>gnl|CDD|161880 TIGR00440, glnS, glutaminyl-tRNA synthetase. This protein is a relatively rare aminoacyl-tRNA synthetase, found in the cytosolic compartment of eukaryotes, in E. coli and a number of other Gram-negative Bacteria, and in Deinococcus radiodurans. In contrast, the pathway to Gln-tRNA in mitochondria, Archaea, Gram-positive Bacteria, and a number of other lineages is by misacylation with Glu followed by transamidation to correct the aminoacylation to Gln. This enzyme is a class I tRNA synthetase (hit by the pfam model tRNA-synt_1c) and is quite closely related to glutamyl-tRNA synthetases. Length = 522

Score = 61.5 bits (149), Expect = 5e-10 Identities = 79/341 (23%), Positives = 132/341 (38%), Gaps = 41/341 (12%) Query: 7 VRVRIAPSPTGEPHIGTAYTALFNYLIAKRTGGKFILRIEDTDSKRSTLESENAVMQSLK 66 V R P P G HIG A + N+ AK G LR +DT+ + E ++ + ++ Sbjct: 1 VHTRFPPEPNGYLHIGHAKSICLNFGYAKYYNGTCNLRFDDTNPVKEDPEYVESIKRDVE 60 Query: 67 WCGLNWDEGPDIGGAYGPYRQSERKNIYQPYVQNLLEKKLAFRCFCSTERLEEMRRAQRK 126 W G W+ Y + + R Y + L++K LA+ + E + E R Sbjct: 61 WLGFKWEGKIRYSSDY--FDELYR------YAEELIKKGLAYVDELTPEEIREYRGTLTD 112 Query: 127 RNIPSRYDGHCLKLSSQEIERLSQ---EQKKHVVRLTVP-NQGSCVFQDKVYGEMEIPWN 182 S Y ++ + E++ ++ K ++R + V +D V ++ Sbjct: 113 PGKNSPYRDRSIEENLALFEKMRDGKFKEGKAILRAKIDMASPFPVMRDPVAYRIK---F 169 Query: 183 AVDMQVLLKSDGMPTYHLANVIDDHLMKITH-VARGEEWISSVPKHILLYQYFNFPIP-- 239 A Q K P Y + I D + ITH + E + +L FP P Sbjct: 170 APHHQTGTKWCIYPMYDFTHCISDAMENITHSLCTLEFQDNRRLYDWVLDNIHIFPRPAQ 229 Query: 240 -EFIHLPLIKNPDKSKLSKR-----------------RNPTSISYYSAMGYLPEALINFL 281 EF L N + + LSKR R PT IS GY P ++ F Sbjct: 230 YEFSRL----NLEGTVLSKRKLAQLVDDKFVRGWDDPRMPT-ISGLRRRGYTPASIREFC 284 Query: 282 ALLFVHKSEDDDELMDMQQLIHHFDLHHLSKAGAVFDKQKL 322 + V K +++ E++ ++ I + +A AV D ++ Sbjct: 285 NRIGVTKQDNNIEVVRLESCIREDLNENAPRAMAVIDPVEV 325

RPSBLAST alignment for GI: 255764513 and conserved domain: TIGR00440