~L~~~~~~L~~gGrl~VISFHS  252 (341)
                      ..+|..+.++|||||++++-.+..
T Consensus        84 ~~~l~e~~rvLKPgG~~~~~~~~~  107 (182)
T 2yui_A           84 AEILAEIARILRPGGCLFLKEPVE  107 (182)
T ss_dssp             HHHHHHHHHHBCTTSCCEEEEEEC
T ss_pred             HHHHHHHHHHHCCCEEEEEEECCC
T ss_conf             999999999706886999983265


No 254
>3ndi_A Methyltransferase; S-adenosylmethionine, kijanose, tetronitrose, tetradeoxysuga micromonospora chalcea, TCAB9, SUGA methylation; HET: SAM TMP; 1.50A {Micromonospora chalcea} PDB: 3ndj_A*
Probab=66.04  E-value=6.9  Score=18.53  Aligned_cols=62  Identities=15%  Similarity=0.237  Sum_probs=47.7

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHH
Q ss_conf             60783340098688660838888899837688288999997489099980998999999998
Q gi|255764511|r   16 TIGDHVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQET   77 (341)
Q Consensus        16 ~~~~H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~   77 (341)
                      ++..|.--+.+.+++.....+++.++|---|.|.--..+-+.+.+++|+|-.+.....+.+.
T Consensus        87 ~~~~~~~~~~~~l~~~~~~~~~~~ileIG~~dG~lL~~~~~~~~~~~Gidps~~~~~~~~~~  148 (416)
T 3ndi_A           87 VMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK  148 (416)
T ss_dssp             HHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTCEEEEECSCHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEECCCCCHHHHHCCC
T ss_conf             99999999999999874347787799835888705443342035324422562034443035


No 255
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=62.94  E-value=7.6  Score=18.24  Aligned_cols=64  Identities=22%  Similarity=0.214  Sum_probs=41.1

Q ss_pred             CCCCCHHH-HHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH-CCCCEEEEECCCH
Q ss_conf             76882889-99997489099980998999999998521488527711327889876531-2332478622520
Q gi|255764511|r   44 TFGAGGYS-RSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPD-KGVDGVVFDLGVS  114 (341)
Q Consensus        44 TlG~GGHS-~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~-~~vdgIl~DLGvS  114 (341)
                      |=+-|.+. +.+++++-+|+++.|+++.       +.....++.++..+..+.+.+... .++|.|+.-+|.+
T Consensus        13 tG~iG~~l~~~Ll~~g~~V~~l~R~~~~-------~~~~~~~~~~i~~D~~d~~~l~~~~~~~d~vi~~~~~~   78 (227)
T 3dhn_A           13 SGFVGSALLNEALNRGFEVTAVVRHPEK-------IKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG   78 (227)
T ss_dssp             CHHHHHHHHHHHHTTTCEEEEECSCGGG-------CCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEECCHHH-------CCCCCCCEEEEECCCCCHHHHHHHHCCCCCCEEECCCC
T ss_conf             9889999999999784989999868476-------22246623776135554666898860775110341455


No 256
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=62.80  E-value=7  Score=18.48  Aligned_cols=85  Identities=20%  Similarity=0.256  Sum_probs=50.6

Q ss_pred             CHHHHHHHHHCCCCCCEEEECCCCCCHHHHH---HHHH---CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHH
Q ss_conf             0098688660838888899837688288999---9974---890999809989999999985214885277113278898
Q gi|255764511|r   23 VLLEKVIALLNPAPGKVILDATFGAGGYSRS---FCKM---GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQ   96 (341)
Q Consensus        23 Vll~Evl~~l~~~~~g~~iD~TlG~GGHS~~---iL~~---~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~   96 (341)
                      +++.|.|.-+.  | .++|-.=.+.||=+..   +++.   .++++|+|.|+......    ....+++.++.++..+..
T Consensus        71 ~~~qeli~~~K--P-k~ILEIG~~~GgS~~~~a~~l~~~~~~~~I~~iDId~~~~~~~----~~~~~~I~~~~gds~d~~  143 (236)
T 2bm8_A           71 AVYHDMLWELR--P-RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIP----ASDMENITLHQGDCSDLT  143 (236)
T ss_dssp             HHHHHHHHHHC--C-SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCC----GGGCTTEEEEECCSSCSG
T ss_pred             HHHHHHHHHHC--C-CEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH----HCCCCCCEEEEECCCCHH
T ss_conf             99999999859--7-9899973880825999999997457884599733665665544----314666379992252188


Q ss_pred             --HHHHHCCCCEEEEECCCH
Q ss_conf             --765312332478622520
Q gi|255764511|r   97 --DYVPDKGVDGVVFDLGVS  114 (341)
Q Consensus        97 --~~l~~~~vdgIl~DLGvS  114 (341)
                        +.+.....+-|+.|=+=+
T Consensus       144 ~~~~l~~~~~dlIfID~~H~  163 (236)
T 2bm8_A          144 TFEHLREMAHPLIFIDNAHA  163 (236)
T ss_dssp             GGGGGSSSCSSEEEEESSCS
T ss_pred             HHHHHHHHCCCEEEEECCCC
T ss_conf             99999975586899938873


No 257
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium LT2}
Probab=61.71  E-value=8.2  Score=18.02  Aligned_cols=78  Identities=18%  Similarity=0.210  Sum_probs=45.1

Q ss_pred             HHHHHHHHHCC--EEEEE-CCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHHHH----H
Q ss_conf             88999997489--09998-09989999999985214885277113278898765312332478622520788876----5
Q gi|255764511|r   49 GYSRSFCKMGS--NVIAL-DRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVSSMQIDC----G  121 (341)
Q Consensus        49 GHS~~iL~~~~--~liai-DrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvSS~Qld~----~  121 (341)
                      .|...+++..+  +|+|+ |+|++......+   +|+-...    .|+++.+.+....+|+|+.=. ....|++-    -
T Consensus        37 ~h~~~~~~~~~~~~lvav~d~~~~~a~~~a~---~~~~~~~----~y~~~~ell~~~~iDaV~I~T-p~~~H~~~~~~al  108 (357)
T 3ec7_A           37 DHLRRLANTVSGVEVVAVCDIVAGRAQAALD---KYAIEAK----DYNDYHDLINDKDVEVVIITA-SNEAHADVAVAAL  108 (357)
T ss_dssp             HHHHHHHHTCTTEEEEEEECSSTTHHHHHHH---HHTCCCE----EESSHHHHHHCTTCCEEEECS-CGGGHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCEEEEEECCCHHHHHHHHH---HHCCCCC----CCCCHHHHHCCCCCCEEEECC-CCCCCHHHHHHHH
T ss_conf             9999998469997899997899999999999---8399983----119999996599988899889-8500004578898


Q ss_pred             HHCCCCCCCCCEE
Q ss_conf             4073445664101
Q gi|255764511|r  122 DRGFSFQKSGPLD  134 (341)
Q Consensus       122 ~RGFSf~~dgpLD  134 (341)
                      +.|.-.--+-||-
T Consensus       109 ~~GkhVl~EKPla  121 (357)
T 3ec7_A          109 NANKYVFCEKPLA  121 (357)
T ss_dssp             HTTCEEEEESSSC
T ss_pred             HCCCEEEECCCCH
T ss_conf             5177699758813


No 258
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=61.63  E-value=8.3  Score=18.02  Aligned_cols=66  Identities=17%  Similarity=0.194  Sum_probs=39.6

Q ss_pred             H-HHHHHHHCCEEEEECCCHHHHHHHH-----HHHHHCCCCEEEECCCHH---HHHHHHHHCCCCEEEEECCCHH
Q ss_conf             8-9999974890999809989999999-----985214885277113278---8987653123324786225207
Q gi|255764511|r   50 Y-SRSFCKMGSNVIALDRDPFAVSCGQ-----ETMRDYKEQFSLFQATFS---QLQDYVPDKGVDGVVFDLGVSS  115 (341)
Q Consensus        50 H-S~~iL~~~~~liaiDrD~~ai~~a~-----~~l~~~~~r~~~~~~~F~---~i~~~l~~~~vdgIl~DLGvSS  115 (341)
                      | .+.+++++..|+|+||.+.+.....     ........++.++..+..   .+.+++...++|.|+-=-|.++
T Consensus        16 ~L~~~Ll~~g~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~D~ViHlAa~~~   90 (372)
T 1db3_A           16 YLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSH   90 (372)
T ss_dssp             HHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEECCCCCT
T ss_pred             HHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHH
T ss_conf             999999978598999978986556566888875032048975999854789899999986149979998411311


No 259
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=61.04  E-value=8.5  Score=17.95  Aligned_cols=77  Identities=17%  Similarity=0.163  Sum_probs=50.6

Q ss_pred             CCCEEEECCCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHH---HHHHHHH----HC--
Q ss_conf             8888998376882889----999974890999809989999999985214885277113278---8987653----12--
Q gi|255764511|r   36 PGKVILDATFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFS---QLQDYVP----DK--  102 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~---~i~~~l~----~~--  102 (341)
                      .|.+.| -|=|.+|==    +.+++.+.+|+..|++++.++.+.+.++..+.++.++..+.+   ++.+.+.    ..  
T Consensus        20 ~GK~al-ITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~G   98 (273)
T 1ae1_A           20 KGTTAL-VTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TTCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC
T ss_conf             999899-9288869999999999987999999979989999999999832995489982589999999999999998289


Q ss_pred             CCCEEEEECCC
Q ss_conf             33247862252
Q gi|255764511|r  103 GVDGVVFDLGV  113 (341)
Q Consensus       103 ~vdgIl~DLGv  113 (341)
                      .+|.++-.-|+
T Consensus        99 ~idiLVnnAG~  109 (273)
T 1ae1_A           99 KLNILVNNAGV  109 (273)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
T ss_conf             98499989987


No 260
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=59.70  E-value=8.9  Score=17.80  Aligned_cols=69  Identities=17%  Similarity=0.186  Sum_probs=45.3

Q ss_pred             CCCCCCHH----HHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHH---HHH----H-CCCCEEEEE
Q ss_conf             37688288----99999748909998099899999999852148852771132788987---653----1-233247862
Q gi|255764511|r   43 ATFGAGGY----SRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQD---YVP----D-KGVDGVVFD  110 (341)
Q Consensus        43 ~TlG~GGH----S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~---~l~----~-~~vdgIl~D  110 (341)
                      -|-|.+|=    ++.+++.+.+|+..||+++.+....   +++++++.++....++.+.   .+.    . ..+|.++-+
T Consensus        10 ITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLvnN   86 (281)
T 3m1a_A           10 VTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV---AAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNN   86 (281)
T ss_dssp             ETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH---HHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred             EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf             9088869999999999987999999989999999999---9768957999973799999999999999982998499988


Q ss_pred             CCCH
Q ss_conf             2520
Q gi|255764511|r  111 LGVS  114 (341)
Q Consensus       111 LGvS  114 (341)
                      -|+.
T Consensus        87 AG~~   90 (281)
T 3m1a_A           87 AGRT   90 (281)
T ss_dssp             CCCE
T ss_pred             CCCC
T ss_conf             9788


No 261
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, joint center for structural genomics, JCSG; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=59.35  E-value=9  Score=17.76  Aligned_cols=29  Identities=7%  Similarity=0.151  Sum_probs=15.2

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             578998999744630268899999999752
Q gi|255764511|r  153 VKDLTRILGILGEEKQASRIAHAIVKRRQS  182 (341)
Q Consensus       153 ~~~L~~i~~~yGee~~a~~IA~~Iv~~R~~  182 (341)
                      .+++.++.....|+. |++.-.+++.+|-.
T Consensus       171 ~~~~~~~~~~L~D~~-Sr~~~~~~L~~rl~  199 (409)
T 2py6_A          171 IPAFQTLAQRLADDY-SVQTLYAVLNFHLT  199 (409)
T ss_dssp             HHHHHHHHHHCSSHH-HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCHH-HHHHHHHHHHHHHC
T ss_conf             999999998744387-89999999999872


No 262
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=59.22  E-value=9.1  Score=17.75  Aligned_cols=80  Identities=23%  Similarity=0.237  Sum_probs=54.4

Q ss_pred             CCCCCEEEECCCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHHH-----
Q ss_conf             388888998376882889----9999748909998099899999999852148852771132788---9876531-----
Q gi|255764511|r   34 PAPGKVILDATFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVPD-----  101 (341)
Q Consensus        34 ~~~~g~~iD~TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~~-----  101 (341)
                      +.+|.+.| -|=|.+|==    +.+++.+.+|+..||+++.++.+.+.+...+.++..+..+.++   +.+.+..     
T Consensus        11 ~L~gKval-VTGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (260)
T 2zat_A           11 PLENKVAL-VTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             TTTTCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf             88999799-92778789999999999879999999798899999999988349836899765799999999999999980


Q ss_pred             CCCCEEEEECCCH
Q ss_conf             2332478622520
Q gi|255764511|r  102 KGVDGVVFDLGVS  114 (341)
Q Consensus       102 ~~vdgIl~DLGvS  114 (341)
                      .++|.++.+-|+.
T Consensus        90 G~iDiLVnnAG~~  102 (260)
T 2zat_A           90 GGVDILVSNAAVN  102 (260)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
T ss_conf             9971999898555


No 263
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=58.41  E-value=9.4  Score=17.66  Aligned_cols=78  Identities=22%  Similarity=0.276  Sum_probs=53.3

Q ss_pred             CCCEEEECCCCCCHHHHHH----HHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHH---HHHHH----H-CC
Q ss_conf             8888998376882889999----97489099980998999999998521488527711327889---87653----1-23
Q gi|255764511|r   36 PGKVILDATFGAGGYSRSF----CKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQL---QDYVP----D-KG  103 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS~~i----L~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i---~~~l~----~-~~  103 (341)
                      .|.+ +=-|-|.+|==+++    ++.+.+|+..||+++.+..+.+.+++++.+..++..+.++-   ...+.    . ..
T Consensus        43 enKv-alITGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvtd~~~v~~~~~~~~~~~G~  121 (285)
T 2c07_A           43 ENKV-ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN  121 (285)
T ss_dssp             SSCE-EEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCE-EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCC
T ss_conf             9978-999088878999999999986999999979999999999999963994899983489999999999999997299


Q ss_pred             CCEEEEECCCH
Q ss_conf             32478622520
Q gi|255764511|r  104 VDGVVFDLGVS  114 (341)
Q Consensus       104 vdgIl~DLGvS  114 (341)
                      +|.++-.-|+.
T Consensus       122 iDiLVnNAG~~  132 (285)
T 2c07_A          122 VDILVNNAGIT  132 (285)
T ss_dssp             CCEEEECCCCC
T ss_pred             CEEEEECCCCC
T ss_conf             70999899766


No 264
>2duy_A Competence protein comea-related protein; helix-hairpin-helix, structural genomics, NPPSFA; 1.75A {Thermus thermophilus HB8} SCOP: a.60.2.7
Probab=57.69  E-value=1.4  Score=22.95  Aligned_cols=38  Identities=29%  Similarity=0.555  Sum_probs=30.3

Q ss_pred             HHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf             86222578998999744630268899999999752124321379999
Q gi|255764511|r  148 VNQANVKDLTRILGILGEEKQASRIAHAIVKRRQSAPFQTTQDLSSL  194 (341)
Q Consensus       148 ln~~s~~~L~~i~~~yGee~~a~~IA~~Iv~~R~~~~i~TT~eL~~i  194 (341)
                      ||+.+.++|..+-   |   -...+|++|+++|   +|.+-.||.++
T Consensus        21 iN~As~~eL~~lp---G---ig~~~A~~Iv~~R---~f~s~~dL~~v   58 (75)
T 2duy_A           21 LNEASLEELMALP---G---IGPVLARRIVEGR---PYARVEDLLKV   58 (75)
T ss_dssp             TTTCCHHHHTTST---T---CCHHHHHHHHHTC---CCSSGGGGGGS
T ss_pred             CCCCCHHHHHHCC---C---CCHHHHHHHHHCC---CCCCHHHHHHC
T ss_conf             7128799997778---9---8999999999858---98989999757


No 265
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=54.83  E-value=11  Score=17.28  Aligned_cols=80  Identities=14%  Similarity=0.119  Sum_probs=43.2

Q ss_pred             CEEEECCCCC-CHH-HHHHHHHCCEEEEECCCHHHHHHHHHHHHH--CCCCEEEECCCHHH---HHHHHHHCCCCEEEEE
Q ss_conf             8899837688-288-999997489099980998999999998521--48852771132788---9876531233247862
Q gi|255764511|r   38 KVILDATFGA-GGY-SRSFCKMGSNVIALDRDPFAVSCGQETMRD--YKEQFSLFQATFSQ---LQDYVPDKGVDGVVFD  110 (341)
Q Consensus        38 g~~iD~TlG~-GGH-S~~iL~~~~~liaiDrD~~ai~~a~~~l~~--~~~r~~~~~~~F~~---i~~~l~~~~vdgIl~D  110 (341)
                      .++|=|--|. |.| .+.+|+++-+|+|+||+..+...  .++..  ..+++.++..+..+   +...+....+++++.-
T Consensus        16 ~vLITGatGfIGs~l~~~Ll~~g~~V~~i~r~~~~~~~--~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~   93 (335)
T 1rpn_A           16 SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL   93 (335)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCH--HHHHHHCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCC
T ss_conf             49997588789999999999784989999899976517--7798733368948998215672321000223332222222


Q ss_pred             CCCHHHHHH
Q ss_conf             252078887
Q gi|255764511|r  111 LGVSSMQID  119 (341)
Q Consensus       111 LGvSS~Qld  119 (341)
                      .+.++.+..
T Consensus        94 a~~~~~~~~  102 (335)
T 1rpn_A           94 AAQSFVGAS  102 (335)
T ss_dssp             CSCCCHHHH
T ss_pred             CCCCCCCCC
T ss_conf             222223222


No 266
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=54.75  E-value=11  Score=17.28  Aligned_cols=79  Identities=11%  Similarity=0.161  Sum_probs=42.3

Q ss_pred             HHHHHHCCEEEEECCCHHHHHHHHHHHHHC-CCCEEEECCCHHH---HHHHHHHCCCCEEEEECCCHHH--HHHHHHHCC
Q ss_conf             999974890999809989999999985214-8852771132788---9876531233247862252078--887654073
Q gi|255764511|r   52 RSFCKMGSNVIALDRDPFAVSCGQETMRDY-KEQFSLFQATFSQ---LQDYVPDKGVDGVVFDLGVSSM--QIDCGDRGF  125 (341)
Q Consensus        52 ~~iL~~~~~liaiDrD~~ai~~a~~~l~~~-~~r~~~~~~~F~~---i~~~l~~~~vdgIl~DLGvSS~--Qld~~~RGF  125 (341)
                      +.+|+.+..|+|+|+-..+........+.+ ..++.+++.+..+   +.+.+...++|.|+-==++++.  -.+++...+
T Consensus        18 ~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~   97 (338)
T 1udb_A           18 VQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYY   97 (338)
T ss_dssp             HHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHH
T ss_pred             HHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCHHHHH
T ss_conf             99997849899997888763556677886157887699801789899999997569989998987666165676989999


Q ss_pred             CCCCC
Q ss_conf             44566
Q gi|255764511|r  126 SFQKS  130 (341)
Q Consensus       126 Sf~~d  130 (341)
                      --+..
T Consensus        98 ~~Nv~  102 (338)
T 1udb_A           98 DNNVN  102 (338)
T ss_dssp             HHHHH
T ss_pred             HHHHH
T ss_conf             99999


No 267
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genomics, NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus VF5} PDB: 2z95_A*
Probab=54.29  E-value=11  Score=17.23  Aligned_cols=76  Identities=13%  Similarity=0.193  Sum_probs=44.3

Q ss_pred             EEEECCCCCCH-H-HHHHHHHCCEEEEECCCHHHHHHHHHHHH--HCCCCEEEECCCHHH---HHHHHHHCCCCEEEEEC
Q ss_conf             89983768828-8-99999748909998099899999999852--148852771132788---98765312332478622
Q gi|255764511|r   39 VILDATFGAGG-Y-SRSFCKMGSNVIALDRDPFAVSCGQETMR--DYKEQFSLFQATFSQ---LQDYVPDKGVDGVVFDL  111 (341)
Q Consensus        39 ~~iD~TlG~GG-H-S~~iL~~~~~liaiDrD~~ai~~a~~~l~--~~~~r~~~~~~~F~~---i~~~l~~~~vdgIl~DL  111 (341)
                      ++|=|--|.=| | .+.+|+++..|+|+|+.+......  ++.  ....++.++..+..+   +...+...++|.|+.=.
T Consensus         6 ilVTG~tGfIGs~lv~~Ll~~g~~V~~~dr~~~~~~~~--~~~~~~~~~~~~~v~~Di~d~~~~~~~~~~~~~d~V~hlA   83 (345)
T 2z1m_A            6 ALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASW--RLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNLA   83 (345)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTH--HHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHH--HHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECC
T ss_conf             99989987899999999997839899998999764345--5887432689779980367857724556237971999735


Q ss_pred             CCHHH
Q ss_conf             52078
Q gi|255764511|r  112 GVSSM  116 (341)
Q Consensus       112 GvSS~  116 (341)
                      ++++.
T Consensus        84 a~~~~   88 (345)
T 2z1m_A           84 AQSFV   88 (345)
T ss_dssp             CCCCH
T ss_pred             CCCCC
T ss_conf             33761


No 268
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=54.18  E-value=11  Score=17.22  Aligned_cols=88  Identities=16%  Similarity=0.140  Sum_probs=46.6

Q ss_pred             CCCCCCHHHH-HHHH---HC--CEEEE-ECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCHH
Q ss_conf             3768828899-9997---48--90999-8099899999999852148852771132788987653123324786225207
Q gi|255764511|r   43 ATFGAGGYSR-SFCK---MG--SNVIA-LDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVSS  115 (341)
Q Consensus        43 ~TlG~GGHS~-~iL~---~~--~~lia-iDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvSS  115 (341)
                      +-.|.|+-.. .++.   ..  .+|+| .|+|++..+...+....-..++.    .|+++++++....+|.|+.-.--. 
T Consensus        87 ~iiG~G~~g~~~~~~~~~~~~~~~lvav~d~~~~~a~~~~~~~~~~~~~~~----~~~~~~~ll~~~~iD~V~i~tp~~-  161 (433)
T 1h6d_A           87 AIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIY----DYSNFDKIAKDPKIDAVYIILPNS-  161 (433)
T ss_dssp             EEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEE----CSSSGGGGGGCTTCCEEEECSCGG-
T ss_pred             EEEECHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCC----CCCCHHHHHCCCCCCEEEEECCHH-
T ss_conf             999081999999999997299978999992999999999997199834466----768999995699987899909879-


Q ss_pred             HHH----HHHHHCCCCCCCCCEEC
Q ss_conf             888----76540734456641010
Q gi|255764511|r  116 MQI----DCGDRGFSFQKSGPLDM  135 (341)
Q Consensus       116 ~Ql----d~~~RGFSf~~dgpLDM  135 (341)
                      .|.    +--+.|--.--+-|+-+
T Consensus       162 ~H~~~~~~al~aGkhv~~EKP~a~  185 (433)
T 1h6d_A          162 LHAEFAIRAFKAGKHVMCEKPMAT  185 (433)
T ss_dssp             GHHHHHHHHHHTTCEEEECSSCCS
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCC
T ss_conf             999999999987991999578412


No 269
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum 3D7}
Probab=53.52  E-value=11  Score=17.15  Aligned_cols=44  Identities=18%  Similarity=0.231  Sum_probs=32.3

Q ss_pred             HHHHHHHHCC-CCCCEEEECCCCCCHHHHHHHHHC----CEEEEECCCH
Q ss_conf             9868866083-888889983768828899999748----9099980998
Q gi|255764511|r   25 LEKVIALLNP-APGKVILDATFGAGGYSRSFCKMG----SNVIALDRDP   68 (341)
Q Consensus        25 l~Evl~~l~~-~~~g~~iD~TlG~GGHS~~iL~~~----~~liaiDrD~   68 (341)
                      |.|+.+-+.. +++..++|.=-+-||-++.+.+..    +.++++|..+
T Consensus        10 L~eI~~~~~l~~~~~~vvDLg~aPGgw~q~~~~~~~~~~~~~~~~~~~~   58 (201)
T 2plw_A           10 LIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKI   58 (201)
T ss_dssp             HHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred             HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCCC
T ss_conf             9999998382579987999478997799999998417888378613433


No 270
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=53.39  E-value=10  Score=17.44  Aligned_cols=78  Identities=10%  Similarity=0.171  Sum_probs=46.6

Q ss_pred             HHHHHHHH----HCCEEEEE-CCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH-
Q ss_conf             88999997----48909998-0998999999998521488527711327889876531233247862252078887654-
Q gi|255764511|r   49 GYSRSFCK----MGSNVIAL-DRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVSSMQIDCGD-  122 (341)
Q Consensus        49 GHS~~iL~----~~~~liai-DrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvSS~Qld~~~-  122 (341)
                      +|...++.    .+..|+|+ |+|++......+.   |+. .    ..|+++++++....||+|+.=. -.+.|.+-.. 
T Consensus        15 ~~~~~~~~~~~~~~~elvav~d~~~~~~~~~~~~---~~~-~----~~~~~~~ell~~~~iDaV~I~t-p~~~H~~~~~~   85 (336)
T 2p2s_A           15 NHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSL---FPS-V----PFAASAEQLITDASIDLIACAV-IPCDRAELALR   85 (336)
T ss_dssp             THHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHH---STT-C----CBCSCHHHHHTCTTCCEEEECS-CGGGHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH---CCC-C----CEECCHHHHHCCCCCCEEEEEC-CHHHHHHHHHH
T ss_conf             9999999886508978999989999999999987---799-8----3789999995599989999968-82778999999


Q ss_pred             ---HCCCCCCCCCEEC
Q ss_conf             ---0734456641010
Q gi|255764511|r  123 ---RGFSFQKSGPLDM  135 (341)
Q Consensus       123 ---RGFSf~~dgpLDM  135 (341)
                         .|.-.--+-||-+
T Consensus        86 al~~gk~Vl~EKPla~  101 (336)
T 2p2s_A           86 TLDAGKDFFTAKPPLT  101 (336)
T ss_dssp             HHHTTCEEEECSSCCS
T ss_pred             HHHCCCEEEECCCCCC
T ss_conf             9985990896278532


No 271
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp}
Probab=52.01  E-value=12  Score=17.00  Aligned_cols=71  Identities=14%  Similarity=0.210  Sum_probs=50.7

Q ss_pred             CCCCCHHHHH----HHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHHH-----CCCCEEEEEC
Q ss_conf             7688288999----99748909998099899999999852148852771132788---9876531-----2332478622
Q gi|255764511|r   44 TFGAGGYSRS----FCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVPD-----KGVDGVVFDL  111 (341)
Q Consensus        44 TlG~GGHS~~----iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~~-----~~vdgIl~DL  111 (341)
                      |-|.+|==++    +++.+.+|+..||+++.++.+.+.+++++.++.++..+..+   +.+++..     .++|.++.+-
T Consensus        11 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnA   90 (247)
T 3lyl_A           11 TGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNA   90 (247)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             28886899999999998699999997988999999999985499589999107999999999999999729976999877


Q ss_pred             CCH
Q ss_conf             520
Q gi|255764511|r  112 GVS  114 (341)
Q Consensus       112 GvS  114 (341)
                      |+.
T Consensus        91 g~~   93 (247)
T 3lyl_A           91 GIT   93 (247)
T ss_dssp             CCC
T ss_pred             CCC
T ss_conf             457


No 272
>3k6g_A Telomeric repeat-binding factor 2-interacting Pro; helix, chromosomal protein, nucleus, phosphoprotein, telomer cycle, DNA-binding, protein binding; 1.95A {Homo sapiens}
Probab=51.11  E-value=7  Score=18.49  Aligned_cols=30  Identities=13%  Similarity=0.193  Sum_probs=25.3

Q ss_pred             HHHHHHCCHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             999862225789989997446302688999
Q gi|255764511|r  145 SDVVNQANVKDLTRILGILGEEKQASRIAH  174 (341)
Q Consensus       145 ~eiln~~s~~~L~~i~~~yGee~~a~~IA~  174 (341)
                      ..-|..-++..+.+++.+||++.-|||||=
T Consensus        66 DldLqkdD~~~r~~Li~KfGa~nVArRiaF   95 (111)
T 3k6g_A           66 DIDLQKDDEDTREALVKKFGAQNVARRIEF   95 (111)
T ss_dssp             HHHHTCCCHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             HHHHHCCCHHHHHHHHHHHCCHHHHHHHHH
T ss_conf             687763899999999999750436777553


No 273
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=50.73  E-value=12  Score=16.87  Aligned_cols=72  Identities=18%  Similarity=0.177  Sum_probs=51.6

Q ss_pred             CCCCCCHHHHH----HHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHHH-----CCCCEEEEE
Q ss_conf             37688288999----99748909998099899999999852148852771132788---9876531-----233247862
Q gi|255764511|r   43 ATFGAGGYSRS----FCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVPD-----KGVDGVVFD  110 (341)
Q Consensus        43 ~TlG~GGHS~~----iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~~-----~~vdgIl~D  110 (341)
                      -|-|.+|=-.+    +++.+.+|+..||+++.+....+.+++++.++.++..+.++   +.+.+..     ..+|.++-+
T Consensus        16 ITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnn   95 (255)
T 1fmc_A           16 ITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNN   95 (255)
T ss_dssp             ETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred             EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf             93897589999999999879989999799899999999999639938999922899999999999999974999899989


Q ss_pred             CCCH
Q ss_conf             2520
Q gi|255764511|r  111 LGVS  114 (341)
Q Consensus       111 LGvS  114 (341)
                      -|++
T Consensus        96 AG~~   99 (255)
T 1fmc_A           96 AGGG   99 (255)
T ss_dssp             CCCC
T ss_pred             CCCC
T ss_conf             9999


No 274
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=50.70  E-value=12  Score=16.87  Aligned_cols=77  Identities=18%  Similarity=0.226  Sum_probs=53.3

Q ss_pred             CCCE-EEECCCCCCHHHH----HHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHHH-----C
Q ss_conf             8888-9983768828899----999748909998099899999999852148852771132788---9876531-----2
Q gi|255764511|r   36 PGKV-ILDATFGAGGYSR----SFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVPD-----K  102 (341)
Q Consensus        36 ~~g~-~iD~TlG~GGHS~----~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~~-----~  102 (341)
                      +|.+ +|  |-|.+|==+    .+++.+.+|+..|++++.++...+.+++++.++.++..+.++   +.+++..     .
T Consensus        11 ~gKvalI--TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (256)
T 3gaf_A           11 NDAVAIV--TGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG   88 (256)
T ss_dssp             TTCEEEE--CSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEE--ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf             9998999--48676899999999998799999997988999999999996499389998018999999999999999749


Q ss_pred             CCCEEEEECCCH
Q ss_conf             332478622520
Q gi|255764511|r  103 GVDGVVFDLGVS  114 (341)
Q Consensus       103 ~vdgIl~DLGvS  114 (341)
                      ++|.++-.=|+.
T Consensus        89 ~iDiLVnnAG~~  100 (256)
T 3gaf_A           89 KITVLVNNAGGG  100 (256)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
T ss_conf             998999899999


No 275
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=49.40  E-value=12  Score=16.88  Aligned_cols=85  Identities=11%  Similarity=0.114  Sum_probs=44.5

Q ss_pred             HHHCCC-CCCEEEECCCCCCH-H-HHHHHHHCCEEEEECCCHHHHHH------HHHHHHHCCCCEEEECCCH---HHHHH
Q ss_conf             660838-88889983768828-8-99999748909998099899999------9998521488527711327---88987
Q gi|255764511|r   30 ALLNPA-PGKVILDATFGAGG-Y-SRSFCKMGSNVIALDRDPFAVSC------GQETMRDYKEQFSLFQATF---SQLQD   97 (341)
Q Consensus        30 ~~l~~~-~~g~~iD~TlG~GG-H-S~~iL~~~~~liaiDrD~~ai~~------a~~~l~~~~~r~~~~~~~F---~~i~~   97 (341)
                      .++... +.-++|=+--|.=| | ++.+|+++..|+|+||..++...      .+.......+++.++.++.   +.+..
T Consensus        17 ~~~~~~Mkk~~LITGatGfIGs~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~   96 (375)
T 1t2a_A           17 KYFQGHMRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVK   96 (375)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHH
T ss_pred             HHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCHHHHCCCCCEEEECCCCCHHHHHH
T ss_conf             02440798769996086289999999999784989999798755551238887546465424780899841578688788


Q ss_pred             HHHHCCCCEEEEECCCH
Q ss_conf             65312332478622520
Q gi|255764511|r   98 YVPDKGVDGVVFDLGVS  114 (341)
Q Consensus        98 ~l~~~~vdgIl~DLGvS  114 (341)
                      .+...+.+.|+.=.+.+
T Consensus        97 ~~~~~~~~~v~~~aa~~  113 (375)
T 1t2a_A           97 IINEVKPTEIYNLGAQS  113 (375)
T ss_dssp             HHHHHCCSEEEECCSCC
T ss_pred             HHHHCCCCCEEEECCCC
T ss_conf             88623874013200125


No 276
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=49.34  E-value=13  Score=16.73  Aligned_cols=68  Identities=7%  Similarity=0.114  Sum_probs=47.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCH----HHHHHHHHHCC
Q ss_conf             890999809989999999985214885277113278898765312332478622520----78887654073
Q gi|255764511|r   58 GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVS----SMQIDCGDRGF  125 (341)
Q Consensus        58 ~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvS----S~Qld~~~RGF  125 (341)
                      +-+|.-+|-|+.........|+.++-.+....+.-..+..+.....+|.|++|+.+.    -.++-..-|.+
T Consensus         5 ~~rILiVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eAl~~l~~~~~~dlillD~~mp~g~dG~e~~~~ir~~   76 (140)
T 3h5i_A            5 DKKILIVEDSKFQAKTIANILNKYGYTVEIALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQI   76 (140)
T ss_dssp             -CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHH
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHC
T ss_conf             999999959899999999999987999999898999999998469998999726653357899999999856


No 277
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=47.90  E-value=14  Score=16.59  Aligned_cols=67  Identities=22%  Similarity=0.146  Sum_probs=42.9

Q ss_pred             EECCCCCCHH-HHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH-CCCCEEEEECCC
Q ss_conf             9837688288-999997489099980998999999998521488527711327889876531-233247862252
Q gi|255764511|r   41 LDATFGAGGY-SRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPD-KGVDGVVFDLGV  113 (341)
Q Consensus        41 iD~TlG~GGH-S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~-~~vdgIl~DLGv  113 (341)
                      +=||-+-|.| .+.+|+++-+|+++.||+..      ........+.++..++.+-+.+... .++|.|+.-+|.
T Consensus         9 ~GatG~iG~~l~~~ll~~g~~V~~~~R~~~~------~~~~~~~~~~~v~~D~~d~~~l~~a~~~~d~Vi~~~g~   77 (206)
T 1hdo_A            9 FGATGQTGLTTLAQAVQAGYEVTVLVRDSSR------LPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT   77 (206)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCGGG------SCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHH------CCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEECC
T ss_conf             9998689999999999786989999848365------65433566158960243367899997699799997136


No 278
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A*
Probab=47.55  E-value=14  Score=16.55  Aligned_cols=78  Identities=19%  Similarity=0.253  Sum_probs=53.9

Q ss_pred             CCCEEEECCCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHH----H-CC
Q ss_conf             8888998376882889----9999748909998099899999999852148852771132788---987653----1-23
Q gi|255764511|r   36 PGKVILDATFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVP----D-KG  103 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~----~-~~  103 (341)
                      .|.+.| -|=|.+|==    +.+.+.+.+|+..|++++.++.+.+.++..+.++.++..+.++   +.+.+.    . .+
T Consensus        33 ~gK~al-VTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~  111 (291)
T 3cxt_A           33 KGKIAL-VTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEVGI  111 (291)
T ss_dssp             TTCEEE-EETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCC
T ss_conf             998799-9287859999999999987998999979999999999999854995899996289999999999999997699


Q ss_pred             CCEEEEECCCH
Q ss_conf             32478622520
Q gi|255764511|r  104 VDGVVFDLGVS  114 (341)
Q Consensus       104 vdgIl~DLGvS  114 (341)
                      +|.++-.-|+.
T Consensus       112 iDilVnnAG~~  122 (291)
T 3cxt_A          112 IDILVNNAGII  122 (291)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
T ss_conf             86899899989


No 279
>2b4a_A BH3024; 10175646, structural genomics, joint center for structural genomics, JCSG, protein structure initiative PSI, unknown function; 2.42A {Bacillus halodurans c-125} SCOP: c.23.1.1
Probab=45.69  E-value=15  Score=16.37  Aligned_cols=65  Identities=9%  Similarity=0.010  Sum_probs=49.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCC---HHHHHHHHHH
Q ss_conf             9099980998999999998521488527711327889876531233247862252---0788876540
Q gi|255764511|r   59 SNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGV---SSMQIDCGDR  123 (341)
Q Consensus        59 ~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGv---SS~Qld~~~R  123 (341)
                      -+|.-+|=|+.........|+..+-.+....+...-+..+.....+|-|+.|++.   |-.++-..=|
T Consensus        16 ~rILvVDDd~~~~~~l~~~L~~~G~~v~~~~~g~~al~~l~~~~~~DlvilD~~lP~~dG~~l~~~ir   83 (138)
T 2b4a_A           16 FRVTLVEDEPSHATLIQYHLNQLGAEVTVHPSGSAFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVK   83 (138)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHT
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH
T ss_conf             88999969999999999999985997998099999999998369998899858889988899999999


No 280
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=45.65  E-value=15  Score=16.37  Aligned_cols=20  Identities=5%  Similarity=0.147  Sum_probs=12.1

Q ss_pred             HHHHHHHCCHHHHHHHHHHH
Q ss_conf             89998622257899899974
Q gi|255764511|r  144 ASDVVNQANVKDLTRILGIL  163 (341)
Q Consensus       144 A~eiln~~s~~~L~~i~~~y  163 (341)
                      ..++.+..+.+.++.++-+.
T Consensus       514 ~~~v~~~~D~ea~~~llar~  533 (769)
T 2nut_A          514 IQNIAASFDQEAAAILMARL  533 (769)
T ss_dssp             HHHHHHTBCHHHHHHHHHHH
T ss_pred             HHHHHHHCCHHHHHHHHHHH
T ss_conf             99999724999999999999


No 281
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=44.74  E-value=15  Score=16.28  Aligned_cols=73  Identities=16%  Similarity=0.189  Sum_probs=49.7

Q ss_pred             CCCCCCHH----HHHHHHHCCEEEEECCCHHHHHHHHHHHHHC---CCCEEEECCCHHH---HHHHHHH-----CCCCEE
Q ss_conf             37688288----9999974890999809989999999985214---8852771132788---9876531-----233247
Q gi|255764511|r   43 ATFGAGGY----SRSFCKMGSNVIALDRDPFAVSCGQETMRDY---KEQFSLFQATFSQ---LQDYVPD-----KGVDGV  107 (341)
Q Consensus        43 ~TlG~GGH----S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~---~~r~~~~~~~F~~---i~~~l~~-----~~vdgI  107 (341)
                      -|=|.+|=    ++.+++.+.+|+..||+++.++.+.+.+.+.   +.++.++..+.++   +.+.+..     ..+|.+
T Consensus        11 ITGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDil   90 (280)
T 1xkq_A           11 ITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVL   90 (280)
T ss_dssp             ETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEE
T ss_conf             93768699999999999879989999898899999999999658888857999902899999999999999975999799


Q ss_pred             EEECCCHH
Q ss_conf             86225207
Q gi|255764511|r  108 VFDLGVSS  115 (341)
Q Consensus       108 l~DLGvSS  115 (341)
                      +-.-|++.
T Consensus        91 VnnAG~~~   98 (280)
T 1xkq_A           91 VNNAGAAI   98 (280)
T ss_dssp             EECCCCCC
T ss_pred             EECCCCCC
T ss_conf             98998788


No 282
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=44.28  E-value=16  Score=16.23  Aligned_cols=77  Identities=22%  Similarity=0.310  Sum_probs=50.6

Q ss_pred             CCCEEEECCCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHHH-----CC
Q ss_conf             8888998376882889----9999748909998099899999999852148852771132788---9876531-----23
Q gi|255764511|r   36 PGKVILDATFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVPD-----KG  103 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~~-----~~  103 (341)
                      .|.+.| -|=|.+|==    +.+++.+.+|+..||+++.++.+.+.+...+ ++..+..+.++   +++....     ..
T Consensus        28 ~gKval-VTGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  105 (276)
T 2b4q_A           28 AGRIAL-VTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELSAR  105 (276)
T ss_dssp             TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf             998799-92888789999999999869989999798899999999975049-8799990289999999999999997399


Q ss_pred             CCEEEEECCCH
Q ss_conf             32478622520
Q gi|255764511|r  104 VDGVVFDLGVS  114 (341)
Q Consensus       104 vdgIl~DLGvS  114 (341)
                      +|.++..-|+.
T Consensus       106 iD~lVnnAG~~  116 (276)
T 2b4q_A          106 LDILVNNAGTS  116 (276)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCCC
T ss_conf             61999899668


No 283
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=42.97  E-value=16  Score=16.10  Aligned_cols=66  Identities=9%  Similarity=-0.018  Sum_probs=47.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCH---HHHHHHHHHC
Q ss_conf             890999809989999999985214885277113278898765312332478622520---7888765407
Q gi|255764511|r   58 GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVS---SMQIDCGDRG  124 (341)
Q Consensus        58 ~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvS---S~Qld~~~RG  124 (341)
                      .++|+-+|-|+.........|+.++-++....+.-.-+ +.+....+|.|++|+.+.   -.++-..=|.
T Consensus         1 a~rILiVdd~~~~~~~~~~~L~~~g~~v~~a~~~~~al-~~l~~~~pdlvllD~~lp~~~G~~l~~~lr~   69 (119)
T 2j48_A            1 AGHILLLEEEDEAATVVCEMLTAAGFKVIWLVDGSTAL-DQLDLLQPIVILMAWPPPDQSCLLLLQHLRE   69 (119)
T ss_dssp             CCEEEEECCCHHHHHHHHHHHHHTTCEEEEESCHHHHH-HHHHHHCCSEEEEECSTTCCTHHHHHHHHHH
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHH-HHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
T ss_conf             99899997999999999999998899999989999999-9998179998999637999999999999982


No 284
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=42.52  E-value=17  Score=16.06  Aligned_cols=70  Identities=19%  Similarity=0.253  Sum_probs=41.4

Q ss_pred             CCCHHHH--HHHHHC--CEEEEECCCHHHHHHHHHHHH---------H---CCCCEEEECCCHHHHHHHHH----HCCCC
Q ss_conf             8828899--999748--909998099899999999852---------1---48852771132788987653----12332
Q gi|255764511|r   46 GAGGYSR--SFCKMG--SNVIALDRDPFAVSCGQETMR---------D---YKEQFSLFQATFSQLQDYVP----DKGVD  105 (341)
Q Consensus        46 G~GGHS~--~iL~~~--~~liaiDrD~~ai~~a~~~l~---------~---~~~r~~~~~~~F~~i~~~l~----~~~vd  105 (341)
                      |.=|.|.  ++.+.+  .+|+|+|+|++.+..|.+.--         +   +..-+.++...-..+.+++.    ..+-+
T Consensus        42 G~mG~siA~~L~~~g~~~~V~g~D~~~~~~~~a~~~g~id~~~~~~~~~~~~~~dlIilavP~~~~~~vl~~l~~~l~~~  121 (314)
T 3ggo_A           42 GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAKKLSYILSED  121 (314)
T ss_dssp             SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGGHHHHHHHHHHHSCTT
T ss_pred             CHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCC
T ss_conf             88999999999806999889999799999999998699751148988872568888998355043210455431110345


Q ss_pred             EEEEECCCHH
Q ss_conf             4786225207
Q gi|255764511|r  106 GVVFDLGVSS  115 (341)
Q Consensus       106 gIl~DLGvSS  115 (341)
                      .++.|.|-.-
T Consensus       122 ~iI~Dv~SvK  131 (314)
T 3ggo_A          122 ATVTDQGSVK  131 (314)
T ss_dssp             CEEEECCSCC
T ss_pred             CCCCCCCCCC
T ss_conf             5445645541


No 285
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=41.76  E-value=17  Score=15.98  Aligned_cols=31  Identities=10%  Similarity=0.219  Sum_probs=22.4

Q ss_pred             HHHHHHHHCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             8999997489099980998999999998521
Q gi|255764511|r   50 YSRSFCKMGSNVIALDRDPFAVSCGQETMRD   80 (341)
Q Consensus        50 HS~~iL~~~~~liaiDrD~~ai~~a~~~l~~   80 (341)
                      =+..++..+-.|+-+|++++++..+.++++.
T Consensus        30 iA~~~a~~G~~V~l~D~~~e~l~~~~~~i~~   60 (302)
T 1f0y_A           30 IAQVAAATGHTVVLVDQTEDILAKSKKGIEE   60 (302)
T ss_dssp             HHHHHHHTTCEEEEECSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
T ss_conf             9999995899879998987899999999999


No 286
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=41.41  E-value=17  Score=15.95  Aligned_cols=78  Identities=17%  Similarity=0.265  Sum_probs=50.2

Q ss_pred             CCCEEEECCCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHH---HHHHHHH-----
Q ss_conf             8888998376882889----999974890999809989999999985214--8852771132788---9876531-----
Q gi|255764511|r   36 PGKVILDATFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQ---LQDYVPD-----  101 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~---i~~~l~~-----  101 (341)
                      +|.+.| -|-|.+|==    +.+++.+.+|+..||+++.+..+.+.++..  ..++.++..+.++   +...+..     
T Consensus        31 kgKval-ITGas~GIG~aiA~~la~~Ga~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           31 RDRLAL-VTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             TTCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC
T ss_conf             998899-9277878999999999987999999979889999999999856999519999745899999999999999973


Q ss_pred             CCCCEEEEECCCH
Q ss_conf             2332478622520
Q gi|255764511|r  102 KGVDGVVFDLGVS  114 (341)
Q Consensus       102 ~~vdgIl~DLGvS  114 (341)
                      ..+|.++-+-|+.
T Consensus       110 g~iDiLVnnAG~~  122 (279)
T 1xg5_A          110 SGVDICINNAGLA  122 (279)
T ss_dssp             CCCSEEEECCCCC
T ss_pred             CCCCEEEECCCCC
T ss_conf             9975899888779


No 287
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=40.71  E-value=18  Score=15.88  Aligned_cols=75  Identities=27%  Similarity=0.359  Sum_probs=48.2

Q ss_pred             CCCEEEECCCCCCHH----HHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHHH-----CC
Q ss_conf             888899837688288----99999748909998099899999999852148852771132788---9876531-----23
Q gi|255764511|r   36 PGKVILDATFGAGGY----SRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVPD-----KG  103 (341)
Q Consensus        36 ~~g~~iD~TlG~GGH----S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~~-----~~  103 (341)
                      +|.+.| -|=|.+|=    ++.+++.+.+|+..||+++.++...+.+   +.+..++..+.++   +......     .+
T Consensus         8 ~gK~al-VTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   83 (261)
T 3n74_A            8 EGKVAL-ITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSKFGK   83 (261)
T ss_dssp             TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH---CCCEEEEEEECCCHHHHHHHHHHHHHHHCC
T ss_conf             999899-9388878999999999987998999989999999999983---896799996279999999999999998099


Q ss_pred             CCEEEEECCCH
Q ss_conf             32478622520
Q gi|255764511|r  104 VDGVVFDLGVS  114 (341)
Q Consensus       104 vdgIl~DLGvS  114 (341)
                      +|.++..-|+.
T Consensus        84 iD~lVnnAG~~   94 (261)
T 3n74_A           84 VDILVNNAGIG   94 (261)
T ss_dssp             CCEEEECCCCC
T ss_pred             CEEEEECCCCC
T ss_conf             70999898545


No 288
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=40.54  E-value=18  Score=15.86  Aligned_cols=76  Identities=16%  Similarity=0.215  Sum_probs=42.6

Q ss_pred             HHHHHHHH-CCEEEE-ECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHHH----HHHH
Q ss_conf             89999974-890999-80998999999998521488527711327889876531233247862252078887----6540
Q gi|255764511|r   50 YSRSFCKM-GSNVIA-LDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVSSMQID----CGDR  123 (341)
Q Consensus        50 HS~~iL~~-~~~lia-iDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvSS~Qld----~~~R  123 (341)
                      |..++... +-.|+| .|+|++..+...   +.|+. ..    -|+++.+++....+|+|+.= --...|.+    -.++
T Consensus        21 h~~~l~~~~~~~lvav~d~~~~~~~~~a---~~~~~-~~----~~~~~~~ll~~~~iD~V~I~-tp~~~H~~~~~~al~~   91 (359)
T 3m2t_A           21 LLPSLLQMQDIRIVAACDSDLERARRVH---RFISD-IP----VLDNVPAMLNQVPLDAVVMA-GPPQLHFEMGLLAMSK   91 (359)
T ss_dssp             HHHHHHTCTTEEEEEEECSSHHHHGGGG---GTSCS-CC----EESSHHHHHHHSCCSEEEEC-SCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHCCCCEEEEEECCCHHHHHHHH---HHCCC-CC----EECCHHHHHCCCCCCEEEEC-CCHHHHHHHHHHHHHC
T ss_conf             9999983999589999889999999999---88499-85----31899999659999989987-8635435899999843


Q ss_pred             CCCCCCCCCEE
Q ss_conf             73445664101
Q gi|255764511|r  124 GFSFQKSGPLD  134 (341)
Q Consensus       124 GFSf~~dgpLD  134 (341)
                      |-..--+-|+-
T Consensus        92 Gk~V~~EKP~a  102 (359)
T 3m2t_A           92 GVNVFVEKPPC  102 (359)
T ss_dssp             TCEEEECSCSC
T ss_pred             CCEEEEEECCC
T ss_conf             98099985330


No 289
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=40.54  E-value=18  Score=15.86  Aligned_cols=31  Identities=29%  Similarity=0.397  Sum_probs=22.5

Q ss_pred             HHHHH--HHHHCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             88999--99748909998099899999999852
Q gi|255764511|r   49 GYSRS--FCKMGSNVIALDRDPFAVSCGQETMR   79 (341)
Q Consensus        49 GHS~~--iL~~~~~liaiDrD~~ai~~a~~~l~   79 (341)
                      |++-+  ++..+-.|+-+|++++++..+.++.+
T Consensus        18 G~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   50 (319)
T 2dpo_A           18 GRSWAMLFASGGFRVKLYDIEPRQITGALENIR   50 (319)
T ss_dssp             HHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH
T ss_conf             999999999689928999799899999999999


No 290
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: NAP; 2.07A {Thermotoga maritima MSB8} SCOP: c.2.1.2
Probab=40.39  E-value=18  Score=15.85  Aligned_cols=89  Identities=20%  Similarity=0.343  Sum_probs=54.2

Q ss_pred             CCCCCHHHHHHHHHCCCCCCE-EEECCCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHH-HHHCCCCEEEECCCH
Q ss_conf             833400986886608388888-998376882889----99997489099980998999999998-521488527711327
Q gi|255764511|r   19 DHVPVLLEKVIALLNPAPGKV-ILDATFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQET-MRDYKEQFSLFQATF   92 (341)
Q Consensus        19 ~H~PVll~Evl~~l~~~~~g~-~iD~TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~-l~~~~~r~~~~~~~F   92 (341)
                      .|.-+|-+    .++. .|.+ +|  |=|.+|==    +.+++.+.+|+..|++++.+..+.+. .+.++.++.++..+.
T Consensus         8 ~~~~~M~~----lf~L-~gKvalI--TGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~~g~~~~~~~~Dv   80 (267)
T 1vl8_A            8 HHHHHMKE----VFDL-RGRVALV--TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV   80 (267)
T ss_dssp             -------------CCC-TTCEEEE--ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT
T ss_pred             CCHHHCCC----CCCC-CCCEEEE--ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             12354051----6288-9998999--489878999999999987998999979889999999999997099579999348


Q ss_pred             HHHH---HHHH----H-CCCCEEEEECCCH
Q ss_conf             8898---7653----1-2332478622520
Q gi|255764511|r   93 SQLQ---DYVP----D-KGVDGVVFDLGVS  114 (341)
Q Consensus        93 ~~i~---~~l~----~-~~vdgIl~DLGvS  114 (341)
                      ++-+   +.+.    . .++|.++-.-|+.
T Consensus        81 ~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~  110 (267)
T 1vl8_A           81 SNYEEVKKLLEAVKEKFGKLDTVVNAAGIN  110 (267)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             CCHHHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf             999999999999999759998999899989


No 291
>2o3f_A Putative HTH-type transcriptional regulator YBBH; APC85504, putative transcriptional regulator YBBH; HET: MLY; 1.75A {Bacillus subtilis} SCOP: a.4.1.20
Probab=39.97  E-value=18  Score=15.81  Aligned_cols=74  Identities=18%  Similarity=0.253  Sum_probs=49.9

Q ss_pred             HHCCHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHCCCCCHHHHHHHHH----HHHHHHHCCCCHHHHHHHHHHHHHHCC
Q ss_conf             62225789989997446302-6889999999975212432137999999----887643127712578888887665134
Q gi|255764511|r  149 NQANVKDLTRILGILGEEKQ-ASRIAHAIVKRRQSAPFQTTQDLSSLIQ----KTVYFSKNNRIHPATRSFQALRIFVNN  223 (341)
Q Consensus       149 n~~s~~~L~~i~~~yGee~~-a~~IA~~Iv~~R~~~~i~TT~eL~~iI~----~~~~~~~~~k~hpatr~FQALRI~VN~  223 (341)
                      |..+-.-|..|-..|++... -++||+-|......-+..|..+|++-..    ..+++.++-+.    .-|+.+|+++-+
T Consensus         2 ~~m~~~~l~~I~~~~~~Lt~~E~~Ia~yil~n~~~v~~~si~elA~~~~vS~aTI~Rf~kklGf----~gf~efk~~l~~   77 (111)
T 2o3f_A            2 NAMATGGLAIIQSMXHXLPPSERKLADYILAHPHXAIESTVNEISALANSSDAAVIRLCXSLGL----KGFQDLXMRVAG   77 (111)
T ss_dssp             --CCCCHHHHHHHHGGGSCHHHHHHHHHHHHCHHHHHTCCHHHHHHHTTCCHHHHHHHHHHTTC----SSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCC----CCHHHHHHHHHH
T ss_conf             7201679999998634179999999999995924764378999998979898799999999277----989999999999


Q ss_pred             CHH
Q ss_conf             057
Q gi|255764511|r  224 EIE  226 (341)
Q Consensus       224 El~  226 (341)
                      |+.
T Consensus        78 ~~~   80 (111)
T 2o3f_A           78 DLA   80 (111)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             975


No 292
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=39.63  E-value=18  Score=15.77  Aligned_cols=61  Identities=13%  Similarity=0.264  Sum_probs=38.2

Q ss_pred             CCCCH----HHHHHHHHCC--EEEE-ECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             68828----8999997489--0999-80998999999998521488527711327889876531233247862252
Q gi|255764511|r   45 FGAGG----YSRSFCKMGS--NVIA-LDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGV  113 (341)
Q Consensus        45 lG~GG----HS~~iL~~~~--~lia-iDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGv  113 (341)
                      .|.|.    |...++...+  .++| .|+|+++.+.+.+.   |+..     ..|.++++++....+|+|+.----
T Consensus        14 IG~G~~g~~~~~~~~~~~~~~~l~~i~d~~~~~~~~~~~~---~~~~-----~~~~~~~~ll~~~~vD~v~I~tp~   81 (346)
T 3cea_A           14 IGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNE---LGVE-----TTYTNYKDMIDTENIDAIFIVAPT   81 (346)
T ss_dssp             ECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHT---TCCS-----EEESCHHHHHTTSCCSEEEECSCG
T ss_pred             ECCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH---CCCC-----CCCCCHHHHHCCCCCCEEEEECHH
T ss_conf             9884999999999985499968999987999999999998---2998-----515999999648998889995717


No 293
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=38.87  E-value=19  Score=15.70  Aligned_cols=75  Identities=20%  Similarity=0.300  Sum_probs=46.7

Q ss_pred             EEECCCCCCHHH----HHHHHHCCEEEEECCCHHHHHHH-HHHHHHCCCCEEEECCCHHHH---HHHHH----H-CCCCE
Q ss_conf             998376882889----99997489099980998999999-998521488527711327889---87653----1-23324
Q gi|255764511|r   40 ILDATFGAGGYS----RSFCKMGSNVIALDRDPFAVSCG-QETMRDYKEQFSLFQATFSQL---QDYVP----D-KGVDG  106 (341)
Q Consensus        40 ~iD~TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a-~~~l~~~~~r~~~~~~~F~~i---~~~l~----~-~~vdg  106 (341)
                      .+=-|=|.+|==    +.+++.+.+|+..|++++....+ .+..++++.++.++..+.++-   .+...    . .++|.
T Consensus        16 ~alVTGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   95 (265)
T 1h5q_A           16 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG   95 (265)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCE
T ss_conf             79992888789999999999879989999797788999999999970995799990189999999999999997299989


Q ss_pred             EEEECCCH
Q ss_conf             78622520
Q gi|255764511|r  107 VVFDLGVS  114 (341)
Q Consensus       107 Il~DLGvS  114 (341)
                      ++-.-|++
T Consensus        96 lVnnAG~~  103 (265)
T 1h5q_A           96 LIANAGVS  103 (265)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
T ss_conf             99899889


No 294
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=38.76  E-value=19  Score=15.69  Aligned_cols=68  Identities=18%  Similarity=0.156  Sum_probs=42.8

Q ss_pred             CCCCCHH----HHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHH---HHHHHH-----CCCCEEEEEC
Q ss_conf             7688288----999997489099980998999999998521488527711327889---876531-----2332478622
Q gi|255764511|r   44 TFGAGGY----SRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQL---QDYVPD-----KGVDGVVFDL  111 (341)
Q Consensus        44 TlG~GGH----S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i---~~~l~~-----~~vdgIl~DL  111 (341)
                      |=|.+|=    ++.+++.+.+|+..|++++.++...+.+   +++..++..+.++.   .+++..     .++|.++-+-
T Consensus        13 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~el---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilvnnA   89 (260)
T 1nff_A           13 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNA   89 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH---CCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             488878999999999987999999979889999999985---18717999847999999999999999749998999899


Q ss_pred             CCH
Q ss_conf             520
Q gi|255764511|r  112 GVS  114 (341)
Q Consensus       112 GvS  114 (341)
                      |+.
T Consensus        90 G~~   92 (260)
T 1nff_A           90 GIL   92 (260)
T ss_dssp             CCC
T ss_pred             CCC
T ss_conf             999


No 295
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=37.83  E-value=20  Score=15.59  Aligned_cols=72  Identities=21%  Similarity=0.285  Sum_probs=49.0

Q ss_pred             CCCCCHH----HHHHHHH-CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHH---HHHH-----HCCCCEEEEE
Q ss_conf             7688288----9999974-890999809989999999985214885277113278898---7653-----1233247862
Q gi|255764511|r   44 TFGAGGY----SRSFCKM-GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQ---DYVP-----DKGVDGVVFD  110 (341)
Q Consensus        44 TlG~GGH----S~~iL~~-~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~---~~l~-----~~~vdgIl~D  110 (341)
                      |-|..|=    ++.+++. +.+|+..+|+++..+.+.+.++..+.+..++....++.+   ....     ..++|.++-+
T Consensus        10 TGas~GIG~a~A~~la~~~g~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnN   89 (276)
T 1wma_A           10 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNN   89 (276)
T ss_dssp             SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEEC
T ss_pred             CCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf             77887899999999998189989999799899999999998559957999932899999999999999972997789976


Q ss_pred             CCCHH
Q ss_conf             25207
Q gi|255764511|r  111 LGVSS  115 (341)
Q Consensus       111 LGvSS  115 (341)
                      =|+..
T Consensus        90 AGi~~   94 (276)
T 1wma_A           90 AGIAF   94 (276)
T ss_dssp             CCCCC
T ss_pred             CCCCC
T ss_conf             72367


No 296
>1xhl_A Short-chain dehydrogenase/reductase family member (5L265), putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=37.54  E-value=20  Score=15.56  Aligned_cols=93  Identities=18%  Similarity=0.210  Sum_probs=56.5

Q ss_pred             CCCCHHHHHHHHHCCCCCCEEEECCCCCCHH----HHHHHHHCCEEEEECCCHHHHHHHHHHHHHC---CCCEEEECCCH
Q ss_conf             3340098688660838888899837688288----9999974890999809989999999985214---88527711327
Q gi|255764511|r   20 HVPVLLEKVIALLNPAPGKVILDATFGAGGY----SRSFCKMGSNVIALDRDPFAVSCGQETMRDY---KEQFSLFQATF   92 (341)
Q Consensus        20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGH----S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~---~~r~~~~~~~F   92 (341)
                      |-|=|...--. ..-..|.+ +=-|=|.+|=    ++.+++.+.+|+..||+++.+..+.+.+.+.   ..++..+..+.
T Consensus        10 ~~~g~~~rg~~-M~rL~GKv-alVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~i~~~g~~~~~v~~~~~Dv   87 (297)
T 1xhl_A           10 HSSGLVPRGSH-MARFSGKS-VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV   87 (297)
T ss_dssp             --------------CCTTCE-EEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT
T ss_pred             CCCCCCCCCCC-CCCCCCCE-EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEC
T ss_conf             46788869898-88889988-99947786899999999998799899998999999999999997489876368998008


Q ss_pred             HH---HHHHHHH-----CCCCEEEEECCCH
Q ss_conf             88---9876531-----2332478622520
Q gi|255764511|r   93 SQ---LQDYVPD-----KGVDGVVFDLGVS  114 (341)
Q Consensus        93 ~~---i~~~l~~-----~~vdgIl~DLGvS  114 (341)
                      ++   +..++..     .++|.++-+-|++
T Consensus        88 s~~~~v~~~~~~~~~~~G~iDiLVnnAG~~  117 (297)
T 1xhl_A           88 TEASGQDDIINTTLAKFGKIDILVNNAGAN  117 (297)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             CCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             999999999999999829987899888656


No 297
>1s5l_U Photosystem II 12 kDa extrinsic protein; photosynthesis, oxygen-evolving, tetra- manganese, membrane; HET: CL1 PHO HEM PL9 LMT BCR; 3.50A {Thermosynechococcus elongatus}
Probab=37.03  E-value=3.5  Score=20.47  Aligned_cols=39  Identities=26%  Similarity=0.450  Sum_probs=29.3

Q ss_pred             HHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf             986222578998999744630268899999999752124321379999
Q gi|255764511|r  147 VVNQANVKDLTRILGILGEEKQASRIAHAIVKRRQSAPFQTTQDLSSL  194 (341)
Q Consensus       147 iln~~s~~~L~~i~~~yGee~~a~~IA~~Iv~~R~~~~i~TT~eL~~i  194 (341)
                      =||+.+.++|..+ .-.     ...+|++||++   +|+.+..||.++
T Consensus        56 dlN~A~~~eL~~l-pGi-----g~~~A~~Iv~~---gpf~svedl~~v   94 (134)
T 1s5l_U           56 DLNNTNIAAFIQY-RGL-----YPTLAKLIVKN---APYESVEDVLNI   94 (134)
T ss_dssp             ETTTSCGGGGGGS-TTC-----THHHHHHHHHT---CCCSSGGGGGGC
T ss_pred             ECCCCCHHHHHHH-HHH-----HHHHHHHHHHC---CCCCCHHHHHCC
T ss_conf             1640789999771-034-----69999999982---784879999617


No 298
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=35.75  E-value=21  Score=15.38  Aligned_cols=78  Identities=19%  Similarity=0.299  Sum_probs=51.1

Q ss_pred             CCCE-EEECCCCCC---HH--HHHHHHHCCEEEEECCCHHHHHHHHHHHHHC-CCCEEEECCCHHH---HHHHHHH----
Q ss_conf             8888-998376882---88--9999974890999809989999999985214-8852771132788---9876531----
Q gi|255764511|r   36 PGKV-ILDATFGAG---GY--SRSFCKMGSNVIALDRDPFAVSCGQETMRDY-KEQFSLFQATFSQ---LQDYVPD----  101 (341)
Q Consensus        36 ~~g~-~iD~TlG~G---GH--S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~-~~r~~~~~~~F~~---i~~~l~~----  101 (341)
                      .|.+ +|  |-|.|   |.  ++.+++.+.+|+..|++++.+..+.+.+.+. ..++.++..+.++   ++.....    
T Consensus        21 ~gKvalI--TGasg~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~i~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   98 (266)
T 3o38_A           21 KGKVVLV--TAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK   98 (266)
T ss_dssp             TTCEEEE--SSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEE--ECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf             9997999--49997489999999999879989999798899999999998517984899991589999999999999998


Q ss_pred             -CCCCEEEEECCCHH
Q ss_conf             -23324786225207
Q gi|255764511|r  102 -KGVDGVVFDLGVSS  115 (341)
Q Consensus       102 -~~vdgIl~DLGvSS  115 (341)
                       .++|.++-+-|+..
T Consensus        99 ~g~iDilVnnAG~~~  113 (266)
T 3o38_A           99 AGRLDVLVNNAGLGG  113 (266)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             HCCCCEEEECCCCCC
T ss_conf             099859998998899


No 299
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=35.74  E-value=21  Score=15.38  Aligned_cols=77  Identities=21%  Similarity=0.256  Sum_probs=48.6

Q ss_pred             CCCEEEECCCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHH----H-CC
Q ss_conf             8888998376882889----9999748909998099899999999852148852771132788---987653----1-23
Q gi|255764511|r   36 PGKVILDATFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVP----D-KG  103 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~----~-~~  103 (341)
                      +|.+. =-|=|.+|==    +.+++.+.+|+..|++++.++.+.+.+.. .+++.++..+.++   +...+.    . ..
T Consensus        15 ~gKva-lVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~-~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   92 (278)
T 2bgk_A           15 QDKVA-IITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKHGK   92 (278)
T ss_dssp             TTCEE-EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEE-EEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCC-CCCEEEEECCCCCHHHHHHHHHHHHHHHCC
T ss_conf             99989-9948687899999999998799899997988999999998358-996799985789999999999999998299


Q ss_pred             CCEEEEECCCH
Q ss_conf             32478622520
Q gi|255764511|r  104 VDGVVFDLGVS  114 (341)
Q Consensus       104 vdgIl~DLGvS  114 (341)
                      +|.++..-|+.
T Consensus        93 iDilVnnAG~~  103 (278)
T 2bgk_A           93 LDIMFGNVGVL  103 (278)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEECCCCCC
T ss_conf             88740156536


No 300
>3bz1_U Photosystem II 12 kDa extrinsic protein; electron transport photosystem, membrane complex, transmembrane alpha-helix; HET: CLA PHO HEM PL9 BCR DGD LHG SQD LMG LMT; 2.90A {Thermosynechococcus elongatus} PDB: 2axt_U* 3bz2_U* 3kzi_U* 3a0b_U* 3a0h_U*
Probab=34.99  E-value=4.5  Score=19.73  Aligned_cols=38  Identities=26%  Similarity=0.487  Sum_probs=28.7

Q ss_pred             HHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf             86222578998999744630268899999999752124321379999
Q gi|255764511|r  148 VNQANVKDLTRILGILGEEKQASRIAHAIVKRRQSAPFQTTQDLSSL  194 (341)
Q Consensus       148 ln~~s~~~L~~i~~~yGee~~a~~IA~~Iv~~R~~~~i~TT~eL~~i  194 (341)
                      ||+.+..+|..+ .-.     ...+|++||++   +||.+..||.++
T Consensus        27 lN~As~~eL~~l-pGi-----g~~~A~~Iv~~---gpf~s~~dL~~V   64 (104)
T 3bz1_U           27 LNNTNIAAFIQY-RGL-----YPTLAKLIVKN---APYESVEDVLNI   64 (104)
T ss_dssp             TTSSCGGGGGGS-TTT-----THHHHHHHHHS---CCCSSGGGGGGC
T ss_pred             CCCCCHHHHHHC-CCC-----CHHHHHHHHHC---CCCCCHHHHHCC
T ss_conf             840899999658-997-----99999999974---997989999638


No 301
>2i5h_A Hypothetical protein AF1531; PFAM:DUF655, PSI-2, structural genomics, protein structure initiative; 1.74A {Archaeoglobus fulgidus} SCOP: e.71.1.1
Probab=34.78  E-value=22  Score=15.29  Aligned_cols=27  Identities=22%  Similarity=0.594  Sum_probs=21.8

Q ss_pred             HHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf             688999999997521243213799999
Q gi|255764511|r  169 ASRIAHAIVKRRQSAPFQTTQDLSSLI  195 (341)
Q Consensus       169 a~~IA~~Iv~~R~~~~i~TT~eL~~iI  195 (341)
                      -++.+..|+.+|++++|++=.||.+-|
T Consensus       141 GKK~~~~IleeR~k~~FeSFedi~~Rv  167 (205)
T 2i5h_A          141 GKKMMWAIIEERKKRPFESFEDIAQRV  167 (205)
T ss_dssp             CHHHHHHHHHHHHHSCCCSHHHHHHHS
T ss_pred             CHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf             589999999996558988999999884


No 302
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1G07440, reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=34.35  E-value=22  Score=15.24  Aligned_cols=78  Identities=17%  Similarity=0.181  Sum_probs=51.1

Q ss_pred             CCCEEEECCCCCCHHHH----HHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHH----HH--C
Q ss_conf             88889983768828899----999748909998099899999999852148852771132788---98765----31--2
Q gi|255764511|r   36 PGKVILDATFGAGGYSR----SFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYV----PD--K  102 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS~----~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l----~~--~  102 (341)
                      .|.+.| -|=|.+|=-+    .+++.+.+|+..||+++.+..+.+.+.....++.++..+.++   +..++    ..  .
T Consensus        13 ~gK~al-ITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   91 (266)
T 1xq1_A           13 KAKTVL-VTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TTCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC
T ss_conf             999899-9279868999999999987999999979999999999998732980899985689999999999999998299


Q ss_pred             CCCEEEEECCCH
Q ss_conf             332478622520
Q gi|255764511|r  103 GVDGVVFDLGVS  114 (341)
Q Consensus       103 ~vdgIl~DLGvS  114 (341)
                      .+|.++..-|+.
T Consensus        92 ~id~lvnnAG~~  103 (266)
T 1xq1_A           92 KLDILINNLGAI  103 (266)
T ss_dssp             CCSEEEEECCC-
T ss_pred             CCEEEEECCCCC
T ss_conf             970999899878


No 303
>3o7i_A OHCU decarboxylase; lyase; 1.50A {Klebsiella pneumoniae subsp} PDB: 3o7h_A 3o7j_A* 3o7k_A
Probab=34.35  E-value=22  Score=15.24  Aligned_cols=51  Identities=16%  Similarity=0.167  Sum_probs=40.2

Q ss_pred             HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             899986222578998999744630268899999999752124321379999998876
Q gi|255764511|r  144 ASDVVNQANVKDLTRILGILGEEKQASRIAHAIVKRRQSAPFQTTQDLSSLIQKTVY  200 (341)
Q Consensus       144 A~eiln~~s~~~L~~i~~~yGee~~a~~IA~~Iv~~R~~~~i~TT~eL~~iI~~~~~  200 (341)
                      .-+-+|.+++++....|..-.+-+.|   |..++..|   ||.+..+|......++.
T Consensus        26 ~L~~~N~l~~~ea~~~l~~~~~~~~W---a~~~~~~R---PF~s~~~L~~a~~~~~~   76 (189)
T 3o7i_A           26 ALSQFNSLSKDEAAGLLAPCVALPAW---GETLVSLR---PFASRHALLQTAREAMA   76 (189)
T ss_dssp             CHHHHHHSCHHHHHHHHGGGCSCHHH---HHHHHHTC---CCSCHHHHHHHHHHHHH
T ss_pred             CHHHHHCCCHHHHHHHHHHHHCCHHH---HHHHHHCC---CCCCHHHHHHHHHHHHH
T ss_conf             49988678999999999999678899---99999769---99999999999999998


No 304
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=34.29  E-value=22  Score=15.24  Aligned_cols=73  Identities=14%  Similarity=0.164  Sum_probs=49.1

Q ss_pred             CCCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHHHHHC---CCCEEEECCCHHH---HHHHHHH-----CCCCEE
Q ss_conf             376882889----999974890999809989999999985214---8852771132788---9876531-----233247
Q gi|255764511|r   43 ATFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQETMRDY---KEQFSLFQATFSQ---LQDYVPD-----KGVDGV  107 (341)
Q Consensus        43 ~TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~l~~~---~~r~~~~~~~F~~---i~~~l~~-----~~vdgI  107 (341)
                      -|=|.+|==    +.+++.+.+|+..||+++.++.+.+.+...   ..++..+..+.++   +.+.+..     .++|.+
T Consensus        11 VTGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL   90 (278)
T 1spx_A           11 ITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDIL   90 (278)
T ss_dssp             ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEE
T ss_conf             94858789999999999879989999798899999999999657877765799855799999999999999981999889


Q ss_pred             EEECCCHH
Q ss_conf             86225207
Q gi|255764511|r  108 VFDLGVSS  115 (341)
Q Consensus       108 l~DLGvSS  115 (341)
                      +-.-|+..
T Consensus        91 VnnAG~~~   98 (278)
T 1spx_A           91 VNNAGAAI   98 (278)
T ss_dssp             EECCC---
T ss_pred             EECCCCCC
T ss_conf             98998678


No 305
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=33.89  E-value=23  Score=15.19  Aligned_cols=72  Identities=18%  Similarity=0.128  Sum_probs=46.1

Q ss_pred             CCCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHHHHH--CCCCEEEECCC---HHHHHHHHHH-----CCCCEEE
Q ss_conf             376882889----99997489099980998999999998521--48852771132---7889876531-----2332478
Q gi|255764511|r   43 ATFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQETMRD--YKEQFSLFQAT---FSQLQDYVPD-----KGVDGVV  108 (341)
Q Consensus        43 ~TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~l~~--~~~r~~~~~~~---F~~i~~~l~~-----~~vdgIl  108 (341)
                      -|-|.+|==    +.+++.+.+|+..|++++.+..+.+.++.  .+.++.++..+   .+++......     ..+|.++
T Consensus        13 ITGas~GIG~a~a~~la~~Ga~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~G~iDiLv   92 (319)
T 3ioy_A           13 VTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSILC   92 (319)
T ss_dssp             EETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEE
T ss_conf             92888789999999999879989999898899999999998407898089997668999999999999999749977899


Q ss_pred             EECCCH
Q ss_conf             622520
Q gi|255764511|r  109 FDLGVS  114 (341)
Q Consensus       109 ~DLGvS  114 (341)
                      -+=|++
T Consensus        93 nNAGi~   98 (319)
T 3ioy_A           93 NNAGVN   98 (319)
T ss_dssp             ECCCCC
T ss_pred             ECCCCC
T ss_conf             878646


No 306
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=33.50  E-value=23  Score=15.15  Aligned_cols=32  Identities=16%  Similarity=0.192  Sum_probs=23.9

Q ss_pred             HHHHH--HHHHCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             88999--997489099980998999999998521
Q gi|255764511|r   49 GYSRS--FCKMGSNVIALDRDPFAVSCGQETMRD   80 (341)
Q Consensus        49 GHS~~--iL~~~~~liaiDrD~~ai~~a~~~l~~   80 (341)
                      |+.-+  ++..+..|+-+|.|++++..+.++++.
T Consensus        17 G~~IA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~   50 (483)
T 3mog_A           17 GAGIAEVAASHGHQVLLYDISAEALTRAIDGIHA   50 (483)
T ss_dssp             HHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
T ss_conf             9999999995899689997999999999999999


No 307
>3lls_A 3-ketoacyl-(acyl-carrier-protein) reductase; niaid, emerald biostructures, UW, SBRI, oxidoreductase, structural genomics; 2.40A {Mycobacterium tuberculosis}
Probab=33.44  E-value=7.8  Score=18.17  Aligned_cols=12  Identities=33%  Similarity=0.650  Sum_probs=5.3

Q ss_pred             HCCEEEEECCCH
Q ss_conf             489099980998
Q gi|255764511|r   57 MGSNVIALDRDP   68 (341)
Q Consensus        57 ~~~~liaiDrD~   68 (341)
                      .+.+|+..|+++
T Consensus       257 ~GA~Vvi~dr~~  268 (475)
T 3lls_A          257 DGAHVVAIDVES  268 (475)
T ss_dssp             TTCEEEEEECGG
T ss_pred             CCCEEEEEECCH
T ss_conf             699899995966


No 308
>3cg0_A Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; signal receiver domain; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=33.42  E-value=23  Score=15.15  Aligned_cols=56  Identities=11%  Similarity=0.035  Sum_probs=43.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             89099980998999999998521488527711327889876531233247862252
Q gi|255764511|r   58 GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGV  113 (341)
Q Consensus        58 ~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGv  113 (341)
                      .++|.-+|-|+......+..|+.++-.+.-...+-.+..+.+....+|.|+.|+..
T Consensus         9 ~~~ILvVDD~~~~~~~l~~~L~~~G~~v~~~a~~~~eal~~~~~~~~dlvi~D~~m   64 (140)
T 3cg0_A            9 LPGVLIVEDGRLAAATLRIQLESLGYDVLGVFDNGEEAVRCAPDLRPDIALVDIML   64 (140)
T ss_dssp             CCEEEEECCBHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHCCSEEEEESSC
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCC
T ss_conf             99899997999999999999998799899997899999999982799889997678


No 309
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogenase; structural genomics, short-chain dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=32.78  E-value=24  Score=15.08  Aligned_cols=73  Identities=19%  Similarity=0.205  Sum_probs=48.6

Q ss_pred             CCCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHH---HHHHHHH-----CCCCEEE
Q ss_conf             376882889----999974890999809989999999985214--8852771132788---9876531-----2332478
Q gi|255764511|r   43 ATFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQ---LQDYVPD-----KGVDGVV  108 (341)
Q Consensus        43 ~TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~---i~~~l~~-----~~vdgIl  108 (341)
                      -|=|.+|==    +.+++.+.+|+..|++++....+.+.+.+.  +.++.++..+.++   +.+.+..     .++|.++
T Consensus        12 ITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLV   91 (267)
T 2gdz_A           12 VTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILV   91 (267)
T ss_dssp             EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEE
T ss_conf             92858789999999999879989999797888999999999752798489999527999999999999999729988999


Q ss_pred             EECCCHH
Q ss_conf             6225207
Q gi|255764511|r  109 FDLGVSS  115 (341)
Q Consensus       109 ~DLGvSS  115 (341)
                      -+-|+++
T Consensus        92 nNAG~~~   98 (267)
T 2gdz_A           92 NNAGVNN   98 (267)
T ss_dssp             ECCCCCC
T ss_pred             ECCCCCC
T ss_conf             8998797


No 310
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structure initiative; 1.80A {Bacteroides fragilis YCH46}
Probab=32.00  E-value=24  Score=15.00  Aligned_cols=55  Identities=11%  Similarity=0.163  Sum_probs=41.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             89099980998999999998521488527711327889876531233247862252
Q gi|255764511|r   58 GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGV  113 (341)
Q Consensus        58 ~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGv  113 (341)
                      -++|+-+|=|+.....-+..|+.++.++... .+-.+..+.+....+|.||.|+.+
T Consensus         3 ~~~ILiVDDd~~~~~~l~~~L~~~g~~v~~a-~~~~~al~~l~~~~~dlillDl~m   57 (140)
T 2qr3_A            3 LGTIIIVDDNKGVLTAVQLLLKNHFSKVITL-SSPVSLSTVLREENPEVVLLDMNF   57 (140)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHTTTSSEEEEE-CCHHHHHHHHHHSCEEEEEEETTT
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEE-CCHHHHHHHHHHCCCCEEEEECCC
T ss_conf             9989999799999999999999789999998-999999999972799999991688


No 311
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=31.69  E-value=25  Score=14.96  Aligned_cols=80  Identities=15%  Similarity=0.167  Sum_probs=43.3

Q ss_pred             CCCCHHH----HHHHHH-CCEEEE-ECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHH
Q ss_conf             6882889----999974-890999-8099899999999852148852771132788987653123324786225207888
Q gi|255764511|r   45 FGAGGYS----RSFCKM-GSNVIA-LDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVSSMQI  118 (341)
Q Consensus        45 lG~GGHS----~~iL~~-~~~lia-iDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvSS~Ql  118 (341)
                      .|.|+-+    ..++.. +..|+| .|+|++......   ++|+.-     ..|+++++++....+|+|+.=.=- +.|.
T Consensus         6 IG~G~~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~---~~~~~~-----~~~~~~~e~l~~~~iD~v~i~tp~-~~H~   76 (332)
T 2glx_A            6 IGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYA---TENGIG-----KSVTSVEELVGDPDVDAVYVSTTN-ELHR   76 (332)
T ss_dssp             ESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHH---HHTTCS-----CCBSCHHHHHTCTTCCEEEECSCG-GGHH
T ss_pred             ECCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH---HHHCCC-----CEECCHHHHHCCCCCCEEEECCCC-HHHH
T ss_conf             9966999999999973899789999849999999999---980999-----401899999569999999996884-4657


Q ss_pred             HHHH----HCCCCCCCCCE
Q ss_conf             7654----07344566410
Q gi|255764511|r  119 DCGD----RGFSFQKSGPL  133 (341)
Q Consensus       119 d~~~----RGFSf~~dgpL  133 (341)
                      +-..    +|--.--+-||
T Consensus        77 ~~~~~al~~gk~v~~EKP~   95 (332)
T 2glx_A           77 EQTLAAIRAGKHVLCEKPL   95 (332)
T ss_dssp             HHHHHHHHTTCEEEECSSS
T ss_pred             HHHHHHHHCCCCEECCCCC
T ss_conf             8899999869987536773


No 312
>3cg4_A Response regulator receiver domain protein (CHEY- like); structural genomics, unknown function, uncharacterized protein; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=31.52  E-value=25  Score=14.95  Aligned_cols=57  Identities=14%  Similarity=0.082  Sum_probs=43.8

Q ss_pred             HCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCH
Q ss_conf             4890999809989999999985214885277113278898765312332478622520
Q gi|255764511|r   57 MGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVS  114 (341)
Q Consensus        57 ~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvS  114 (341)
                      ..++|+-+|=|+......++.|+.++-++.. -.+-.+.-+.+....+|-|++|+.+.
T Consensus         6 ~k~~VLiVDD~~~~r~~l~~~L~~~g~~v~~-a~~g~eal~~l~~~~~dliilD~~mP   62 (142)
T 3cg4_A            6 HKGDVMIVDDDAHVRIAVKTILSDAGFHIIS-ADSGGQCIDLLKKGFSGVVLLDIMMP   62 (142)
T ss_dssp             CCCEEEEECSCHHHHHHHHHHHHHTTCEEEE-ESSHHHHHHHHHTCCCEEEEEESCCS
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCEEEE-ECCHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             9995999979899999999999987999999-89999999999717999999838999


No 313
>1k2w_A Sorbitol dehydrogenase; short-chain dehydrogenase, enzyme, oxidoreductase; 2.40A {Rhodobacter sphaeroides} SCOP: c.2.1.2
Probab=31.28  E-value=25  Score=14.92  Aligned_cols=68  Identities=15%  Similarity=0.161  Sum_probs=44.7

Q ss_pred             CCCCCHH----HHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHHH-----CCCCEEEEEC
Q ss_conf             7688288----99999748909998099899999999852148852771132788---9876531-----2332478622
Q gi|255764511|r   44 TFGAGGY----SRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVPD-----KGVDGVVFDL  111 (341)
Q Consensus        44 TlG~GGH----S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~~-----~~vdgIl~DL  111 (341)
                      |=|.+|=    ++.+++.+.+|+..|++++.+....+.   ++.++..+..+.++   +.+.+..     .++|.++-.-
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA   87 (256)
T 1k2w_A           11 TGSARGIGRAFAEAYVREGARVAIADINLEAARATAAE---IGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNA   87 (256)
T ss_dssp             ETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHH---HCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---HCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             38886899999999998799899997989999999998---589569999738999999999999999769997999899


Q ss_pred             CCH
Q ss_conf             520
Q gi|255764511|r  112 GVS  114 (341)
Q Consensus       112 GvS  114 (341)
                      |+.
T Consensus        88 G~~   90 (256)
T 1k2w_A           88 ALF   90 (256)
T ss_dssp             CCC
T ss_pred             CCC
T ss_conf             999


No 314
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=31.00  E-value=25  Score=14.89  Aligned_cols=78  Identities=18%  Similarity=0.310  Sum_probs=49.4

Q ss_pred             CCCEEEECCCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHH---HHHHHHH-----
Q ss_conf             8888998376882889----999974890999809989999999985214--8852771132788---9876531-----
Q gi|255764511|r   36 PGKVILDATFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQ---LQDYVPD-----  101 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~---i~~~l~~-----  101 (341)
                      .|.+.| -|=|.+|==    +.+++.+.+|+..|++++.++.+.+.+.+.  +.++..+..+.++   +...+..     
T Consensus        12 ~gKval-VTGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           12 TDRVVL-ITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   90 (267)
T ss_dssp             TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHC
T ss_conf             979899-9378878999999999987998999978888899999999984799739999714899999999999999974


Q ss_pred             CCCCEEEEECCCH
Q ss_conf             2332478622520
Q gi|255764511|r  102 KGVDGVVFDLGVS  114 (341)
Q Consensus       102 ~~vdgIl~DLGvS  114 (341)
                      .++|.++-+-|++
T Consensus        91 G~iDiLVnNAG~~  103 (267)
T 1iy8_A           91 GRIDGFFNNAGIE  103 (267)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCCCC
T ss_conf             9998999899888


No 315
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=30.72  E-value=25  Score=14.86  Aligned_cols=75  Identities=15%  Similarity=0.248  Sum_probs=45.1

Q ss_pred             EEEE-CCCCCCHH-HHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHHH-----CCCCEEE
Q ss_conf             8998-37688288-99999748909998099899999999852148852771132788---9876531-----2332478
Q gi|255764511|r   39 VILD-ATFGAGGY-SRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVPD-----KGVDGVV  108 (341)
Q Consensus        39 ~~iD-~TlG~GGH-S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~~-----~~vdgIl  108 (341)
                      ++|= |+=|-|-. ++.+++.+.+|+..||+++.++...+.+... .++..+.....+   +......     ..+|.++
T Consensus        24 vLVTGas~GIG~aiA~~la~~Ga~Vvl~~r~~e~l~~~~~el~~~-~~~~~~~~dv~~~~~~~~~~~~~~~~~g~iDilV  102 (272)
T 2nwq_A           24 LFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLI  102 (272)
T ss_dssp             EEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEE
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCC-CCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             999875879999999999987998999989999999999985047-8779999512227888887655687648841999


Q ss_pred             EECCCH
Q ss_conf             622520
Q gi|255764511|r  109 FDLGVS  114 (341)
Q Consensus       109 ~DLGvS  114 (341)
                      -+-|+.
T Consensus       103 nnAG~~  108 (272)
T 2nwq_A          103 NNAGLA  108 (272)
T ss_dssp             ECCCCC
T ss_pred             ECCCCC
T ss_conf             878646


No 316
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant protein; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=30.51  E-value=26  Score=14.84  Aligned_cols=36  Identities=19%  Similarity=0.365  Sum_probs=21.3

Q ss_pred             HHHHHHHHHHHHHCCC---CCCEEEEEEEC---CCHHHHHHH
Q ss_conf             5789999998852024---45338998725---502389999
Q gi|255764511|r  225 IEELAQGLRSAEKALK---AGGLLIVVSFH---SLEDRLVKK  260 (341)
Q Consensus       225 l~~L~~~L~~~~~~L~---~gGrl~VISFH---SLEDRiVK~  260 (341)
                      -+.-...|..+.+.|+   ||||+.|+-+-   ..+|+....
T Consensus       266 d~~~~~iL~~~~~Al~~~~pgg~vli~e~~~~~~~~~~~~~~  307 (358)
T 1zg3_A          266 DEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTE  307 (358)
T ss_dssp             HHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCHHH
T ss_conf             689999999999970646998289999842588888630267


No 317
>3js3_A 3-dehydroquinate dehydratase; AROD, covalent reaction intermediate, amino-acid biosynthesis, aromatic amino acid biosynthesis, lyase; HET: DHS; 2.20A {Clostridium difficile 630}
Probab=30.39  E-value=18  Score=15.89  Aligned_cols=26  Identities=4%  Similarity=-0.036  Sum_probs=9.2

Q ss_pred             CCCHHHH-HHHHHHHHHCCCCEEEECC
Q ss_conf             0998999-9999985214885277113
Q gi|255764511|r   65 DRDPFAV-SCGQETMRDYKEQFSLFQA   90 (341)
Q Consensus        65 DrD~~ai-~~a~~~l~~~~~r~~~~~~   90 (341)
                      ..+++.+ ..+.+....-.+-+.+.-+
T Consensus        28 ~~t~~e~l~~~~~~~~~~aD~vElRlD   54 (258)
T 3js3_A           28 GKNKKDIIKEAKELKDACLDIIEWRVD   54 (258)
T ss_dssp             CSSHHHHHHHHHHHTTSSCSEEEEEGG
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf             899899999999873459998999860


No 318
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structural genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=30.12  E-value=26  Score=14.80  Aligned_cols=86  Identities=20%  Similarity=0.207  Sum_probs=57.9

Q ss_pred             CCCCCEEEECCCCCCHHHHH----HHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHH----HH-
Q ss_conf             38888899837688288999----99748909998099899999999852148852771132788---98765----31-
Q gi|255764511|r   34 PAPGKVILDATFGAGGYSRS----FCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYV----PD-  101 (341)
Q Consensus        34 ~~~~g~~iD~TlG~GGHS~~----iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l----~~-  101 (341)
                      |..|.+.| .|=|.+|==.+    +++.+.+|+..||+++.++...+.++.++.+...++..-.+   +..+.    .+ 
T Consensus         2 pL~GKv~l-ITG~s~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~l~~~~~~~~   80 (260)
T 2qq5_A            2 PMNGQVCV-VTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTTTCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf             99998899-95858699999999999879989999798899999999999649938999767899999999998646864


Q ss_pred             -CCCCEEEEECCCHHHHHHH
Q ss_conf             -2332478622520788876
Q gi|255764511|r  102 -KGVDGVVFDLGVSSMQIDC  120 (341)
Q Consensus       102 -~~vdgIl~DLGvSS~Qld~  120 (341)
                       ..+|.++.+-|+...+.-+
T Consensus        81 ~g~iDilVnnag~~~~~~~~  100 (260)
T 2qq5_A           81 QGRLDVLVNNAYAGVQTILN  100 (260)
T ss_dssp             TTCCCEEEECCCTTHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCCCC
T ss_conf             69876899706302444456


No 319
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=30.04  E-value=26  Score=14.79  Aligned_cols=76  Identities=16%  Similarity=0.110  Sum_probs=41.1

Q ss_pred             CEEEECCCCCCH-H-HHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHH---HHHHHHHHCCCCEEEEECC
Q ss_conf             889983768828-8-9999974890999809989999999985214885277113278---8987653123324786225
Q gi|255764511|r   38 KVILDATFGAGG-Y-SRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFS---QLQDYVPDKGVDGVVFDLG  112 (341)
Q Consensus        38 g~~iD~TlG~GG-H-S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~---~i~~~l~~~~vdgIl~DLG  112 (341)
                      .++|=|--|.=| | .+.+|+.+..|+++|++........+.. ...+++.++.+...   .+.+......++.|+.--+
T Consensus        11 kILVTGgtGfIGs~L~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~~~~~v~h~aa   89 (357)
T 1rkx_A           11 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA-RVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAA   89 (357)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHT-TTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHH-CCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEC
T ss_conf             8999689978999999999977998999978998617677654-014797699853689799999986148717898630


Q ss_pred             CH
Q ss_conf             20
Q gi|255764511|r  113 VS  114 (341)
Q Consensus       113 vS  114 (341)
                      .+
T Consensus        90 ~~   91 (357)
T 1rkx_A           90 QP   91 (357)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             57


No 320
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=29.90  E-value=26  Score=14.77  Aligned_cols=76  Identities=18%  Similarity=0.258  Sum_probs=46.6

Q ss_pred             CCCEEEECCCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHH----HCCC
Q ss_conf             8888998376882889----9999748909998099899999999852148852771132788---987653----1233
Q gi|255764511|r   36 PGKVILDATFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVP----DKGV  104 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~----~~~v  104 (341)
                      .|.+.| -|=|.+|==    +.+++.+.+|+..||+++.+..+.+.+..  .+..++..+.++   +.....    ..++
T Consensus        10 ~gKval-VTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~v~~~g~i   86 (254)
T 2wsb_A           10 DGACAA-VTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGA--AVAARIVADVTDAEAMTAAAAEAEAVAPV   86 (254)
T ss_dssp             TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG--GEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCC--CCEEEEEEECCCHHHHHHHHHHHHHHCCC
T ss_conf             999899-948887899999999998799999997988999999998478--85689997489999999999999966999


Q ss_pred             CEEEEECCCH
Q ss_conf             2478622520
Q gi|255764511|r  105 DGVVFDLGVS  114 (341)
Q Consensus       105 dgIl~DLGvS  114 (341)
                      |.++-+-|+.
T Consensus        87 DilVnnAG~~   96 (254)
T 2wsb_A           87 SILVNSAGIA   96 (254)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
T ss_conf             8999899889


No 321
>1s8n_A Putative antiterminator; structural genomics, transcriptional antiterminator, two component system, PSI; 1.48A {Mycobacterium tuberculosis H37RV} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=29.42  E-value=27  Score=14.72  Aligned_cols=55  Identities=11%  Similarity=0.039  Sum_probs=42.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCH
Q ss_conf             0999809989999999985214885277113278898765312332478622520
Q gi|255764511|r   60 NVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVS  114 (341)
Q Consensus        60 ~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvS  114 (341)
                      +|.-+|=|+......+..|+..+-++.-...+-.+.-+.+....+|-||.|+.+.
T Consensus        15 rILIVDDd~~~r~~l~~~L~~~G~~vv~~a~~g~eal~~~~~~~pDlillDi~MP   69 (205)
T 1s8n_A           15 RVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMP   69 (205)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEESSCS
T ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             8999829899999999999986997999989999999999837999999964045


No 322
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=29.34  E-value=27  Score=14.71  Aligned_cols=21  Identities=0%  Similarity=0.121  Sum_probs=12.5

Q ss_pred             HHHHHHHCCHHHHHHHHHHHC
Q ss_conf             899986222578998999744
Q gi|255764511|r  144 ASDVVNQANVKDLTRILGILG  164 (341)
Q Consensus       144 A~eiln~~s~~~L~~i~~~yG  164 (341)
                      ..++.+..+++.++-++-+..
T Consensus       516 ~~~i~~s~D~ea~~~llar~a  536 (768)
T 1m2o_A          516 TPAIAASFDQEAAAVLMARIA  536 (768)
T ss_dssp             CHHHHHTBCHHHHHHHHHHHH
T ss_pred             HHHHHHHCCHHHHHHHHHHHH
T ss_conf             799987339999999999999


No 323
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=28.84  E-value=27  Score=14.65  Aligned_cols=29  Identities=14%  Similarity=0.060  Sum_probs=14.5

Q ss_pred             CHHHHHHHHHHHHHCCCCCCEEEEEEECC
Q ss_conf             05789999998852024453389987255
Q gi|255764511|r  224 EIEELAQGLRSAEKALKAGGLLIVVSFHS  252 (341)
Q Consensus       224 El~~L~~~L~~~~~~L~~gGrl~VISFHS  252 (341)
                      -+..|..++.-+..++++||++..+-=-.
T Consensus       159 Ava~l~~ll~~~~~~lk~~g~~l~~KG~~  187 (249)
T 3g89_A          159 AVAPLCVLSELLLPFLEVGGAAVAMKGPR  187 (249)
T ss_dssp             SSCCHHHHHHHHGGGEEEEEEEEEEECSC
T ss_pred             CCCCHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             52549999998644316798999989999


No 324
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.82  E-value=19  Score=15.71  Aligned_cols=20  Identities=25%  Similarity=0.202  Sum_probs=16.8

Q ss_pred             HHCCHHHHHHHHHHHCCCCH
Q ss_conf             62225789989997446302
Q gi|255764511|r  149 NQANVKDLTRILGILGEEKQ  168 (341)
Q Consensus       149 n~~s~~~L~~i~~~yGee~~  168 (341)
                      ..|+|++|..+|..||+...
T Consensus        27 ~~~te~~L~~~F~~yG~V~~   46 (100)
T 2d9o_A           27 GGYSKDVLLRLLQKYGEVLN   46 (100)
T ss_dssp             CSCCHHHHHHHHHTTSCEEE
T ss_pred             CCCCHHHHHHHHHHCCCEEE
T ss_conf             99699999999974799559


No 325
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=28.81  E-value=27  Score=14.65  Aligned_cols=64  Identities=20%  Similarity=0.216  Sum_probs=38.0

Q ss_pred             CCCC--H--HHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEE-CCCHHHHHHHHHHCCCCEEEEECCCH
Q ss_conf             6882--8--899999748909998099899999999852148852771-13278898765312332478622520
Q gi|255764511|r   45 FGAG--G--YSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLF-QATFSQLQDYVPDKGVDGVVFDLGVS  114 (341)
Q Consensus        45 lG~G--G--HS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~-~~~F~~i~~~l~~~~vdgIl~DLGvS  114 (341)
                      +|+|  |  |+.+--+.+-+++++|.++++-..      .+.+.+... ..+...+.++....++|+|+...+-.
T Consensus        17 iG~Gqlgr~~a~Aak~lG~~v~~~~~~~~~p~~------~~ad~~~~~~~~D~e~l~~~a~~~~~d~v~~~~e~~   85 (391)
T 1kjq_A           17 LGSGELGKEVAIECQRLGVEVIAVDRYADAPAM------HVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEAI   85 (391)
T ss_dssp             ESCSHHHHHHHHHHHTTTCEEEEEESSTTCGGG------GGSSEEEECCTTCHHHHHHHHHHHCCSEEEECSSCS
T ss_pred             ECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHH------HHCCEEEEECCCCHHHHHHHHHHHCCCEEEECCCCH
T ss_conf             897899999999999879989999799998367------626636983688999999999984999999277745


No 326
>1nri_A Hypothetical protein HI0754; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=28.81  E-value=27  Score=14.65  Aligned_cols=26  Identities=12%  Similarity=0.065  Sum_probs=14.2

Q ss_pred             CCCHHHHHHHCCHHHHHHHHHHHCCC
Q ss_conf             84189998622257899899974463
Q gi|255764511|r  141 GISASDVVNQANVKDLTRILGILGEE  166 (341)
Q Consensus       141 ~~tA~eiln~~s~~~L~~i~~~yGee  166 (341)
                      +.+..=+||..+---+.+.=+.|++.
T Consensus       207 ~ta~k~iLn~ist~~~~~~gkv~~n~  232 (306)
T 1nri_A          207 GTAQKMVLNMLTTASMILLGKCYENL  232 (306)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSCBTTB
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             99999999999999999859865560


No 327
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, , isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=28.64  E-value=28  Score=14.63  Aligned_cols=69  Identities=14%  Similarity=0.200  Sum_probs=38.1

Q ss_pred             CEEEECCCCC-CHH-HHHHHHHCCEEEEECCC----HHHHHHHHHHHHHCCCCEEEECCC---HHHHHHHHHHCCCCEEE
Q ss_conf             8899837688-288-99999748909998099----899999999852148852771132---78898765312332478
Q gi|255764511|r   38 KVILDATFGA-GGY-SRSFCKMGSNVIALDRD----PFAVSCGQETMRDYKEQFSLFQAT---FSQLQDYVPDKGVDGVV  108 (341)
Q Consensus        38 g~~iD~TlG~-GGH-S~~iL~~~~~liaiDrD----~~ai~~a~~~l~~~~~r~~~~~~~---F~~i~~~l~~~~vdgIl  108 (341)
                      .++|=+--|. |.| .+.+|+++.+|+++|+=    ...+..... +  ...++.++..+   ...+.+++...++|.|+
T Consensus        13 ~ILITGatGFIGs~Lv~~Ll~~g~~V~~iD~l~~~~~~~~~~~~~-~--~~~~v~~i~~Di~d~~~l~~~~~~~~~D~Vi   89 (699)
T 1z45_A           13 IVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEV-L--TKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI   89 (699)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHH-H--HTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH-H--CCCCCEEEEEECCCHHHHHHHHHHCCCCEEE
T ss_conf             899958984899999999997869699998888773555655565-3--2378769996578999999999777999999


Q ss_pred             E
Q ss_conf             6
Q gi|255764511|r  109 F  109 (341)
Q Consensus       109 ~  109 (341)
                      -
T Consensus        90 H   90 (699)
T 1z45_A           90 H   90 (699)
T ss_dssp             E
T ss_pred             E
T ss_conf             8


No 328
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE; 1.76A {Sinorhizobium medicae WSM419}
Probab=28.13  E-value=28  Score=14.58  Aligned_cols=66  Identities=15%  Similarity=0.162  Sum_probs=46.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECC----CHHHHHHHHHH
Q ss_conf             8909998099899999999852148852771132788987653123324786225----20788876540
Q gi|255764511|r   58 GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLG----VSSMQIDCGDR  123 (341)
Q Consensus        58 ~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLG----vSS~Qld~~~R  123 (341)
                      +.+|.-+|=|+.........|+.++-++....+.-.-+..+.....+|.|+.|+.    .+-..+-..-|
T Consensus         5 ~~~ILiVDDd~~~~~~l~~~L~~~G~~v~~a~s~~eAl~~l~~~~~~dlvi~D~~~p~~~~G~el~~~ir   74 (132)
T 2rdm_A            5 AVTILLADDEAILLLDFESTLTDAGFLVTAVSSGAKAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAR   74 (132)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHH
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHH
T ss_conf             9989999799999999999999879999998999999999983899879987300589999999999999


No 329
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, MFE-1, fatty acid beta oxidation, oxidoreductase; 1.90A {Rattus norvegicus}
Probab=28.04  E-value=28  Score=14.57  Aligned_cols=31  Identities=26%  Similarity=0.562  Sum_probs=22.8

Q ss_pred             HHH--HHHHHHCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             889--9999748909998099899999999852
Q gi|255764511|r   49 GYS--RSFCKMGSNVIALDRDPFAVSCGQETMR   79 (341)
Q Consensus        49 GHS--~~iL~~~~~liaiDrD~~ai~~a~~~l~   79 (341)
                      |+.  ..++..+-.|+-+|.+++++..+.+++.
T Consensus        49 G~~IA~~~a~~G~~V~l~D~~~~~~~~~~~~i~   81 (463)
T 1zcj_A           49 GRGIAISFARVGISVVAVESDPKQLDAAKKIIT   81 (463)
T ss_dssp             HHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH
T ss_conf             999999998099947999699899999999999


No 330
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=27.99  E-value=28  Score=14.56  Aligned_cols=72  Identities=18%  Similarity=0.231  Sum_probs=47.7

Q ss_pred             CCCCCHHHH----HHHHHCCEEEEECCCHHHHHHHH-HHHHHCCCCEEEECCCHHHH---HHHHHH-----CCCCEEEEE
Q ss_conf             768828899----99974890999809989999999-98521488527711327889---876531-----233247862
Q gi|255764511|r   44 TFGAGGYSR----SFCKMGSNVIALDRDPFAVSCGQ-ETMRDYKEQFSLFQATFSQL---QDYVPD-----KGVDGVVFD  110 (341)
Q Consensus        44 TlG~GGHS~----~iL~~~~~liaiDrD~~ai~~a~-~~l~~~~~r~~~~~~~F~~i---~~~l~~-----~~vdgIl~D  110 (341)
                      |-|.+|==+    .+++.+.+|+..|++++.+..+. +..+.++.++.++..+.++-   .+.+..     .++|.++-+
T Consensus         8 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnn   87 (250)
T 2cfc_A            8 TGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNN   87 (250)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf             17897899999999998799899998988899999999998549948999940799999999999999975999799989


Q ss_pred             CCCHH
Q ss_conf             25207
Q gi|255764511|r  111 LGVSS  115 (341)
Q Consensus       111 LGvSS  115 (341)
                      =|++.
T Consensus        88 AGi~~   92 (250)
T 2cfc_A           88 AGITG   92 (250)
T ss_dssp             CCCCC
T ss_pred             CCCCC
T ss_conf             97688


No 331
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=27.75  E-value=29  Score=14.53  Aligned_cols=65  Identities=9%  Similarity=0.134  Sum_probs=41.0

Q ss_pred             HHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCH---HHHHHHHH----H-CCCCEEEEECCCH
Q ss_conf             88999997489099980998999999998521488527711327---88987653----1-2332478622520
Q gi|255764511|r   49 GYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATF---SQLQDYVP----D-KGVDGVVFDLGVS  114 (341)
Q Consensus        49 GHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F---~~i~~~l~----~-~~vdgIl~DLGvS  114 (341)
                      .-++.+++.+.+|+..|+++...+.+++...... ....+....   ..+.+.+.    . ..+|.++...|+.
T Consensus        23 aiA~~la~~G~~V~i~~r~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~   95 (275)
T 2pd4_A           23 GIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFA   95 (275)
T ss_dssp             HHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCC
T ss_pred             HHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCC-CCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             9999999879999999688799999999985368-835998414537899999999999819988899535433


No 332
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=27.52  E-value=29  Score=14.51  Aligned_cols=56  Identities=4%  Similarity=0.112  Sum_probs=43.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCH
Q ss_conf             890999809989999999985214885277113278898765312332478622520
Q gi|255764511|r   58 GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVS  114 (341)
Q Consensus        58 ~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvS  114 (341)
                      .+++.-+|-|+.........|+..+-++....+.- +.-+.+....+|-|+.|+.+.
T Consensus         3 ~p~ILiVdDd~~~~~~l~~~L~~~g~~v~~a~~~~-~al~~l~~~~~dlii~D~~lP   58 (123)
T 1xhf_A            3 TPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGA-EMHQILSEYDINLVIMDINLP   58 (123)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHTTTCEEEEESSHH-HHHHHHHHSCCSEEEECSSCS
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHH-HHHHHHHCCCCCEEEEECCCC
T ss_conf             99999996999999999999998799999989999-999999708999999968999


No 333
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Vibrio parahaemolyticus AQ3810}
Probab=27.30  E-value=29  Score=14.48  Aligned_cols=60  Identities=10%  Similarity=0.104  Sum_probs=34.5

Q ss_pred             HHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECC---CHHHHHHHHHHC--CCCEEEEECCC
Q ss_conf             9999974890999809989999999985214885277113---278898765312--33247862252
Q gi|255764511|r   51 SRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQA---TFSQLQDYVPDK--GVDGVVFDLGV  113 (341)
Q Consensus        51 S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~---~F~~i~~~l~~~--~vdgIl~DLGv  113 (341)
                      ++.+.+.+.+|+..||+++-++...+.+   ..++..+..   +...+.+.+...  .+|.++..-|+
T Consensus        18 A~~la~~G~~V~l~~R~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~d~linnaG~   82 (230)
T 3guy_A           18 AKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAGS   82 (230)
T ss_dssp             HHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCCC
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHH---CCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf             9999987998999989999999999985---4346889700699999999999858838799986875


No 334
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=27.25  E-value=29  Score=14.48  Aligned_cols=73  Identities=15%  Similarity=0.197  Sum_probs=41.0

Q ss_pred             CCCCH----HHHHHHHHC--CEEEE-ECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHH
Q ss_conf             68828----899999748--90999-809989999999985214885277113278898765312332478622520788
Q gi|255764511|r   45 FGAGG----YSRSFCKMG--SNVIA-LDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVSSMQ  117 (341)
Q Consensus        45 lG~GG----HS~~iL~~~--~~lia-iDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvSS~Q  117 (341)
                      +|.|.    |..+++...  .+|+| .|++++..+...+   +|+....    .|+++++++....+|+|+.= .....|
T Consensus         8 iG~G~~g~~h~~~~~~~~~~~~l~~v~d~~~~~~~~~~~---~~~~~~~----~~~~~~~ll~~~~~D~V~i~-tp~~~H   79 (344)
T 3mz0_A            8 IGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVE---QYQLNAT----VYPNDDSLLADENVDAVLVT-SWGPAH   79 (344)
T ss_dssp             ECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHH---HTTCCCE----EESSHHHHHHCTTCCEEEEC-SCGGGH
T ss_pred             ECCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH---HHCCCCC----EECCHHHHHCCCCCCEEEEC-CCCCCH
T ss_conf             998299999999998428996899998999999999999---8589980----67999999559998889962-652115


Q ss_pred             HHHHHHCC
Q ss_conf             87654073
Q gi|255764511|r  118 IDCGDRGF  125 (341)
Q Consensus       118 ld~~~RGF  125 (341)
                      .+-.....
T Consensus        80 ~~~~~~al   87 (344)
T 3mz0_A           80 ESSVLKAI   87 (344)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
T ss_conf             99999998


No 335
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative; 2.00A {Streptococcus agalactiae serogroup V}
Probab=27.14  E-value=27  Score=14.73  Aligned_cols=76  Identities=14%  Similarity=0.232  Sum_probs=41.6

Q ss_pred             HHHHHHHHC-CEEEE-ECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHHHH----HHH
Q ss_conf             899999748-90999-809989999999985214885277113278898765312332478622520788876----540
Q gi|255764511|r   50 YSRSFCKMG-SNVIA-LDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVSSMQIDC----GDR  123 (341)
Q Consensus        50 HS~~iL~~~-~~lia-iDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvSS~Qld~----~~R  123 (341)
                      |..++.... ..|+| .|+|++....       +..++-+ ...|+++++++...++|+|+.-.-.+ .|++-    -++
T Consensus        20 h~~~l~~~~~~~v~~v~d~~~~~~~~-------~a~~~~~-~~~~~~~~~ll~~~~~D~V~I~tp~~-~H~~~~~~al~~   90 (329)
T 3evn_A           20 FIEGVRLAGNGEVVAVSSRTLESAQA-------FANKYHL-PKAYDKLEDMLADESIDVIYVATINQ-DHYKVAKAALLA   90 (329)
T ss_dssp             HHHHHHHHCSEEEEEEECSCSSTTCC----------CCCC-SCEESCHHHHHTCTTCCEEEECSCGG-GHHHHHHHHHHT
T ss_pred             HHHHHHHCCCCEEEEEECCCHHHHHH-------HHHHCCC-CCEECCHHHHHCCCCCCEEEECCCHH-HHHHHHHHHHHC
T ss_conf             99999868992899998899999999-------9998599-80668999996288988899058266-555778999987


Q ss_pred             CCCCCCCCCEE
Q ss_conf             73445664101
Q gi|255764511|r  124 GFSFQKSGPLD  134 (341)
Q Consensus       124 GFSf~~dgpLD  134 (341)
                      |-..--+-|+-
T Consensus        91 gk~vl~EKP~a  101 (329)
T 3evn_A           91 GKHVLVEKPFT  101 (329)
T ss_dssp             TCEEEEESSCC
T ss_pred             CCEEEEEECCC
T ss_conf             99899972454


No 336
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=26.96  E-value=30  Score=14.44  Aligned_cols=72  Identities=13%  Similarity=0.114  Sum_probs=44.6

Q ss_pred             CCCCCCHH----HHHHHHHCCEEEEECCCHHHHHHHHHHHHHC---CCCEEEECCC---HHHHHHHHHH-----CCCCEE
Q ss_conf             37688288----9999974890999809989999999985214---8852771132---7889876531-----233247
Q gi|255764511|r   43 ATFGAGGY----SRSFCKMGSNVIALDRDPFAVSCGQETMRDY---KEQFSLFQAT---FSQLQDYVPD-----KGVDGV  107 (341)
Q Consensus        43 ~TlG~GGH----S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~---~~r~~~~~~~---F~~i~~~l~~-----~~vdgI  107 (341)
                      -|-|.+|=    ++.+++.+.+|+.+||+++.++...+.+...   ..++.++...   .+.+...+..     ..+|.+
T Consensus        12 ITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDiL   91 (250)
T 3nyw_A           12 ITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDIL   91 (250)
T ss_dssp             EESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCEEEE
T ss_pred             EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEE
T ss_conf             95697399999999999879989999898999999999999835888745899801899999999999999981996399


Q ss_pred             EEECCCH
Q ss_conf             8622520
Q gi|255764511|r  108 VFDLGVS  114 (341)
Q Consensus       108 l~DLGvS  114 (341)
                      +-.-|++
T Consensus        92 VnnAG~~   98 (250)
T 3nyw_A           92 VNAAAMF   98 (250)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
T ss_conf             9876347


No 337
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold; HET: 1PE MES; 1.80A {Aquifex aeolicus VF5} PDB: 2p68_A*
Probab=26.93  E-value=30  Score=14.44  Aligned_cols=78  Identities=22%  Similarity=0.270  Sum_probs=51.5

Q ss_pred             CCCEEEECCCCCCHHHHH----HHHHCCEEEEECCCHHHHHHHHHHH-HHCCCCEEEECCCHHH---HHHHHH----H-C
Q ss_conf             888899837688288999----9974890999809989999999985-2148852771132788---987653----1-2
Q gi|255764511|r   36 PGKVILDATFGAGGYSRS----FCKMGSNVIALDRDPFAVSCGQETM-RDYKEQFSLFQATFSQ---LQDYVP----D-K  102 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS~~----iL~~~~~liaiDrD~~ai~~a~~~l-~~~~~r~~~~~~~F~~---i~~~l~----~-~  102 (341)
                      .|.+.| -|=|.+|==++    +++.+.+|+..||+++.+..+.+.+ +.++.++.++..+.++   +.+.+.    . .
T Consensus         6 ~gK~al-VTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   84 (248)
T 2pnf_A            6 QGKVSL-VTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             TTCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCC
T ss_conf             999899-9377878999999999987998999979889999999999886299389998678999999999999999749


Q ss_pred             CCCEEEEECCCH
Q ss_conf             332478622520
Q gi|255764511|r  103 GVDGVVFDLGVS  114 (341)
Q Consensus       103 ~vdgIl~DLGvS  114 (341)
                      ++|.++-+-|+.
T Consensus        85 ~iDiLVnnAG~~   96 (248)
T 2pnf_A           85 GIDILVNNAGIT   96 (248)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
T ss_conf             987999899889


No 338
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=26.24  E-value=30  Score=14.36  Aligned_cols=23  Identities=22%  Similarity=0.270  Sum_probs=15.8

Q ss_pred             CCCCHHHHHHHHH----CCEEEEECCC
Q ss_conf             6882889999974----8909998099
Q gi|255764511|r   45 FGAGGYSRSFCKM----GSNVIALDRD   67 (341)
Q Consensus        45 lG~GGHS~~iL~~----~~~liaiDrD   67 (341)
                      +|+|||++.+++.    +-.+++|.-|
T Consensus         9 ~Gagg~~~~v~di~~~~~~~~~~f~Dd   35 (194)
T 3bfp_A            9 YGASGHGLVCEDVAKNMGYKECIFLDD   35 (194)
T ss_dssp             EC--CHHHHHHHHHHHHTCSEEEEEC-
T ss_pred             ECCCHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             948787999999998689938999919


No 339
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=26.18  E-value=30  Score=14.35  Aligned_cols=57  Identities=16%  Similarity=0.067  Sum_probs=41.8

Q ss_pred             HCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCH
Q ss_conf             4890999809989999999985214885277113278898765312332478622520
Q gi|255764511|r   57 MGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVS  114 (341)
Q Consensus        57 ~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvS  114 (341)
                      +.|+|+-+|=|+.....-...|+..+-.+.... +-.+....+....+|-|+.|+.+.
T Consensus         2 a~P~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~-~~~~al~~l~~~~~dliilD~~mP   58 (155)
T 1qkk_A            2 AAPSVFLIDDDRDLRKAMQQTLELAGFTVSSFA-SATEALAGLSADFAGIVISDIRMP   58 (155)
T ss_dssp             --CEEEEECSCHHHHHHHHHHHHHTTCEEEEES-CHHHHHHTCCTTCCSEEEEESCCS
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEC-CHHHHHHHHHCCCCCEEECCCCCC
T ss_conf             999899995999999999999998799899978-999999985326987776545789


No 340
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=25.66  E-value=31  Score=14.29  Aligned_cols=78  Identities=17%  Similarity=0.211  Sum_probs=50.9

Q ss_pred             CCCEEEECCCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHHHH-HCCCCEEEECCCHHHH---HHHHHH-----C
Q ss_conf             8888998376882889----9999748909998099899999999852-1488527711327889---876531-----2
Q gi|255764511|r   36 PGKVILDATFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQETMR-DYKEQFSLFQATFSQL---QDYVPD-----K  102 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~l~-~~~~r~~~~~~~F~~i---~~~l~~-----~  102 (341)
                      .|.+.| -|-|.+|==    +.+++.+.+|+..|++++.+..+.+.+. .++.++..+..+.++-   ...+..     .
T Consensus        25 ~GKval-VTGgs~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~~g~~~~~~~~Dls~~~~v~~~~~~~~~~~G  103 (302)
T 1w6u_A           25 QGKVAF-ITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCC
T ss_conf             999899-9379868999999999987998999979888999999999886399289999328999999999999999819


Q ss_pred             CCCEEEEECCCH
Q ss_conf             332478622520
Q gi|255764511|r  103 GVDGVVFDLGVS  114 (341)
Q Consensus       103 ~vdgIl~DLGvS  114 (341)
                      .+|.++-.-|+.
T Consensus       104 ~iDiLVnnAg~~  115 (302)
T 1w6u_A          104 HPNIVINNAAGN  115 (302)
T ss_dssp             SCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
T ss_conf             987899777434


No 341
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=25.29  E-value=23  Score=15.12  Aligned_cols=80  Identities=14%  Similarity=0.101  Sum_probs=42.0

Q ss_pred             CEEEECCCCC-CHH-HHHHHHHCCEEEEECCCHHHHHHHHHHHH-HCCCCEEEECCCHHHHHHHHH-HCCCCEEEEECCC
Q ss_conf             8899837688-288-99999748909998099899999999852-148852771132788987653-1233247862252
Q gi|255764511|r   38 KVILDATFGA-GGY-SRSFCKMGSNVIALDRDPFAVSCGQETMR-DYKEQFSLFQATFSQLQDYVP-DKGVDGVVFDLGV  113 (341)
Q Consensus        38 g~~iD~TlG~-GGH-S~~iL~~~~~liaiDrD~~ai~~a~~~l~-~~~~r~~~~~~~F~~i~~~l~-~~~vdgIl~DLGv  113 (341)
                      -++|=+--|. |.| .+.+|+.+-+|+|+.||++.......... ....++.++..+..+...+.. ..+++.++.....
T Consensus        11 ~vlVTGatGfIG~~l~~~Ll~~g~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~   90 (338)
T 2rh8_A           11 TACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVATP   90 (338)
T ss_dssp             EEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEESSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCC
T ss_conf             89997797399999999999786989999888740788886774145787399975344224445422576431000023


Q ss_pred             HHHH
Q ss_conf             0788
Q gi|255764511|r  114 SSMQ  117 (341)
Q Consensus       114 SS~Q  117 (341)
                      .+..
T Consensus        91 ~~~~   94 (338)
T 2rh8_A           91 VHFA   94 (338)
T ss_dssp             CCC-
T ss_pred             CCCC
T ss_conf             2222


No 342
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide formyl transferase; purine ribonucleotide biosynthesis, PURT; HET: ADP; 1.70A {Pyrococcus horikoshii OT3} PDB: 2czg_A*
Probab=25.18  E-value=32  Score=14.24  Aligned_cols=64  Identities=19%  Similarity=0.234  Sum_probs=38.3

Q ss_pred             CCCC--H--HHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEC-CCHHHHHHHHHHCCCCEEEEECCCH
Q ss_conf             6882--8--8999997489099980998999999998521488527711-3278898765312332478622520
Q gi|255764511|r   45 FGAG--G--YSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQ-ATFSQLQDYVPDKGVDGVVFDLGVS  114 (341)
Q Consensus        45 lG~G--G--HS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~-~~F~~i~~~l~~~~vdgIl~DLGvS  114 (341)
                      +|+|  |  ++.+--+.+-+++.+|.++++-..  +    +.+++.... .+...+.+++...++|+|+...+--
T Consensus        25 lG~Gqlgr~la~aA~~lG~~v~v~d~~~~~pa~--~----~ad~~~~~~~~D~e~l~~~a~~~~~d~v~~~~e~~   93 (433)
T 2dwc_A           25 LGSGELGKEIAIEAQRLGVEVVAVDRYANAPAM--Q----VAHRSYVGNMMDKDFLWSVVEREKPDAIIPEIEAI   93 (433)
T ss_dssp             ESCSHHHHHHHHHHHHTTCEEEEEESSTTCHHH--H----HSSEEEESCTTCHHHHHHHHHHHCCSEEEECSSCS
T ss_pred             ECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHH--H----HCCEEEECCCCCHHHHHHHHHHHCCCEEEECCCCC
T ss_conf             998899999999999869989999797988677--7----35558977999999999999982999999797866


No 343
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=25.11  E-value=32  Score=14.23  Aligned_cols=71  Identities=18%  Similarity=0.259  Sum_probs=45.6

Q ss_pred             CCCCCHH----HHHHHHHCCEEEEECCCHHHHHHHHHHHHH-----CCCCEEEECCCHHH---HHHHHHH-----CCCCE
Q ss_conf             7688288----999997489099980998999999998521-----48852771132788---9876531-----23324
Q gi|255764511|r   44 TFGAGGY----SRSFCKMGSNVIALDRDPFAVSCGQETMRD-----YKEQFSLFQATFSQ---LQDYVPD-----KGVDG  106 (341)
Q Consensus        44 TlG~GGH----S~~iL~~~~~liaiDrD~~ai~~a~~~l~~-----~~~r~~~~~~~F~~---i~~~l~~-----~~vdg  106 (341)
                      |-|.+|=    ++.+++.+.+|+..|++++.+..+.+.+..     .+.++..+..+.++   +.+.+..     ..+|.
T Consensus        24 TGgs~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvt~~~~v~~~v~~~~~~~G~iDi  103 (303)
T 1yxm_A           24 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINF  103 (303)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCE
T ss_conf             38986899999999998799899997988999999999984304256965999974589999999999999997399989


Q ss_pred             EEEECCCH
Q ss_conf             78622520
Q gi|255764511|r  107 VVFDLGVS  114 (341)
Q Consensus       107 Il~DLGvS  114 (341)
                      ++-+-|+.
T Consensus       104 LVnnAg~~  111 (303)
T 1yxm_A          104 LVNNGGGQ  111 (303)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
T ss_conf             99899899


No 344
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=24.93  E-value=32  Score=14.21  Aligned_cols=66  Identities=9%  Similarity=-0.054  Sum_probs=41.8

Q ss_pred             CCCCHHHHHHHH----HCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH--HHCCCCEEEEECC
Q ss_conf             688288999997----4890999809989999999985214885277113278898765--3123324786225
Q gi|255764511|r   45 FGAGGYSRSFCK----MGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYV--PDKGVDGVVFDLG  112 (341)
Q Consensus        45 lG~GGHS~~iL~----~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l--~~~~vdgIl~DLG  112 (341)
                      +|+|.-+..+++    .+..++.+|.||+......+..  +...+.++++++.+-..+.  .-.+.+++++-.+
T Consensus         9 ~G~g~~g~~l~~~L~~~~~~v~vId~~~e~~~~~~~~~--~~~~~~vi~GD~~~~~~L~~a~i~~a~~vi~~t~   80 (153)
T 1id1_A            9 CGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR--LGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             ECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH--HCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH--HCCCCEEEEECCCCHHHHHHCCCCCCCEEEECCC
T ss_conf             89888999999999977998899978867789999985--4389879991679999997579883389999869


No 345
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics, protein structure initiative; 2.89A {Clostridium difficile 630}
Probab=24.61  E-value=33  Score=14.17  Aligned_cols=57  Identities=9%  Similarity=0.068  Sum_probs=42.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCHH
Q ss_conf             8909998099899999999852148852771132788987653123324786225207
Q gi|255764511|r   58 GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVSS  115 (341)
Q Consensus        58 ~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvSS  115 (341)
                      ..+++-+|-|+.........|+..+-.+.... +-.+.-+.+....+|-|++|+.+..
T Consensus         4 ~~kILiVDDd~~~~~~l~~~L~~~g~~v~~a~-~~~eal~~l~~~~~dlillD~~mP~   60 (136)
T 2qzj_A            4 QTKILIIDGDKDNCQKLKGFLEEKGISIDLAY-NCEEAIGKIFSNKYDLIFLEIILSD   60 (136)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHTTTCEEEEES-SHHHHHHHHHHCCCSEEEEESEETT
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEEC-CHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf             77599998999999999999998799999989-9999999886279999997799989


No 346
>3hdv_A Response regulator; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.09A {Pseudomonas putida KT2440}
Probab=24.47  E-value=33  Score=14.15  Aligned_cols=59  Identities=8%  Similarity=-0.057  Sum_probs=41.3

Q ss_pred             HHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCH
Q ss_conf             74890999809989999999985214885277113278898765312332478622520
Q gi|255764511|r   56 KMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVS  114 (341)
Q Consensus        56 ~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvS  114 (341)
                      ..-++|.-+|=|+.........|+.++-.+....+.-.-+..+.....+|-|+.|+.+.
T Consensus         5 ~~r~~ILiVDD~~~~r~~l~~~L~~~G~~v~~a~~~~~a~~~l~~~~~~dlii~D~~mP   63 (136)
T 3hdv_A            5 AARPLVLVVDDNAVNREALILYLKSRGIDAVGADGAEEARLYLHYQKRIGLMITDLRMQ   63 (136)
T ss_dssp             --CCEEEEECSCHHHHHHHHHHHHHTTCCEEEESSHHHHHHHHHHCTTEEEEEECSCCS
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf             99988999979999999999999987999999899999999997579998899879899


No 347
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=24.42  E-value=33  Score=14.14  Aligned_cols=75  Identities=25%  Similarity=0.302  Sum_probs=48.3

Q ss_pred             CCCEEEECCCCCCHHHHH----HHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHH---HHHHHHHH-----CC
Q ss_conf             888899837688288999----9974890999809989999999985214885277113278---89876531-----23
Q gi|255764511|r   36 PGKVILDATFGAGGYSRS----FCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFS---QLQDYVPD-----KG  103 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS~~----iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~---~i~~~l~~-----~~  103 (341)
                      .|.+.| -|-|.+|==++    +++.+.+|+..|++++.++...+.+   +.++.++..+.+   ++...+..     ..
T Consensus        28 ~GKval-VTGas~GIG~aiA~~la~~Ga~V~~~~~~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~  103 (277)
T 3gvc_A           28 AGKVAI-VTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAFGG  103 (277)
T ss_dssp             TTCEEE-ETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH---CCCEEEEEEECCCHHHHHHHHHHHHHHCCC
T ss_conf             999899-9387878999999999987999999979889999999982---996489996389999999999999997399


Q ss_pred             CCEEEEECCCH
Q ss_conf             32478622520
Q gi|255764511|r  104 VDGVVFDLGVS  114 (341)
Q Consensus       104 vdgIl~DLGvS  114 (341)
                      +|.++-+-|+.
T Consensus       104 iDiLVnNAG~~  114 (277)
T 3gvc_A          104 VDKLVANAGVV  114 (277)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
T ss_conf             98999899889


No 348
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92, PSI-2; 2.10A {Neptuniibacter caesariensis}
Probab=24.38  E-value=33  Score=14.14  Aligned_cols=54  Identities=9%  Similarity=0.087  Sum_probs=40.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCH
Q ss_conf             0999809989999999985214885277113278898765312332478622520
Q gi|255764511|r   60 NVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVS  114 (341)
Q Consensus        60 ~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvS  114 (341)
                      +|+-+|=|+......+..|+.++-.+.. -.+-.+.-+.+....+|.|+.|+.+.
T Consensus         9 ~ILiVDDd~~~~~~l~~~L~~~g~~v~~-a~~~~~Al~~l~~~~~dliilD~~mp   62 (154)
T 2rjn_A            9 TVMLVDDEQPILNSLKRLIKRLGCNIIT-FTSPLDALEALKGTSVQLVISDMRMP   62 (154)
T ss_dssp             EEEEECSCHHHHHHHHHHHHTTTCEEEE-ESCHHHHHHHHTTSCCSEEEEESSCS
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEEEE-ECCHHHHHHHHHCCCCCEEEECCCCC
T ss_conf             8999979999999999999987998999-89999999998628998899668888


No 349
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, short chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=24.32  E-value=33  Score=14.13  Aligned_cols=79  Identities=22%  Similarity=0.216  Sum_probs=53.1

Q ss_pred             CCCCEEEECCCCCCHHHHH----HHHHCCEEEE-ECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHH---HHHH----H-
Q ss_conf             8888899837688288999----9974890999-809989999999985214885277113278898---7653----1-
Q gi|255764511|r   35 APGKVILDATFGAGGYSRS----FCKMGSNVIA-LDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQ---DYVP----D-  101 (341)
Q Consensus        35 ~~~g~~iD~TlG~GGHS~~----iL~~~~~lia-iDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~---~~l~----~-  101 (341)
                      ..|.+ +=-|=|.+|==++    +++.+.+|+. .+++++..+...+.+++++.++.++..+.++-+   ..+.    . 
T Consensus        19 L~GKv-alVTGas~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   97 (274)
T 1ja9_A           19 LAGKV-ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   97 (274)
T ss_dssp             TTTCE-EEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCE-EEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf             99998-99968886899999999998799899972898789999999999739958999824899999999999999982


Q ss_pred             CCCCEEEEECCCH
Q ss_conf             2332478622520
Q gi|255764511|r  102 KGVDGVVFDLGVS  114 (341)
Q Consensus       102 ~~vdgIl~DLGvS  114 (341)
                      .++|.++-+-|+.
T Consensus        98 G~iDiLVnnAG~~  110 (274)
T 1ja9_A           98 GGLDFVMSNSGME  110 (274)
T ss_dssp             SCEEEEECCCCCC
T ss_pred             CCCCEEEECCCCC
T ss_conf             9987999786036


No 350
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=24.01  E-value=33  Score=14.10  Aligned_cols=39  Identities=18%  Similarity=0.280  Sum_probs=27.0

Q ss_pred             HHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHC
Q ss_conf             8999999885202445338998725502389999998641
Q gi|255764511|r  227 ELAQGLRSAEKALKAGGLLIVVSFHSLEDRLVKKFFASRS  266 (341)
Q Consensus       227 ~L~~~L~~~~~~L~~gGrl~VISFHSLEDRiVK~ff~~~~  266 (341)
                      -|.-+=.++...|+|||-++++.|-= -||.-.+..-..+
T Consensus       232 ~l~mL~~~al~~L~pGGt~v~~aYGy-ADR~SE~vv~alA  270 (320)
T 2hwk_A          232 KLSMLTKKACLHLNPGGTCVSIGYGY-ADRASESIIGAIA  270 (320)
T ss_dssp             HHHHTHHHHGGGEEEEEEEEEEECCC-CSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCEEEEEEEEC-CCCHHHHHHHHHH
T ss_conf             99887788985038984599986303-4220688999987


No 351
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=23.89  E-value=34  Score=14.08  Aligned_cols=29  Identities=17%  Similarity=0.450  Sum_probs=23.2

Q ss_pred             CCCHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             34057899999988520244533899872
Q gi|255764511|r  222 NNEIEELAQGLRSAEKALKAGGLLIVVSF  250 (341)
Q Consensus       222 N~El~~L~~~L~~~~~~L~~gGrl~VISF  250 (341)
                      -.-.++...++..+..+|+|||.|+++.+
T Consensus       188 ~~~~~~~~~~~~~~~~lLkpGG~li~~~~  216 (289)
T 2g72_A          188 SPDLASFQRALDHITTLLRPGGHLLLIGA  216 (289)
T ss_dssp             CSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf             79889999999999997579968999996


No 352
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=23.25  E-value=35  Score=14.00  Aligned_cols=57  Identities=21%  Similarity=0.269  Sum_probs=35.0

Q ss_pred             EEEECCCCC-CHH-HHHHHHHCCEEEEECCCHHHHHHHHHHHHHC--CCCEEEECCCHHHH
Q ss_conf             899837688-288-9999974890999809989999999985214--88527711327889
Q gi|255764511|r   39 VILDATFGA-GGY-SRSFCKMGSNVIALDRDPFAVSCGQETMRDY--KEQFSLFQATFSQL   95 (341)
Q Consensus        39 ~~iD~TlG~-GGH-S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~--~~r~~~~~~~F~~i   95 (341)
                      ++|=+--|. |.| .+.+++.+-.|++++||+.-.......+.-.  .+++.++.....+.
T Consensus         8 VlITGatGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~   68 (337)
T 2c29_D            8 VCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADE   68 (337)
T ss_dssp             EEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTST
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCH
T ss_conf             9998898699999999999783989999788652788998874015667659996505562


No 353
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=22.78  E-value=35  Score=13.94  Aligned_cols=56  Identities=11%  Similarity=0.122  Sum_probs=42.1

Q ss_pred             HCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             489099980998999999998521488527711327889876531233247862252
Q gi|255764511|r   57 MGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGV  113 (341)
Q Consensus        57 ~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGv  113 (341)
                      +.++|.-+|-|+.........|+.++-.+.... +-.+--+.+....+|-|+.|+.+
T Consensus        13 ~kp~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~-~~~eAl~~l~~~~~dlvi~D~~m   68 (153)
T 3hv2_A           13 RRPEILLVDSQEVILQRLQQLLSPLPYTLHFAR-DATQALQLLASREVDLVISAAHL   68 (153)
T ss_dssp             SCCEEEEECSCHHHHHHHHHHHTTSSCEEEEES-SHHHHHHHHHHSCCSEEEEESCC
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEC-CHHHHHHHHHHCCCCEEEEECCC
T ss_conf             999799997999999999999998799999989-99999999872799999983678


No 354
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=22.63  E-value=36  Score=13.92  Aligned_cols=73  Identities=14%  Similarity=0.227  Sum_probs=47.7

Q ss_pred             CCCCCCHHH----HHHHHHCCEEEEECCCH-HHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHHH-----CCCCEEEE
Q ss_conf             376882889----99997489099980998-99999999852148852771132788---9876531-----23324786
Q gi|255764511|r   43 ATFGAGGYS----RSFCKMGSNVIALDRDP-FAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVPD-----KGVDGVVF  109 (341)
Q Consensus        43 ~TlG~GGHS----~~iL~~~~~liaiDrD~-~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~~-----~~vdgIl~  109 (341)
                      -|=|.+|==    +.+++.+.+|+..|++. +.++...+.++.++.++.++..+.++   +.+.+..     .++|.++-
T Consensus        10 ITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVn   89 (247)
T 2hq1_A           10 VTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVN   89 (247)
T ss_dssp             ESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             93798689999999999879989999488367999999999854995899984799999999999999997599989998


Q ss_pred             ECCCHH
Q ss_conf             225207
Q gi|255764511|r  110 DLGVSS  115 (341)
Q Consensus       110 DLGvSS  115 (341)
                      +=|++.
T Consensus        90 nAG~~~   95 (247)
T 2hq1_A           90 NAGITR   95 (247)
T ss_dssp             CC----
T ss_pred             CCCCCC
T ss_conf             999999


No 355
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genomics, protein structure initiative, PSI; HET: NAD; 1.95A {Listeria innocua}
Probab=22.60  E-value=36  Score=13.92  Aligned_cols=78  Identities=14%  Similarity=0.172  Sum_probs=41.4

Q ss_pred             CCCHHHHHHHH---HCC--EEEE-ECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHHH
Q ss_conf             88288999997---489--0999-80998999999998521488527711327889876531233247862252078887
Q gi|255764511|r   46 GAGGYSRSFCK---MGS--NVIA-LDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVSSMQID  119 (341)
Q Consensus        46 G~GGHS~~iL~---~~~--~lia-iDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvSS~Qld  119 (341)
                      |.|+-....+.   ..+  .|+| .|+++++.+.+.    ++.  +.    -|.++.+++....+|+|+.=.-. +.|.+
T Consensus        12 G~G~~g~~h~~~~~~~~~~~l~av~d~~~~~~~~~~----~~~--~~----~~~~~~ell~~~~iD~V~i~tp~-~~h~~   80 (359)
T 3e18_A           12 GYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAA----QKG--LK----IYESYEAVLADEKVDAVLIATPN-DSHKE   80 (359)
T ss_dssp             CCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHH----TTT--CC----BCSCHHHHHHCTTCCEEEECSCG-GGHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH----HCC--CC----CCCCHHHHHCCCCCCEEEECCCC-HHHHH
T ss_conf             467999999999985899589999889999999998----629--97----01999999559998989987880-55235


Q ss_pred             H----HHHCCCCCCCCCEE
Q ss_conf             6----54073445664101
Q gi|255764511|r  120 C----GDRGFSFQKSGPLD  134 (341)
Q Consensus       120 ~----~~RGFSf~~dgpLD  134 (341)
                      -    -+.|-..--+-|+-
T Consensus        81 ~~~~al~~gkhv~~EKP~a   99 (359)
T 3e18_A           81 LAISALEAGKHVVCEKPVT   99 (359)
T ss_dssp             HHHHHHHTTCEEEEESSCC
T ss_pred             HHHHHHHCCCEEEEECCCC
T ss_conf             6788885398199957864


No 356
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reductase family; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp}
Probab=22.55  E-value=36  Score=13.91  Aligned_cols=61  Identities=10%  Similarity=0.030  Sum_probs=36.1

Q ss_pred             HHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHHH-----CCCCEEEEECCCH
Q ss_conf             99999748909998099899999999852148852771132788---9876531-----2332478622520
Q gi|255764511|r   51 SRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVPD-----KGVDGVVFDLGVS  114 (341)
Q Consensus        51 S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~~-----~~vdgIl~DLGvS  114 (341)
                      ++.+++.+.+|+..|||++.++...+.+   ++++..+..+.++   ++..+..     ..+|.++-.-|+.
T Consensus        20 a~~la~~G~~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilinnAG~~   88 (235)
T 3l6e_A           20 TIGLVERGHQVSMMGRRYQRLQQQELLL---GNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTG   88 (235)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHC---CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             9999987998999989899999999973---99669998578999999999999999779956999788777


No 357
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; NP_070841.1, 3-hydroxyacyl-COA dehydrogenase (HBD-9), structural genomics; HET: PE8; 2.00A {Archaeoglobus fulgidus dsm 4304}
Probab=22.03  E-value=36  Score=13.85  Aligned_cols=40  Identities=13%  Similarity=0.160  Sum_probs=27.1

Q ss_pred             HHHHHHH-HHCCEEEEECCCHHHHHHHHHHHHHC-CCCEEEE
Q ss_conf             8899999-74890999809989999999985214-8852771
Q gi|255764511|r   49 GYSRSFC-KMGSNVIALDRDPFAVSCGQETMRDY-KEQFSLF   88 (341)
Q Consensus        49 GHS~~iL-~~~~~liaiDrD~~ai~~a~~~l~~~-~~r~~~~   88 (341)
                      |+.-|.+ -.+..|.-+|.+++++..+++++.+. ..++++.
T Consensus        24 G~~IA~~~a~g~~V~l~d~~~~~l~~~~~~i~~~~~~~i~~~   65 (293)
T 1zej_A           24 GRGIAIAIASKHEVVLQDVSEKALEAAREQIPEELLSKIEFT   65 (293)
T ss_dssp             HHHHHHHHHTTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEE
T ss_pred             HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             999999997799459998999999999998699999568623


No 358
>1bdb_A CIS-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase; NAD-dependent oxidoreductase, short-chain alcohol dehydrogenase, PCB degradation; HET: NAD; 2.00A {Pseudomonas SP} SCOP: c.2.1.2
Probab=21.86  E-value=37  Score=13.82  Aligned_cols=68  Identities=19%  Similarity=0.238  Sum_probs=43.6

Q ss_pred             CCCCCHH----HHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHH---HHHHH----H-CCCCEEEEEC
Q ss_conf             7688288----999997489099980998999999998521488527711327889---87653----1-2332478622
Q gi|255764511|r   44 TFGAGGY----SRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQL---QDYVP----D-KGVDGVVFDL  111 (341)
Q Consensus        44 TlG~GGH----S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i---~~~l~----~-~~vdgIl~DL  111 (341)
                      |=|.+|=    ++.+++.+.+|+..||+++.+....+   +++.++.++..+.++.   .+.+.    . ..+|.++.+-
T Consensus        11 TGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~---~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnA   87 (277)
T 1bdb_A           11 TGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELET---DHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNA   87 (277)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf             4878799999999999889999999799899999999---7599779998237999999999999999859986999888


Q ss_pred             CCH
Q ss_conf             520
Q gi|255764511|r  112 GVS  114 (341)
Q Consensus       112 GvS  114 (341)
                      |+.
T Consensus        88 G~~   90 (277)
T 1bdb_A           88 GIW   90 (277)
T ss_dssp             CCC
T ss_pred             CCC
T ss_conf             657


No 359
>2vha_A Periplasmic binding transport protein; periplasmic binding protein, ligand binding, ultrahigh resolution; HET: GLU; 1.00A {Shigella flexneri} PDB: 2ia4_A*
Probab=21.79  E-value=4.4  Score=19.82  Aligned_cols=193  Identities=11%  Similarity=0.054  Sum_probs=84.9

Q ss_pred             HHCCEEEEECCCHHHHHHHHHH---HHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCC----
Q ss_conf             7489099980998999999998---521488527711327889876531233247862252078887654073445----
Q gi|255764511|r   56 KMGSNVIALDRDPFAVSCGQET---MRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVSSMQIDCGDRGFSFQ----  128 (341)
Q Consensus        56 ~~~~~liaiDrD~~ai~~a~~~---l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvSS~Qld~~~RGFSf~----  128 (341)
                      +..|++.|||.|- +-..++..   +...+-.+.+....+......+....+|.++..++.+.-    .+..|.|.    
T Consensus        34 d~~G~~~G~~vDl-~~~ia~~l~~~l~~~~~~v~~~~~~~~~~~~~L~~G~~Di~~~~~~~t~~----R~~~~~fs~p~~  108 (287)
T 2vha_A           34 DNQQKVVGYSQDY-SNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVE----RQKQAAFSDTIF  108 (287)
T ss_dssp             CSSSCEESHHHHH-HHHHHHHHHHHTTCTTCEEEEEECCTTTHHHHHHTTSCSEECSSCBCCHH----HHTTCEEEEEEE
T ss_pred             CCCCCEEEEHHHH-HHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCEEECCCCCCHH----HHHHCCCCCCCC
T ss_conf             9999888866999-99999997477377870699998799999999986996434113446645----654324554300


Q ss_pred             ---------CCCCEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHCCCC----CHHHHH
Q ss_conf             ---------664101043556841899986222578998999744630---2688999999997521243----213799
Q gi|255764511|r  129 ---------KSGPLDMRMSCSGISASDVVNQANVKDLTRILGILGEEK---QASRIAHAIVKRRQSAPFQ----TTQDLS  192 (341)
Q Consensus       129 ---------~dgpLDMRmd~~~~tA~eiln~~s~~~L~~i~~~yGee~---~a~~IA~~Iv~~R~~~~i~----TT~eL~  192 (341)
                               ++.++...-|..+.+..-+-.+..+..|...+...+...   .....+..+ ..-..+.+.    ....+.
T Consensus       109 ~~~~~l~~~k~~~i~~~~dL~g~~v~v~~gs~~~~~l~~~~~~~~~~~~iv~~~~~~~~~-~~l~~grvD~~i~~~~~~~  187 (287)
T 2vha_A          109 VVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSF-RTLESGRAVAFMMDDALLA  187 (287)
T ss_dssp             EEEEEEEEETTSSCCSGGGGTTCEEEEETTSHHHHHHHHHHHHTTCCCEEEEESSHHHHH-HHHHTTSCSEEEEEHHHHH
T ss_pred             CCCCEEEEECCCCCCCHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHH-HHHHCCCCEEEEEEHHHHH
T ss_conf             047257775489878987808981221378669999999888737896346522178999-9998699409996149999


Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHH
Q ss_conf             999988764312771257888888766513405789999998852024453389987255023899999986
Q gi|255764511|r  193 SLIQKTVYFSKNNRIHPATRSFQALRIFVNNEIEELAQGLRSAEKALKAGGLLIVVSFHSLEDRLVKKFFAS  264 (341)
Q Consensus       193 ~iI~~~~~~~~~~k~hpatr~FQALRI~VN~El~~L~~~L~~~~~~L~~gGrl~VISFHSLEDRiVK~ff~~  264 (341)
                      ..+...... .....-+.....+.+.|.|++.=.+|...+..+..-|...|.+         ++|.+++|..
T Consensus       188 ~~~~~~~~~-~~~~~~~~~~~~~~~~~av~k~~~~L~~~in~~l~~l~~~G~~---------~~I~~kwf~~  249 (287)
T 2vha_A          188 GERAKAKKP-DNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEA---------EKWFDKWFKN  249 (287)
T ss_dssp             HHHTTSSSG-GGEEEESCCSCEEEEEEEECTTCHHHHHHHHHHHHHHHHTTHH---------HHHHHHHHHS
T ss_pred             HHHHHCCCC-CCEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCHH---------HHHHHHHCCC
T ss_conf             999965788-8679937877763189999489999999999999999978599---------9999997689


No 360
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protein structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=21.56  E-value=37  Score=13.79  Aligned_cols=68  Identities=21%  Similarity=0.269  Sum_probs=43.4

Q ss_pred             CCCCCHH----HHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHH---HHHHHHHH-----CCCCEEEEEC
Q ss_conf             7688288----9999974890999809989999999985214885277113278---89876531-----2332478622
Q gi|255764511|r   44 TFGAGGY----SRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFS---QLQDYVPD-----KGVDGVVFDL  111 (341)
Q Consensus        44 TlG~GGH----S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~---~i~~~l~~-----~~vdgIl~DL  111 (341)
                      |=|.+|=    ++.+++.+.+|+..|++++.+....   ++++.+...+..+.+   ++.+.+..     ..+|.++-.-
T Consensus        12 TG~s~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnA   88 (263)
T 2a4k_A           12 TGAASGIGRAALDLFAREGASLVAVDREERLLAEAV---AALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFA   88 (263)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGG
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             488868999999999987998999979889999999---97389579999848899999999999999829998999899


Q ss_pred             CCH
Q ss_conf             520
Q gi|255764511|r  112 GVS  114 (341)
Q Consensus       112 GvS  114 (341)
                      |++
T Consensus        89 G~~   91 (263)
T 2a4k_A           89 GVA   91 (263)
T ss_dssp             GGT
T ss_pred             CCC
T ss_conf             899


No 361
>3i1j_A Oxidoreductase, short chain dehydrogenase/reductase family; dimer, mixed alpha-beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV}
Probab=21.44  E-value=38  Score=13.77  Aligned_cols=78  Identities=23%  Similarity=0.391  Sum_probs=47.5

Q ss_pred             CCCEEEECCCCCCHHH----HHHHHHCCEEEEECCCHHHHHHHHHHHHHCC-CC--EEEEC---CCHHHHHHHHH----H
Q ss_conf             8888998376882889----9999748909998099899999999852148-85--27711---32788987653----1
Q gi|255764511|r   36 PGKVILDATFGAGGYS----RSFCKMGSNVIALDRDPFAVSCGQETMRDYK-EQ--FSLFQ---ATFSQLQDYVP----D  101 (341)
Q Consensus        36 ~~g~~iD~TlG~GGHS----~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~-~r--~~~~~---~~F~~i~~~l~----~  101 (341)
                      .|.+.| -|-|.+|==    +.+++.+.+|+..||+++.+....+.++..+ ..  +..+.   .+.+.+.+...    .
T Consensus        13 ~gKval-ITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVIL-VTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf             969899-9684759999999999987998999989889999999999962788733998614436699999999999998


Q ss_pred             -CCCCEEEEECCCH
Q ss_conf             -2332478622520
Q gi|255764511|r  102 -KGVDGVVFDLGVS  114 (341)
Q Consensus       102 -~~vdgIl~DLGvS  114 (341)
                       .++|.++-+-|+.
T Consensus        92 ~g~iDilvnnAg~~  105 (247)
T 3i1j_A           92 FGRLDGLLHNASII  105 (247)
T ss_dssp             HSCCSEEEECCCCC
T ss_pred             HCCCCEEEECCCCC
T ss_conf             39987899788657


No 362
>3db2_A Putative NADPH-dependent oxidoreductase; ZP_01370612.1, structural genomics, joint center for structural genomics, JCSG; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=20.85  E-value=39  Score=13.69  Aligned_cols=81  Identities=10%  Similarity=0.166  Sum_probs=42.2

Q ss_pred             CCCCCHHHHHHHH---H--CCEEEE-ECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHH
Q ss_conf             7688288999997---4--890999-809989999999985214885277113278898765312332478622520788
Q gi|255764511|r   44 TFGAGGYSRSFCK---M--GSNVIA-LDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFDLGVSSMQ  117 (341)
Q Consensus        44 TlG~GGHS~~iL~---~--~~~lia-iDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~DLGvSS~Q  117 (341)
                      -.|.|.-.+..+.   +  +-+|+| .|+|++....+.+.   |+  +.    .|+++++++....+|+|+.=. ....|
T Consensus        10 iIG~G~~~~~h~~~~~~~~~~~v~~v~d~~~~~~~~~~~~---~~--~~----~~~~~~~ll~~~~iD~V~i~t-p~~~h   79 (354)
T 3db2_A           10 AIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKR---YN--CA----GDATMEALLAREDVEMVIITV-PNDKH   79 (354)
T ss_dssp             EECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHH---HT--CC----CCSSHHHHHHCSSCCEEEECS-CTTSH
T ss_pred             EECCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH---HC--CC----CCCCHHHHHCCCCCCEEEECC-CHHHH
T ss_conf             9938399999999998589948999988999999999998---19--98----338999995699998899879-77888


Q ss_pred             HHHH----HHCCCCCCCCCEE
Q ss_conf             8765----4073445664101
Q gi|255764511|r  118 IDCG----DRGFSFQKSGPLD  134 (341)
Q Consensus       118 ld~~----~RGFSf~~dgpLD  134 (341)
                      .+-.    +.|--.--+-|+-
T Consensus        80 ~~~~~~al~~gk~V~~EKP~a  100 (354)
T 3db2_A           80 AEVIEQCARSGKHIYVEKPIS  100 (354)
T ss_dssp             HHHHHHHHHTTCEEEEESSSC
T ss_pred             HHHHHHHHHCCCEEEEECCCC
T ss_conf             888999997899799966864


No 363
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=20.84  E-value=5.1  Score=19.36  Aligned_cols=125  Identities=20%  Similarity=0.226  Sum_probs=74.7

Q ss_pred             HHHHHHHHHCCCCCCCCCEECCCCC-CCCCHHHHHHHCCHHHHHHHHHHHCCCC-HH-HHHHHHHHHHHHHCCCC-----
Q ss_conf             7888765407344566410104355-6841899986222578998999744630-26-88999999997521243-----
Q gi|255764511|r  115 SMQIDCGDRGFSFQKSGPLDMRMSC-SGISASDVVNQANVKDLTRILGILGEEK-QA-SRIAHAIVKRRQSAPFQ-----  186 (341)
Q Consensus       115 S~Qld~~~RGFSf~~dgpLDMRmd~-~~~tA~eiln~~s~~~L~~i~~~yGee~-~a-~~IA~~Iv~~R~~~~i~-----  186 (341)
                      ..|+.....|||+--    -+-=|+ .+.+..|+|.-+.++.=.+.+--|||.- +. +.+|.++...+.+||+.     
T Consensus       185 ~~~~~~~g~G~S~~V----siGnd~~~g~~~~D~L~~~~~Dp~Tk~Ivly~E~~g~~e~~~a~~~k~~~~~KPVVa~kaG  260 (334)
T 3mwd_B          185 NNIISRTTDGVYEGV----AIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGIKEGRLTKPIVCWCIG  260 (334)
T ss_dssp             HHHHHHHSSCEEEEE----ECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHHHHHHHHHHTTSCCSCEEEEEEC
T ss_pred             HHHHHHCCCCEEEEE----ECCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEE
T ss_conf             999998299875898----0588875687499999986449998499998454783799999999855899988999973


Q ss_pred             CHH-HHHHHHH----HHHHHHHCCCCHHH---HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             213-7999999----88764312771257---888888766513405789999998852024453389
Q gi|255764511|r  187 TTQ-DLSSLIQ----KTVYFSKNNRIHPA---TRSFQALRIFVNNEIEELAQGLRSAEKALKAGGLLI  246 (341)
Q Consensus       187 TT~-eL~~iI~----~~~~~~~~~k~hpa---tr~FQALRI~VN~El~~L~~~L~~~~~~L~~gGrl~  246 (341)
                      +|. ....-..    .+.-..  .. -.|   ...|++--+.|=+-+++|-..|.+.++-|.+.|.+.
T Consensus       261 rsa~~~~~~~~mgHtGAia~~--~~-gsa~~k~~al~~aGv~vv~~~~el~~~l~~~~~~l~~~G~i~  325 (334)
T 3mwd_B          261 TCATMFSSEVQFGHAGACANQ--AS-ETAVAKNQALKEAGVFVPRSFDELGEIIQSVYEDLVANGVIV  325 (334)
T ss_dssp             TTCC----------------C--GG-GSHHHHHHHHHHTTCBCCSSGGGHHHHHHHHHHHHHHTTSCC
T ss_pred             CCCCCCCCCCCCCCHHHCCCC--CC-CCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             267778855555353120368--98-899999999998799687999999999999999886578656


No 364
>1vjk_A Molybdopterin converting factor, subunit 1; structural genomics, PFU-562899-001, PSI, protein structure initiative; 1.51A {Pyrococcus furiosus} SCOP: d.15.3.1
Probab=20.84  E-value=16  Score=16.22  Aligned_cols=58  Identities=21%  Similarity=0.141  Sum_probs=35.6

Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             32137999999887643127712578888887665134057899999988520244533899872
Q gi|255764511|r  186 QTTQDLSSLIQKTVYFSKNNRIHPATRSFQALRIFVNNEIEELAQGLRSAEKALKAGGLLIVVSF  250 (341)
Q Consensus       186 ~TT~eL~~iI~~~~~~~~~~k~hpatr~FQALRI~VN~El~~L~~~L~~~~~~L~~gGrl~VISF  250 (341)
                      .|..+|.+.+..-.+.....-...+...-+.++++||++.-..       -..|+.|-.++++.-
T Consensus        37 ~Tv~~Ll~~L~~~~p~~~~~l~~~~~~~~~~v~v~vN~~~~~~-------d~~L~dgDeVai~PP   94 (98)
T 1vjk_A           37 ARVRDLIEEIKKRHEKFKEEVFGEGYDEDADVNIAVNGRYVSW-------DEELKDGDVVGVFPP   94 (98)
T ss_dssp             CBHHHHHHHHHHHCGGGGGSCBCSSSCTTSSBEEEETTBCCCT-------TCBCCTTCEEEEESC
T ss_pred             CCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCEECCC-------CCCCCCCCEEEEECC
T ss_conf             9799999999986715788864110145664799988899699-------978099899999798


No 365
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=20.56  E-value=39  Score=13.65  Aligned_cols=114  Identities=8%  Similarity=0.031  Sum_probs=53.2

Q ss_pred             CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH--CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC--HH
Q ss_conf             22578998999744630268899999999752--124321379999998876431277125788888876651340--57
Q gi|255764511|r  151 ANVKDLTRILGILGEEKQASRIAHAIVKRRQS--APFQTTQDLSSLIQKTVYFSKNNRIHPATRSFQALRIFVNNE--IE  226 (341)
Q Consensus       151 ~s~~~L~~i~~~yGee~~a~~IA~~Iv~~R~~--~~i~TT~eL~~iI~~~~~~~~~~k~hpatr~FQALRI~VN~E--l~  226 (341)
                      .+.+++..++..++....+..++..|...-..  ....+-.++...+....+.   ....-+-.+|+.+-..-+..  .+
T Consensus        51 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~n~dG~I~f~EFl~~l~~~~~~---~~~~kl~~~F~~~D~d~~G~I~~~  127 (207)
T 2d8n_A           51 ITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAG---KTNQKLEWAFSLYDVDGNGTISKN  127 (207)
T ss_dssp             EEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCS---SSSTTHHHHHHHHCTTCSSEECHH
T ss_pred             CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCC---CHHHHHHHHHHCCCCCCCCCCCHH
T ss_conf             97999999999857888858999999998557999767279999998863146---447789988750147998959799


Q ss_pred             HHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHCC
Q ss_conf             89999998852024453389987255023899999986417
Q gi|255764511|r  227 ELAQGLRSAEKALKAGGLLIVVSFHSLEDRLVKKFFASRSG  267 (341)
Q Consensus       227 ~L~~~L~~~~~~L~~gGrl~VISFHSLEDRiVK~ff~~~~~  267 (341)
                      ++..++......+.+.+.-.+..-....+..|...|+....
T Consensus       128 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~  168 (207)
T 2d8n_A          128 EVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGK  168 (207)
T ss_dssp             HHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             99999999976446465302550020089999999999679


No 366
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3lb0_A* 3l2i_A* 3nnt_A* 3m7w_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=20.46  E-value=35  Score=13.96  Aligned_cols=29  Identities=10%  Similarity=0.078  Sum_probs=10.4

Q ss_pred             ECCCHHHHHHHHHHHHHC-CCCEEEECCCH
Q ss_conf             809989999999985214-88527711327
Q gi|255764511|r   64 LDRDPFAVSCGQETMRDY-KEQFSLFQATF   92 (341)
Q Consensus        64 iDrD~~ai~~a~~~l~~~-~~r~~~~~~~F   92 (341)
                      .+++.+.+....++.... .+-+.+.-+-|
T Consensus        47 ~~~t~~e~l~~a~~~~~~~aDlvE~RlD~l   76 (276)
T 3o1n_A           47 MGKTITDVKSEALAYREADFDILEWRVDHF   76 (276)
T ss_dssp             CCSSHHHHHHHHHHHTTSCCSEEEEEGGGC
T ss_pred             CCCCHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             889999999999986017999899976235


No 367
>2cq2_A Hypothetical protein LOC91801; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.24  E-value=40  Score=13.61  Aligned_cols=24  Identities=17%  Similarity=0.108  Sum_probs=18.5

Q ss_pred             HHHHHCCHHHHHHHHHHHCCCCHH
Q ss_conf             998622257899899974463026
Q gi|255764511|r  146 DVVNQANVKDLTRILGILGEEKQA  169 (341)
Q Consensus       146 eiln~~s~~~L~~i~~~yGee~~a  169 (341)
                      .+-+..++++|.++|..||+...-
T Consensus        34 gL~~~~te~~L~~~F~~~G~i~~v   57 (114)
T 2cq2_A           34 GLGNGVSRNQLLPVLEKCGLVDAL   57 (114)
T ss_dssp             TGGGTCCHHHHHHHHHHHSCEEEE
T ss_pred             CCCCCCCHHHHHHHHHHCCCEEEE
T ss_conf             989998899999999852992799


No 368
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=20.22  E-value=40  Score=13.61  Aligned_cols=74  Identities=24%  Similarity=0.370  Sum_probs=45.2

Q ss_pred             CCCEEEECCCCCCHH----HHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHHH-----CC
Q ss_conf             888899837688288----99999748909998099899999999852148852771132788---9876531-----23
Q gi|255764511|r   36 PGKVILDATFGAGGY----SRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQ---LQDYVPD-----KG  103 (341)
Q Consensus        36 ~~g~~iD~TlG~GGH----S~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~---i~~~l~~-----~~  103 (341)
                      .|.+.| -|=|.+|=    ++.+++.+.+|+..|++++.++...+.+    .+..++..+.++   +......     .+
T Consensus         8 ~GKval-ITGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~----~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   82 (270)
T 1yde_A            8 AGKVVV-VTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRFGR   82 (270)
T ss_dssp             TTCEEE-EETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHC----CCCEEEECCCCCHHHHHHHHHHHHHHCCC
T ss_conf             998899-9488888999999999987999999979989999999866----99779982079999999999999997499


Q ss_pred             CCEEEEECCCH
Q ss_conf             32478622520
Q gi|255764511|r  104 VDGVVFDLGVS  114 (341)
Q Consensus       104 vdgIl~DLGvS  114 (341)
                      +|.++-.-|+.
T Consensus        83 iDiLVnnAG~~   93 (270)
T 1yde_A           83 LDCVVNNAGHH   93 (270)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
T ss_conf             98899899899


Done!