HHsearch alignment for GI: 255764514 and conserved domain: TIGR03375
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=97.08 E-value=0.00032 Score=46.82 Aligned_cols=48 Identities=27% Similarity=0.308 Sum_probs=24.9
Q ss_pred CCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCC-CCEEEEECCCC
Q ss_conf 43200110127899831135440621579999999998436689-97699803446
Q gi|255764514|r 406 IDRVEFYVQTNRGENPGPLMKLASGGELSRFLLALKIVLVDQGS-IPTLVFDEVDS 460 (554)
Q Consensus 406 ~d~v~f~~s~n~g~~~~pl~kiaSGGE~Sr~~LAl~~~~~~~~~-~p~~ifDEiDa 460 (554)
T Consensus 481 l~~vsl~i~--~Ge~vaIvG--~sGsGKS-TL~kl--l~Gl~~p~~G~i~idg~~~ 529 (694)
T TIGR03375 481 LDNVSLTIR--PGEKVAIIG--RIGSGKS-TLLKL--LLGLYQPTEGSVLLDGVDI 529 (694)
T ss_pred HCCHHHEEC--CCCEEEEEE--CCCCCHH-HHHHH--HCCCCCCCCCEEEECCEEC
T ss_conf 136311887--997899980--5898788-99998--5567589988799898542