HHsearch results for GI: 255764513 and protein with PDBid: 1yi8_B
>1yi8_B Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2.10A {Deinococcus radiodurans R1} PDB: 1yia_B* 1yid_B* 2a4m_A*
Probab=98.30 E-value=0.00022 Score=48.60 Aligned_cols=201 Identities=18% Similarity=0.202 Sum_probs=113.0
Q ss_pred CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC-------CCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 7056348433887850159999999999997188499997048-------666388679999999988658988867655
Q gi|255764513|r 6 KVRVRIAPSPTGEPHIGTAYTALFNYLIAKRTGGKFILRIEDT-------DSKRSTLESENAVMQSLKWCGLNWDEGPDI 78 (492)
Q Consensus 6 ~v~~RfaPsPtG~lH~G~~rtal~n~l~a~~~~g~f~lRieDt-------d~~R~~~~~~~~i~~~l~wlgl~~De~~~~ 78 (492)
.|-|=|. |||.+||||.-.|+.+|..- |.+|..++=|=|. |......+.....+.++--+|++++...
T Consensus 24 rv~tG~~--PSG~~HlG~~l~~~~~~~~l-Q~~~~~~i~IaD~ha~t~~~~~~~~~r~~~~~~~~~~lA~G~Dp~k~~-- 98 (351)
T 1yi8_B 24 RVLTGDR--PTGALHLGHLAGSLQNRVRL-QDEAELFVLLADVQALTDHFDRPEQVRENVLAVALDYLAAGLDPQKTT-- 98 (351)
T ss_dssp EEEEEEC--CSSCCBHHHHHHTHHHHHHH-TSSSEEEEEECHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCTTTEE--
T ss_pred EEEECCC--CCCCCHHHHHHHHHHHHHHH-HCCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE--
T ss_conf 8996638--89726268789999999998-757988999815367616999999999999999999998069931043--
Q ss_pred CCCCCCEECCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEE
Q ss_conf 88767632326289999999999988982451488999776688766431000236655578833300112025774078
Q gi|255764513|r 79 GGAYGPYRQSERKNIYQPYVQNLLEKKLAFRCFCSTERLEEMRRAQRKRNIPSRYDGHCLKLSSQEIERLSQEQKKHVVR 158 (492)
Q Consensus 79 ~g~~~p~~QS~r~~~y~~~~~~L~~~g~aY~c~~t~eel~~~r~~~~~~~~~~~Y~~~~r~l~~~e~~~~~~~g~~~~iR 158 (492)
.|+||+-.+.+.-.... -|.++--++...... ... .. ....
T Consensus 99 -----i~~qS~~~~~~el~~~~--------~~~~~~~~l~~~~~~--~~~----------------~~-~~~~------- 139 (351)
T 1yi8_B 99 -----CVVQSAVPELAELTVYF--------LNLVTVSHLRQNPTV--KAE----------------IA-QKGY------- 139 (351)
T ss_dssp -----EEEGGGCTHHHHHHHHH--------HTTSBHHHHHTCHHH--HHH----------------HH-HHTC-------
T ss_pred -----EEECCCHHHHHHHHHHH--------HHHHHHHHHHHHHHH--HHH----------------HC-CCCC-------
T ss_conf -----77355113578899999--------876445258887899--986----------------30-2366-------
Q ss_pred EEECCCCEEECCCCCCCCEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH--
Q ss_conf 862243114304751340213643235641000453248986788764444444311223543024788999998510--
Q gi|255764513|r 159 LTVPNQGSCVFQDKVYGEMEIPWNAVDMQVLLKSDGMPTYHLANVIDDHLMKITHVARGEEWISSVPKHILLYQYFNF-- 236 (492)
Q Consensus 159 ~k~p~~~~~~~~D~i~G~~~~~~~~~~D~vi~r~dg~ptY~~a~vvDD~~m~ithviRg~d~~~~t~~q~~l~~al~~-- 236 (492)
.+ -+ +=|..+|-.--+-|=...+.++|.=|+|-...--.-..|.+.+|+
T Consensus 140 -----------~~---------------~~---~~g~~~YP~lQaaDi~~~~~divpvG~DQ~~h~~LaRdia~~~n~~~ 190 (351)
T 1yi8_B 140 -----------GE---------------RV---PAGFFVYPVSQAADIAAFGATLVPVGDDQLPMLEQTREIVRRFNALY 190 (351)
T ss_dssp -----------TT---------------CC---BHHHHHHHHHHHHHHHHHTCSEEEECGGGHHHHHHHHHHHHHHHHHT
T ss_pred -----------CC---------------CC---CCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf -----------66---------------77---73445550876514654055446776237999999999999954004
Q ss_pred ------CCCHHHHHHHHHHHHC-CCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHC
Q ss_conf ------0000101455531101-32212234330245666297737799899850
Q gi|255764513|r 237 ------PIPEFIHLPLIKNPDK-SKLSKRRNPTSISYYSAMGYLPEALINFLALL 284 (492)
Q Consensus 237 ------~~p~f~H~pli~~~~g-~klSKR~~~~~i~~~~~~GylPeAilNyLalL 284 (492)
+.|...|++.+.+.+| +|+||..+.. |. +-+ .|+.|..=+...
T Consensus 191 ~~~~~~P~~~~~~~~~l~gL~g~~KmSkS~~~~-I~-l~D---~~~~I~kKI~ka 240 (351)
T 1yi8_B 191 APVLAEPQAQLSRVPRLPGLDGQAKMSKSLGNA-IA-LGD---SADEVARKVMGM 240 (351)
T ss_dssp CSCSCCCEEEECSSCSCCCTTSSSCCCTTTTCC-CB-TTC---CHHHHHHHHHTC
T ss_pred CCCCCCCHHHHHHCCCCCCCCCCHHCCCCCCCC-CC-CCC---CHHHHHHHHHHC
T ss_conf 776678667764134565777501103685334-67-789---999999998712