HHsearch alignment for GI: 255764513 and conserved domain: PRK05347

>PRK05347 glutaminyl-tRNA synthetase; Provisional.
Probab=100.00  E-value=0  Score=417.84  Aligned_cols=289  Identities=26%  Similarity=0.366  Sum_probs=228.6

Q ss_pred             CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             87705634843388785015999999999999718849999704866638867999999998865898886765588767
Q gi|255764513|r    4 SSKVRVRIAPSPTGEPHIGTAYTALFNYLIAKRTGGKFILRIEDTDSKRSTLESENAVMQSLKWCGLNWDEGPDIGGAYG   83 (492)
Q Consensus         4 ~~~v~~RfaPsPtG~lH~G~~rtal~n~l~a~~~~g~f~lRieDtd~~R~~~~~~~~i~~~l~wlgl~~De~~~~~g~~~   83 (492)
T Consensus        27 ~gkVvtRFpPePnG~LHiGHaka~~lN~~~a~~y~G~~~LRfDDTNP~~e~~e~~~~I~~d~~wLg~~~~~--------~   98 (556)
T PRK05347         27 HTKVHTRFPPEPNGYLHIGHAKSICLNFGLAQDYGGKCNLRFDDTNPEKEDQEYVDSIKEDVRWLGFDWGG--------E   98 (556)
T ss_pred             CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC--------E
T ss_conf             68399804989998761888899986699999709989998358998745489999999999874998898--------2


Q ss_pred             CEECCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH---HHCCC----CCE
Q ss_conf             63232628999999999998898245148899977668876643100023665557883330011---20257----740
Q gi|255764513|r   84 PYRQSERKNIYQPYVQNLLEKKLAFRCFCSTERLEEMRRAQRKRNIPSRYDGHCLKLSSQEIERL---SQEQK----KHV  156 (492)
Q Consensus        84 p~~QS~r~~~y~~~~~~L~~~g~aY~c~~t~eel~~~r~~~~~~~~~~~Y~~~~r~l~~~e~~~~---~~~g~----~~~  156 (492)
T Consensus        99 i~~~Sd~f~~~y~~a~~LI~~g~AYv~~~~~ee~~~~Rg~~~~~g~----~sp~R~~~~eenl~lf~~M~~G~~~eg~~v  174 (556)
T PRK05347         99 LRYASDYFDQLYEYAVELIKKGKAYVDDLSAEEIREYRGTLTEPGK----NSPYRDRSVEENLDLFERMRAGEFPEGSAV  174 (556)
T ss_pred             EEEEHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHCCCCCCCC----CCCCCCCCHHHHHHHHHHHHCCCCCCCEEE
T ss_conf             7881342999999999998648813568999999987477766888----796556998999999999866887786289


Q ss_pred             EEEEECCCCEEECCCCCCCCEECCCCCCCCCCEEC---------CCC---CHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
Q ss_conf             78862243114304751340213643235641000---------453---248986788764444444311223543024
Q gi|255764513|r  157 VRLTVPNQGSCVFQDKVYGEMEIPWNAVDMQVLLK---------SDG---MPTYHLANVIDDHLMKITHVARGEEWISSV  224 (492)
Q Consensus       157 iR~k~p~~~~~~~~D~i~G~~~~~~~~~~D~vi~r---------~dg---~ptY~~a~vvDD~~m~ithviRg~d~~~~t  224 (492)
T Consensus       175 lR~K~Dm--------------~~~N~~mRDpv~yRi~~~~H~rtg~k~~iyP~YDFa~~i~D~~egiTHsl~t~Ef~~~r  240 (556)
T PRK05347        175 LRAKIDM--------------ASPNINMRDPVLYRIRHAHHHRTGDKWCIYPMYDFAHCISDAIEGITHSLCTLEFEDHR  240 (556)
T ss_pred             EEEEEEC--------------CCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCH
T ss_conf             9998514--------------89995412452578424688886882266124212423145653874242047410054


Q ss_pred             HHHHHHHHHHHH-CCCHHHHHHHHHHHHCCCCCCCCC--------------C--CCHHHHHHCCCCHHHHHHHHHHCCCC
Q ss_conf             788999998510-000010145553110132212234--------------3--30245666297737799899850676
Q gi|255764513|r  225 PKHILLYQYFNF-PIPEFIHLPLIKNPDKSKLSKRRN--------------P--TSISYYSAMGYLPEALINFLALLFVH  287 (492)
Q Consensus       225 ~~q~~l~~al~~-~~p~f~H~pli~~~~g~klSKR~~--------------~--~~i~~~~~~GylPeAilNyLalLGws  287 (492)
T Consensus       241 ~~Y~w~~~~l~~~~~P~~~ef~R-ln~~~tvlSKrkl~~lV~~g~v~GWDDPRlpTl~glrRRG~~peAi~~F~~~~Gvs  319 (556)
T PRK05347        241 PLYDWVLDNLPIPPHPRQYEFSR-LNLTYTVMSKRKLKQLVEEKHVDGWDDPRMPTISGLRRRGYTPESIREFCERIGVT  319 (556)
T ss_pred             HHHHHHHHHCCCCCCCEEEEEEE-EEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
T ss_conf             65766034027888834888634-66520222088999999759767877875056688875699989999999984854


Q ss_pred             CCCCCHHHCCHHHHHHHHHHHHCC----CCCCCCHHHHHH
Q ss_conf             665530110146777652021137----554420156556
Q gi|255764513|r  288 KSEDDDELMDMQQLIHHFDLHHLS----KAGAVFDKQKLD  323 (492)
Q Consensus       288 ~~~~d~Eifsl~eli~~FdL~~I~----Ks~A~FD~eKL~  323 (492)
T Consensus       320 k~~~---~i~~~~-l~~~~R~~ld~~a~R~~~V~~Pvkv~  355 (556)
T PRK05347        320 KQDS---VIDMSM-LESCIREDLNENAPRAMAVLDPLKVV  355 (556)
T ss_pred             CCCE---EECHHH-HHHHHHHHHHHCCCCCEEECCCEEEE
T ss_conf             4440---532999-99999998760586204751666999