HHsearch alignment for GI: 255764513 and conserved domain: COG0180
>COG0180 TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=98.28 E-value=2.6e-05 Score=56.37 Aligned_cols=199 Identities=21% Similarity=0.273 Sum_probs=120.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC----CCCCCC----CHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 843388785015999999999999718849999704----866638----867999999998865898886765588767
Q gi|255764513|r 12 APSPTGEPHIGTAYTALFNYLIAKRTGGKFILRIED----TDSKRS----TLESENAVMQSLKWCGLNWDEGPDIGGAYG 83 (492)
Q Consensus 12 aPsPtG~lH~G~~rtal~n~l~a~~~~g~f~lRieD----td~~R~----~~~~~~~i~~~l~wlgl~~De~~~~~g~~~ 83 (492)
T Consensus 11 G~~PSG~lHLGny~ga~~~~v~~q~~~~~~f~~IaDlha~t~~~~~~~~~l~~~~~e~~a~~LA~GiDP~k~-------~ 83 (314)
T COG0180 11 GIQPSGKLHLGNYLGAIRNWVLLQEEYYECFFFIADLHAITVRQDPTEEDLRQATREVAADYLAVGLDPEKS-------T 83 (314)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC-------E
T ss_conf 678899752157699999999985355754999962777554888769999999999999998704685602-------7
Q ss_pred CEECCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 63232628999999999998898245148899977668876643100023665557883330011202577407886224
Q gi|255764513|r 84 PYRQSERKNIYQPYVQNLLEKKLAFRCFCSTERLEEMRRAQRKRNIPSRYDGHCLKLSSQEIERLSQEQKKHVVRLTVPN 163 (492)
Q Consensus 84 p~~QS~r~~~y~~~~~~L~~~g~aY~c~~t~eel~~~r~~~~~~~~~~~Y~~~~r~l~~~e~~~~~~~g~~~~iR~k~p~ 163 (492)
T Consensus 84 if~QS~v~e~~e-La~-------~l~~~~~~gel~r~----------~~fKdk~~-----------~~~~---------- 124 (314)
T COG0180 84 IFLQSEVPEHAE-LAW-------LLSCVTNFGELERM----------TQFKDKSA-----------KKGE---------- 124 (314)
T ss_pred EEECCCCHHHHH-HHH-------HHHCCCCHHHHHHH----------CCCCHHHH-----------CCCC----------
T ss_conf 998068667999-999-------99861759999852----------37643332-----------3435----------
Q ss_pred CCEEECCCCCCCCEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH------HC
Q ss_conf 311430475134021364323564100045324898678876444444431122354302478899999851------00
Q gi|255764513|r 164 QGSCVFQDKVYGEMEIPWNAVDMQVLLKSDGMPTYHLANVIDDHLMKITHVARGEEWISSVPKHILLYQYFN------FP 237 (492)
Q Consensus 164 ~~~~~~~D~i~G~~~~~~~~~~D~vi~r~dg~ptY~~a~vvDD~~m~ithviRg~d~~~~t~~q~~l~~al~------~~ 237 (492)
T Consensus 125 --------------~~~~Gl~~YPvlqAADI------------Ll~~a~~VPVG~DQ~qHleLtRDiA~rfn~~y~~~f~ 178 (314)
T COG0180 125 --------------SIPIGLLTYPVLQAADI------------LLYQATLVPVGEDQDQHLELTRDIARRFNHLYGEVFP 178 (314)
T ss_pred --------------CCCCCCHHCCHHHHHHH------------HHCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf --------------66410210549988876------------5026875104888539999999999998744667537
Q ss_pred CCHHHHHH--HHHHHHC-CCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCC
Q ss_conf 00010145--5531101-3221223433024566629773779989985067
Q gi|255764513|r 238 IPEFIHLP--LIKNPDK-SKLSKRRNPTSISYYSAMGYLPEALINFLALLFV 286 (492)
Q Consensus 238 ~p~f~H~p--li~~~~g-~klSKR~~~~~i~~~~~~GylPeAilNyLalLGw 286 (492)
T Consensus 179 ~P~~~~~~~~~i~gL~g~~KMSkS~~ns~I-~L~D---~~~~i~kKI~~~~t 226 (314)
T COG0180 179 LPEALISKVARLPGLDGPGKMSKSDPNSAI-FLLD---DPKTIRKKIKKAAT 226 (314)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEE-ECCC---CHHHHHHHHHHHCC
T ss_conf 860014477746478999866666999824-5049---98999999998526