HHsearch alignment for GI: 255764513 and conserved domain: COG0215

>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=98.67  E-value=1.4e-07  Score=71.71  Aligned_cols=230  Identities=20%  Similarity=0.176  Sum_probs=133.4

Q ss_pred             CCCCCCCCCHHHHHHHHHHHH---HHHHCCC--EEEEEECCCCC---CC----------CCHHHHHHHHHHHHHCCCC-C
Q ss_conf             843388785015999999999---9997188--49999704866---63----------8867999999998865898-8
Q gi|255764513|r   12 APSPTGEPHIGTAYTALFNYL---IAKRTGG--KFILRIEDTDS---KR----------STLESENAVMQSLKWCGLN-W   72 (492)
Q Consensus        12 aPsPtG~lH~G~~rtal~n~l---~a~~~~g--~f~lRieDtd~---~R----------~~~~~~~~i~~~l~wlgl~-~   72 (492)
T Consensus        29 GpTVYd~~HIGhaRt~V~fDvl~R~L~~~Gy~V~yV~NiTDIDDKIi~rA~~~g~~~~ev~~~~i~~f~~D~~aL~v~~p  108 (464)
T COG0215          29 GPTVYDYAHIGHARTYVVFDVLRRYLRYLGYKVTYVRNITDIDDKIINRAREEGLSIREVAERYIAAFFEDMDALNVLPP  108 (464)
T ss_pred             CCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             88257764456676520299999999982970799964666638999999982999999999999999999998299998


Q ss_pred             CCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf             86765588767632326289999999999988982451488999776688766431000236655578833300112025
Q gi|255764513|r   73 DEGPDIGGAYGPYRQSERKNIYQPYVQNLLEKKLAFRCFCSTERLEEMRRAQRKRNIPSRYDGHCLKLSSQEIERLSQEQ  152 (492)
Q Consensus        73 De~~~~~g~~~p~~QS~r~~~y~~~~~~L~~~g~aY~c~~t~eel~~~r~~~~~~~~~~~Y~~~~r~l~~~e~~~~~~~g  152 (492)
T Consensus       109 ~~~P---------raTe~I~~iI~~I~~Li~kG~AY~~~~G~--------VYFdv~~f~~YG~LS~~~~le~----l~~g  167 (464)
T COG0215         109 DIEP---------RATEHIDEIIEFIEKLIEKGYAYVADDGD--------VYFDVSKFKDYGKLSGRDSLEE----LQAG  167 (464)
T ss_pred             CCCC---------CHHHCHHHHHHHHHHHHHCCCEEEECCCC--------EEEECCCHHHHHHHCCCCCHHH----HHHC
T ss_conf             6557---------47647999999999999779658846982--------8995243031786528987667----7513


Q ss_pred             CCCEEEEEECCCCEEECCCCCCCCEECCCCCCCCCCEECC-------------CCCHHHHHHHHH-HHHHHHHHHHHC--
Q ss_conf             7740788622431143047513402136432356410004-------------532489867887-644444443112--
Q gi|255764513|r  153 KKHVVRLTVPNQGSCVFQDKVYGEMEIPWNAVDMQVLLKS-------------DGMPTYHLANVI-DDHLMKITHVAR--  216 (492)
Q Consensus       153 ~~~~iR~k~p~~~~~~~~D~i~G~~~~~~~~~~D~vi~r~-------------dg~ptY~~a~vv-DD~~m~ithviR--  216 (492)
T Consensus       168 a----r~~~----------------~~~Krnp~DFvLWK~sk~gEp~W~SPWG~GRPGWHIECSaM~~~~LG~~~DIHgG  227 (464)
T COG0215         168 A----RVEV----------------DEEKRNPLDFVLWKAAKPGEPSWDSPWGKGRPGWHIECSAMSTKYLGETFDIHGG  227 (464)
T ss_pred             C----CCCC----------------CCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECC
T ss_conf             5----4566----------------5455880011244258999988779988999944688999999870897512468


Q ss_pred             CCC----CCCHHHHHHHHHHHHHH-C--CCHHHHHHHHHHHHCCCCCCCCCC-CCHHHHHHCCCCHHHHHHHHHHCCCC
Q ss_conf             235----43024788999998510-0--000101455531101322122343-30245666297737799899850676
Q gi|255764513|r  217 GEE----WISSVPKHILLYQYFNF-P--IPEFIHLPLIKNPDKSKLSKRRNP-TSISYYSAMGYLPEALINFLALLFVH  287 (492)
Q Consensus       217 g~d----~~~~t~~q~~l~~al~~-~--~p~f~H~pli~~~~g~klSKR~~~-~~i~~~~~~GylPeAilNyLalLGws  287 (492)
T Consensus       228 G~DLiFPHHENEiAQs---ea~~g~~~~a~yWmH~G~l-~i~geKMSKSLGNfiti~d~l~~-~~p~~lR~~lls~HYR  301 (464)
T COG0215         228 GSDLIFPHHENEIAQS---EAATGVKPFAKYWMHNGFL-NIDGEKMSKSLGNFITVRDLLKK-YDPEVLRLFLLSSHYR  301 (464)
T ss_pred             CCCCCCCCCCCHHHHH---HHHHCCCCCEEEEEECCEE-EECCCCCCCCCCCEEEHHHHHHH-CCHHHHHHHHHHHHHC
T ss_conf             5025588863089998---7642997600586882645-24672765235776679999865-4879999999987757