HHsearch alignment for GI: 255764513 and conserved domain: pfam00579
>pfam00579 tRNA-synt_1b tRNA synthetases class I (W and Y).
Probab=98.53 E-value=1.8e-06 Score=64.20 Aligned_cols=184 Identities=22% Similarity=0.260 Sum_probs=100.1
Q ss_pred EEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC-----CCCCCCC-------HHHHHHHHHHHHHCCCCCCC
Q ss_conf 05634843388785015999999999999718849999704-----8666388-------67999999998865898886
Q gi|255764513|r 7 VRVRIAPSPTGEPHIGTAYTALFNYLIAKRTGGKFILRIED-----TDSKRST-------LESENAVMQSLKWCGLNWDE 74 (492)
Q Consensus 7 v~~RfaPsPtG~lH~G~~rtal~n~l~a~~~~g~f~lRieD-----td~~R~~-------~~~~~~i~~~l~wlgl~~De 74 (492)
T Consensus 8 vy~G~~P--Tg~lHlGhl-~~~~~~~~lq~~g~~~~~liad~~a~~~d~~~~~~~~~~~~~~~~~n~~~-~ia~g~d~~k 83 (291)
T pfam00579 8 VYTGFDP--TGPLHLGYL-VPLMKLVQFQQAGHEVFFLIGDLTAIIGDPSKSEERKLLSREEVLENAKA-QLACGLDPEK 83 (291)
T ss_pred EEEEECC--CCHHHHHHH-HHHHHHHHHHHCCCCEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHH-HHHCCCCCCC
T ss_conf 9973488--963077989-99999999997899099997383313349896357775148999999999-9984778221
Q ss_pred CCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 76558876763232628999999999998898245148899977668876643100023665557883330011202577
Q gi|255764513|r 75 GPDIGGAYGPYRQSERKNIYQPYVQNLLEKKLAFRCFCSTERLEEMRRAQRKRNIPSRYDGHCLKLSSQEIERLSQEQKK 154 (492)
Q Consensus 75 ~~~~~g~~~p~~QS~r~~~y~~~~~~L~~~g~aY~c~~t~eel~~~r~~~~~~~~~~~Y~~~~r~l~~~e~~~~~~~g~~ 154 (492)
T Consensus 84 ~-------~i~~~s~~~~~~-~~~~~l~~~~~~~-------~v~-------------------~~~~~~~~~~r------ 123 (291)
T pfam00579 84 S-------EIVNNSDWLEHL-ELAWLLRDLGNHF-------SLN-------------------RMLQFKDVKKR------ 123 (291)
T ss_pred E-------EEEECCCCCCCC-CHHHHHHHHHCCC-------HHH-------------------HHHHHHHHHHH------
T ss_conf 5-------999750156200-3999999873424-------476-------------------66404879876------
Q ss_pred CEEEEEECCCCEEECCCCCCCCEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 40788622431143047513402136432356410004532489867887644444443112235430247889999985
Q gi|255764513|r 155 HVVRLTVPNQGSCVFQDKVYGEMEIPWNAVDMQVLLKSDGMPTYHLANVIDDHLMKITHVARGEEWISSVPKHILLYQYF 234 (492)
Q Consensus 155 ~~iR~k~p~~~~~~~~D~i~G~~~~~~~~~~D~vi~r~dg~ptY~~a~vvDD~~m~ithviRg~d~~~~t~~q~~l~~al 234 (492)
T Consensus 124 ----~~~~~--~~~-----~~~~~YP~lQa~D~~~l-------------------~~~i~~gG~DQ~~~~~l~rdl~~k~ 173 (291)
T pfam00579 124 ----LKQNP--GIS-----LGEFTYPLLQAADILLL-------------------KADLQPGGSDQWGHIELGRDLARRF 173 (291)
T ss_pred ----HCCCC--CCC-----HHHHCCHHHHHCCCHHC-------------------CCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf ----42578--876-----65501521763230001-------------------4675665600489999999999995
Q ss_pred H---HCCCHHHHHHHHHHHHC-CCCCCCCCCCCH
Q ss_conf 1---00000101455531101-322122343302
Q gi|255764513|r 235 N---FPIPEFIHLPLIKNPDK-SKLSKRRNPTSI 264 (492)
Q Consensus 235 ~---~~~p~f~H~pli~~~~g-~klSKR~~~~~i 264 (492)
T Consensus 174 ~~~~~~~p~~l~~~ll~~~~G~~KMSKS~~nsaI 207 (291)
T pfam00579 174 NKKVFKKPVGLTNPLLTGLDGGKKMSKSAGNSAI 207 (291)
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEE
T ss_conf 7856788348741662266787663678999726