HHsearch alignment for GI: 255764514 and conserved domain: COG4988

>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].

Probab=97.39  E-value=0.00016  Score=48.80  Aligned_cols=68  Identities=21%  Similarity=0.185  Sum_probs=34.2

Q ss_pred             EEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECHHH
Q ss_conf             10127899831135440621579999999998436689976998034468887999999999999730593999808379
Q gi|255764514|r  412 YVQTNRGENPGPLMKLASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQLSKKIQLLAVTHAPQ  491 (554)
Q Consensus       412 ~~s~n~g~~~~pl~kiaSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~ls~~~Qvi~ITH~pq  491 (554)
T Consensus       341 ~~t~~~g~~talv--G~SGaGKS-TLl~lL~G~~~-~~~G~I~vng~~l-----------~~l~~~~~~k~i~~v~Q~p~  405 (559)
T COG4988         341 NLTIKAGQLTALV--GASGAGKS-TLLNLLLGFLA-PTQGEIRVNGIDL-----------RDLSPEAWRKQISWVSQNPY  405 (559)
T ss_pred             EEEECCCCEEEEE--CCCCCCHH-HHHHHHHCCCC-CCCCEEEECCCCC-----------CCCCHHHHHHHEEEECCCCC
T ss_conf             0675489679998--89999789-99999847577-7784488899310-----------00687788867246279984


Q ss_pred             HHH
Q ss_conf             865
Q gi|255764514|r  492 VAA  494 (554)
Q Consensus       492 vAa  494 (554)
T Consensus       406 lf~  408 (559)
T COG4988         406 LFA  408 (559)
T ss_pred             CCC
T ss_conf             056