HHsearch alignment for GI: 255764513 and conserved domain: COG0008
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=972.89 Aligned_cols=451 Identities=41% Similarity=0.659 Sum_probs=422.8
Q ss_pred EEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
Q ss_conf 05634843388785015999999999999718849999704866638867999999998865898886765588767632
Q gi|255764513|r 7 VRVRIAPSPTGEPHIGTAYTALFNYLIAKRTGGKFILRIEDTDSKRSTLESENAVMQSLKWCGLNWDEGPDIGGAYGPYR 86 (492)
Q Consensus 7 v~~RfaPsPtG~lH~G~~rtal~n~l~a~~~~g~f~lRieDtd~~R~~~~~~~~i~~~l~wlgl~~De~~~~~g~~~p~~ 86 (492)
T Consensus 10 v~tRFAPsPtG~LHiG~artAl~n~~~Ar~~~G~fiLRiEDTD~~R~~~e~~~~I~~~L~WLGl~wde~--------~~~ 81 (472)
T COG0008 10 VRTRFAPSPTGYLHIGHARTALLNYLYARKYGGKFILRIEDTDPERETPEAEDAILEDLEWLGLDWDEG--------PYY 81 (472)
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCC--------EEE
T ss_conf 489779599985426889999997999998399799996479988788789999999998668888976--------143
Q ss_pred CCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCC-CCCCCCCCCCHHHHHHHHHCCCCCEEEEEEC--C
Q ss_conf 326289999999999988982451488999776688766431000-2366555788333001120257740788622--4
Q gi|255764513|r 87 QSERKNIYQPYVQNLLEKKLAFRCFCSTERLEEMRRAQRKRNIPS-RYDGHCLKLSSQEIERLSQEQKKHVVRLTVP--N 163 (492)
Q Consensus 87 QS~r~~~y~~~~~~L~~~g~aY~c~~t~eel~~~r~~~~~~~~~~-~Y~~~~r~l~~~e~~~~~~~g~~~~iR~k~p--~ 163 (492)
T Consensus 82 QS~r~~~Y~~~~~~Li~~G~AY~c~ct~eele~~R~~~~~~~~~P~~y~r~~~~L~~~~~~~~~~~~~~~~iR~k~~~~~ 161 (472)
T COG0008 82 QSERFDIYYEYAEKLIEKGKAYVCYCTPEELEEMRELRGALGEPPPSYDRDERNLTLFEKMADLGEGGPAVVRLKIPMAH 161 (472)
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHCCCCCCEEEEEECCCCC
T ss_conf 64239999999999998799688668989999999988625889999992354354667776304688807999477777
Q ss_pred CCEEECCCCCCCCEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHH
Q ss_conf 31143047513402136432356410004532489867887644444443112235430247889999985100000101
Q gi|255764513|r 164 QGSCVFQDKVYGEMEIPWNAVDMQVLLKSDGMPTYHLANVIDDHLMKITHVARGEEWISSVPKHILLYQYFNFPIPEFIH 243 (492)
Q Consensus 164 ~~~~~~~D~i~G~~~~~~~~~~D~vi~r~dg~ptY~~a~vvDD~~m~ithviRg~d~~~~t~~q~~l~~al~~~~p~f~H 243 (492)
T Consensus 162 ~~~-~~~D~v~g~i~~~~~~~~d-v~~r~dg~ptY~favvvDD~~mgITHviRG~d~~~nt~~q~~l~~~lg~~~P~~~H 239 (472)
T COG0008 162 PGP-VFRDLVRGRIVFAPKHPDF-VILRYDGYPTYNFAVVVDDHLMGITHVLRGEDHLDNTPRQIWLYEALGWPPPVYAH 239 (472)
T ss_pred CCC-CCCCCEEEEEECCCCCCCC-EEECCCCCCCCCEEEEECHHHCCCCEEEECHHHCCCCHHHHHHHHHCCCCCCCEEE
T ss_conf 898-4120423367447668756-04247777454300261032168863773444204789999999973999982797
Q ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf 45553110132212234330245666297737799899850676665530110146777652021137554420156556
Q gi|255764513|r 244 LPLIKNPDKSKLSKRRNPTSISYYSAMGYLPEALINFLALLFVHKSEDDDELMDMQQLIHHFDLHHLSKAGAVFDKQKLD 323 (492)
Q Consensus 244 ~pli~~~~g~klSKR~~~~~i~~~~~~GylPeAilNyLalLGws~~~~d~Eifsl~eli~~FdL~~I~Ks~A~FD~eKL~ 323 (492)
T Consensus 240 ~~li~~~~g~kLSKr~~~~~~~~~~~~G~~~~al~~~~allg~~~~~~~~e~f~~e~~i~~fd~~~~~ks~a~fd~~kL~ 319 (472)
T COG0008 240 LPLLLNEDGKKLSKRKGAVSIGEYRVEGWLPPALPNLLALLGRGYPPEAIEIFSLEEGIKWFDLTIVSKSPAAFDRKKLD 319 (472)
T ss_pred EEEEECCCCCEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 51046688783047667665302555188938899999984688982069998999987551121021161013687767
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHCC--------CCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
Q ss_conf 64355551269989999864442000--------0123220688872532035667755675224678885455433148
Q gi|255764513|r 324 WLNGRWIREKLSTTEFLSRVSQWMKE--------KDRLTQALTLAQSRITTLSALPQMTDFLFKSDLHLTAESFKSTALC 395 (492)
Q Consensus 324 wlN~qyIr~~l~~~el~~~l~~~l~~--------~~~l~~il~likeRi~tL~Di~~~~~ffF~~~~~~d~e~~~k~~~~ 395 (492)
T Consensus 320 ~~n~ry~~~-~p~e~~~~~~~~~~~~~~~~~~~~~e~~~~~~~l~~~---~~~~i~~~~~~~~~~~-----~~~~~~~l~ 390 (472)
T COG0008 320 WLNPRYMRV-DPVEVVIENLKPHLEEEGATLPLNPEMGERVVPLTKE---TLIEIERLDFFFFEDK-----EEVRLKRLA 390 (472)
T ss_pred HHHHHHHHH-CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC---HHHHHHHHHHHHHCCH-----HHHHHHHHC
T ss_conf 660788873-8999998751454543115677777887666454164---3787767789873663-----788988602
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCEEEEEEECCCCCCCHHHHHHHHCHHHHHHHHHHH
Q ss_conf 66799999999998405888998889999999999957982331012678896488888899999884959999999999
Q gi|255764513|r 396 PEEIIDILKTTQEEFEVIQIWKRENIETALRNVAQHREKSLKIIVKPLFLAITGSKYSLPLFDSIEILGRSVVYFRLRHA 475 (492)
Q Consensus 396 ~e~~~~iL~~~~~~L~~~~~w~~e~Ie~~ik~i~e~~giK~k~l~~PLRiALTG~~~GP~L~eil~lLGkeetl~RL~~a 475 (492)
T Consensus 391 ~~~~~~~l~~~~~~l~~~-~~~~~~i~~wv~~~~~~~~vk~~~~~~plr~a~tG~~~~p~l~~~~~~~g~~~q~~Rl~~~ 469 (472)
T COG0008 391 NVIVAEVLEKDAEGLITS-DWTKENIIHWVKAVARLFGVKGPKLFPPLRVALTGGYVEPELADTIELLGKEVQFERLGYA 469 (472)
T ss_pred CHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 067899999898751312-6468999999999999857877555501688860885687778877750139999989888
Q ss_pred HH
Q ss_conf 99
Q gi|255764513|r 476 IA 477 (492)
Q Consensus 476 L~ 477 (492)
T Consensus 470 ~~ 471 (472)
T COG0008 470 LA 471 (472)
T ss_pred HH
T ss_conf 50