HHsearch alignment for GI: 255764514 and conserved domain: PRK00064
>PRK00064 recF recombination protein F; Reviewed.
Probab=99.93 E-value=1.6e-21 Score=160.90 Aligned_cols=151 Identities=21% Similarity=0.252 Sum_probs=108.1
Q ss_pred CCEEEEECCEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC-----CCCCCCCCCEEEEEEEEECCCCHHH
Q ss_conf 92599942278999988738981899889997888999999987147325-----3311289725899999972897378
Q gi|255764514|r 1 MTRLSIYNIVLIESLDIDFSAGLSILSGDTGSGKSILLDALILVTGGRGD-----GGLVRRHAEKGQVVAVFEISHLPAL 75 (554)
Q Consensus 1 L~~L~i~Nf~~i~~~~i~f~~Gl~vItGetGaGKS~ildAl~~~lG~r~~-----~~~Ir~g~~~a~Ve~~F~~~~~~~~ 75 (554)
T Consensus 3 i~~L~l~nFRn~~~~~l~~~~~~n~i~G~NGsGKTnlLEAI~~L~~grSfR~~~~~~li~~~~~~~~v~a~~~~~~---- 78 (355)
T PRK00064 3 LTRLSLTDFRNYEELDLELSPGVNVLVGENGQGKTNLLEAIYLLAPGRSHRTARDKELIRFGAEAAVVHARVQKGG---- 78 (355)
T ss_pred ECEEEEECCCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEEEEEEEEECC----
T ss_conf 0878873655985347834998089999998888999999999848988888986999728998789999998389----
Q ss_pred HHHHHHCCCCCCCCEEEEEEEECCCCEEEEECCEEEEC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 88887478988883899999943897799999988410-11222111000001220000000036787777663000013
Q gi|255764514|r 76 EILFAEANLTLEKHVILRRVQFPDGRTKAYVNDQVVSV-NFMRAVGSLLIEIHSQHADRSLLDVQGHRKILDSYADIDLS 154 (554)
Q Consensus 76 ~~~~~~~~~~~~~~~iirR~i~~~GkS~~~INg~~v~~-~~L~~l~~~lidi~gQ~e~~~Ll~~~~q~~lLD~~~~~~~~ 154 (554)
T Consensus 79 ------------~~~~i~i~~~~~~~~~~~ing~~~~~~s~l~~~lp~v-~~~P~~~~li~g~p~~RR~flD~~~~~~-- 143 (355)
T PRK00064 79 ------------GELPLGLEISRKGKRRVRINGEPQRKLSELAGLLNVV-LFTPEDLRLVKGGPSERRRFLDRLLFQI-- 143 (355)
T ss_pred ------------CEEEEEEEECCCCCEEEEECCEECCCHHHHHHHCCEE-EECCCHHHHHCCCHHHHHHHHHHHHHHC--
T ss_conf ------------2589999983699659999992164789997228699-9863557676079789999978765524--
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 8999999999999998
Q gi|255764514|r 155 LCELGTLYRHWCCTAD 170 (554)
Q Consensus 155 ~~~~~~~~~~~~~~~~ 170 (554)
T Consensus 144 ~~~y~~~l~~y~k~Lk 159 (355)
T PRK00064 144 EPVYASALSQYERALK 159 (355)
T ss_pred CHHHHHHHHHHHHHHH
T ss_conf 9189999999999999