HHsearch alignment for GI: 255764513 and conserved domain: pfam00579

>pfam00579 tRNA-synt_1b tRNA synthetases class I (W and Y).
Probab=98.53  E-value=1.8e-06  Score=64.20  Aligned_cols=184  Identities=22%  Similarity=0.260  Sum_probs=100.1

Q ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC-----CCCCCCC-------HHHHHHHHHHHHHCCCCCCC
Q ss_conf             05634843388785015999999999999718849999704-----8666388-------67999999998865898886
Q gi|255764513|r    7 VRVRIAPSPTGEPHIGTAYTALFNYLIAKRTGGKFILRIED-----TDSKRST-------LESENAVMQSLKWCGLNWDE   74 (492)
Q Consensus         7 v~~RfaPsPtG~lH~G~~rtal~n~l~a~~~~g~f~lRieD-----td~~R~~-------~~~~~~i~~~l~wlgl~~De   74 (492)
T Consensus         8 vy~G~~P--Tg~lHlGhl-~~~~~~~~lq~~g~~~~~liad~~a~~~d~~~~~~~~~~~~~~~~~n~~~-~ia~g~d~~k   83 (291)
T pfam00579         8 VYTGFDP--TGPLHLGYL-VPLMKLVQFQQAGHEVFFLIGDLTAIIGDPSKSEERKLLSREEVLENAKA-QLACGLDPEK   83 (291)
T ss_pred             EEEEECC--CCHHHHHHH-HHHHHHHHHHHCCCCEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHH-HHHCCCCCCC
T ss_conf             9973488--963077989-99999999997899099997383313349896357775148999999999-9984778221


Q ss_pred             CCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             76558876763232628999999999998898245148899977668876643100023665557883330011202577
Q gi|255764513|r   75 GPDIGGAYGPYRQSERKNIYQPYVQNLLEKKLAFRCFCSTERLEEMRRAQRKRNIPSRYDGHCLKLSSQEIERLSQEQKK  154 (492)
Q Consensus        75 ~~~~~g~~~p~~QS~r~~~y~~~~~~L~~~g~aY~c~~t~eel~~~r~~~~~~~~~~~Y~~~~r~l~~~e~~~~~~~g~~  154 (492)
T Consensus        84 ~-------~i~~~s~~~~~~-~~~~~l~~~~~~~-------~v~-------------------~~~~~~~~~~r------  123 (291)
T pfam00579        84 S-------EIVNNSDWLEHL-ELAWLLRDLGNHF-------SLN-------------------RMLQFKDVKKR------  123 (291)
T ss_pred             E-------EEEECCCCCCCC-CHHHHHHHHHCCC-------HHH-------------------HHHHHHHHHHH------
T ss_conf             5-------999750156200-3999999873424-------476-------------------66404879876------


Q ss_pred             CEEEEEECCCCEEECCCCCCCCEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf             40788622431143047513402136432356410004532489867887644444443112235430247889999985
Q gi|255764513|r  155 HVVRLTVPNQGSCVFQDKVYGEMEIPWNAVDMQVLLKSDGMPTYHLANVIDDHLMKITHVARGEEWISSVPKHILLYQYF  234 (492)
Q Consensus       155 ~~iR~k~p~~~~~~~~D~i~G~~~~~~~~~~D~vi~r~dg~ptY~~a~vvDD~~m~ithviRg~d~~~~t~~q~~l~~al  234 (492)
T Consensus       124 ----~~~~~--~~~-----~~~~~YP~lQa~D~~~l-------------------~~~i~~gG~DQ~~~~~l~rdl~~k~  173 (291)
T pfam00579       124 ----LKQNP--GIS-----LGEFTYPLLQAADILLL-------------------KADLQPGGSDQWGHIELGRDLARRF  173 (291)
T ss_pred             ----HCCCC--CCC-----HHHHCCHHHHHCCCHHC-------------------CCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             ----42578--876-----65501521763230001-------------------4675665600489999999999995


Q ss_pred             H---HCCCHHHHHHHHHHHHC-CCCCCCCCCCCH
Q ss_conf             1---00000101455531101-322122343302
Q gi|255764513|r  235 N---FPIPEFIHLPLIKNPDK-SKLSKRRNPTSI  264 (492)
Q Consensus       235 ~---~~~p~f~H~pli~~~~g-~klSKR~~~~~i  264 (492)
T Consensus       174 ~~~~~~~p~~l~~~ll~~~~G~~KMSKS~~nsaI  207 (291)
T pfam00579       174 NKKVFKKPVGLTNPLLTGLDGGKKMSKSAGNSAI  207 (291)
T ss_pred             CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEE
T ss_conf             7856788348741662266787663678999726