HHsearch alignment for GI: 255764514 and conserved domain: TIGR03522
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=97.69 E-value=7.3e-05 Score=51.00 Aligned_cols=75 Identities=20% Similarity=0.217 Sum_probs=62.4
Q ss_pred HHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHCCCEEEEEEE
Q ss_conf 4062157999999999843668997699803446888799999999999973059399980837986501761799996
Q gi|255764514|r 427 LASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQLSKKIQLLAVTHAPQVAARADRHFLVYKT 505 (554)
Q Consensus 427 iaSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~ls~~~Qvi~ITH~pqvAa~a~~h~~v~K~ 505 (554)
T Consensus 133 ~LS~G~kqrl~la~aL~----~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~~TillssH~l~e~e~lcdri~ii~~ 207 (301)
T TIGR03522 133 QLSKGYRQRVGLAQALI----HDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINK 207 (301)
T ss_pred HCCHHHHHHHHHHHHHC----CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCEEEEEEC
T ss_conf 77998844599889870----7998999948866789899999999999875999999987858999986999999989