HHsearch alignment for GI: 255764513 and conserved domain: PRK05347
>PRK05347 glutaminyl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=417.84 Aligned_cols=289 Identities=26% Similarity=0.366 Sum_probs=228.6
Q ss_pred CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 87705634843388785015999999999999718849999704866638867999999998865898886765588767
Q gi|255764513|r 4 SSKVRVRIAPSPTGEPHIGTAYTALFNYLIAKRTGGKFILRIEDTDSKRSTLESENAVMQSLKWCGLNWDEGPDIGGAYG 83 (492)
Q Consensus 4 ~~~v~~RfaPsPtG~lH~G~~rtal~n~l~a~~~~g~f~lRieDtd~~R~~~~~~~~i~~~l~wlgl~~De~~~~~g~~~ 83 (492)
T Consensus 27 ~gkVvtRFpPePnG~LHiGHaka~~lN~~~a~~y~G~~~LRfDDTNP~~e~~e~~~~I~~d~~wLg~~~~~--------~ 98 (556)
T PRK05347 27 HTKVHTRFPPEPNGYLHIGHAKSICLNFGLAQDYGGKCNLRFDDTNPEKEDQEYVDSIKEDVRWLGFDWGG--------E 98 (556)
T ss_pred CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC--------E
T ss_conf 68399804989998761888899986699999709989998358998745489999999999874998898--------2
Q ss_pred CEECCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH---HHCCC----CCE
Q ss_conf 63232628999999999998898245148899977668876643100023665557883330011---20257----740
Q gi|255764513|r 84 PYRQSERKNIYQPYVQNLLEKKLAFRCFCSTERLEEMRRAQRKRNIPSRYDGHCLKLSSQEIERL---SQEQK----KHV 156 (492)
Q Consensus 84 p~~QS~r~~~y~~~~~~L~~~g~aY~c~~t~eel~~~r~~~~~~~~~~~Y~~~~r~l~~~e~~~~---~~~g~----~~~ 156 (492)
T Consensus 99 i~~~Sd~f~~~y~~a~~LI~~g~AYv~~~~~ee~~~~Rg~~~~~g~----~sp~R~~~~eenl~lf~~M~~G~~~eg~~v 174 (556)
T PRK05347 99 LRYASDYFDQLYEYAVELIKKGKAYVDDLSAEEIREYRGTLTEPGK----NSPYRDRSVEENLDLFERMRAGEFPEGSAV 174 (556)
T ss_pred EEEEHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHCCCCCCCC----CCCCCCCCHHHHHHHHHHHHCCCCCCCEEE
T ss_conf 7881342999999999998648813568999999987477766888----796556998999999999866887786289
Q ss_pred EEEEECCCCEEECCCCCCCCEECCCCCCCCCCEEC---------CCC---CHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
Q ss_conf 78862243114304751340213643235641000---------453---248986788764444444311223543024
Q gi|255764513|r 157 VRLTVPNQGSCVFQDKVYGEMEIPWNAVDMQVLLK---------SDG---MPTYHLANVIDDHLMKITHVARGEEWISSV 224 (492)
Q Consensus 157 iR~k~p~~~~~~~~D~i~G~~~~~~~~~~D~vi~r---------~dg---~ptY~~a~vvDD~~m~ithviRg~d~~~~t 224 (492)
T Consensus 175 lR~K~Dm--------------~~~N~~mRDpv~yRi~~~~H~rtg~k~~iyP~YDFa~~i~D~~egiTHsl~t~Ef~~~r 240 (556)
T PRK05347 175 LRAKIDM--------------ASPNINMRDPVLYRIRHAHHHRTGDKWCIYPMYDFAHCISDAIEGITHSLCTLEFEDHR 240 (556)
T ss_pred EEEEEEC--------------CCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCH
T ss_conf 9998514--------------89995412452578424688886882266124212423145653874242047410054
Q ss_pred HHHHHHHHHHHH-CCCHHHHHHHHHHHHCCCCCCCCC--------------C--CCHHHHHHCCCCHHHHHHHHHHCCCC
Q ss_conf 788999998510-000010145553110132212234--------------3--30245666297737799899850676
Q gi|255764513|r 225 PKHILLYQYFNF-PIPEFIHLPLIKNPDKSKLSKRRN--------------P--TSISYYSAMGYLPEALINFLALLFVH 287 (492)
Q Consensus 225 ~~q~~l~~al~~-~~p~f~H~pli~~~~g~klSKR~~--------------~--~~i~~~~~~GylPeAilNyLalLGws 287 (492)
T Consensus 241 ~~Y~w~~~~l~~~~~P~~~ef~R-ln~~~tvlSKrkl~~lV~~g~v~GWDDPRlpTl~glrRRG~~peAi~~F~~~~Gvs 319 (556)
T PRK05347 241 PLYDWVLDNLPIPPHPRQYEFSR-LNLTYTVMSKRKLKQLVEEKHVDGWDDPRMPTISGLRRRGYTPESIREFCERIGVT 319 (556)
T ss_pred HHHHHHHHHCCCCCCCEEEEEEE-EEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
T ss_conf 65766034027888834888634-66520222088999999759767877875056688875699989999999984854
Q ss_pred CCCCCHHHCCHHHHHHHHHHHHCC----CCCCCCHHHHHH
Q ss_conf 665530110146777652021137----554420156556
Q gi|255764513|r 288 KSEDDDELMDMQQLIHHFDLHHLS----KAGAVFDKQKLD 323 (492)
Q Consensus 288 ~~~~d~Eifsl~eli~~FdL~~I~----Ks~A~FD~eKL~ 323 (492)
T Consensus 320 k~~~---~i~~~~-l~~~~R~~ld~~a~R~~~V~~Pvkv~ 355 (556)
T PRK05347 320 KQDS---VIDMSM-LESCIREDLNENAPRAMAVLDPLKVV 355 (556)
T ss_pred CCCE---EECHHH-HHHHHHHHHHHCCCCCEEECCCEEEE
T ss_conf 4440---532999-99999998760586204751666999