HHsearch alignment for GI: 255764514 and conserved domain: cd03221
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=98.27 E-value=6.9e-06 Score=57.76 Aligned_cols=69 Identities=23% Similarity=0.269 Sum_probs=55.4
Q ss_pred HCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHH-HHCCCEEEE
Q ss_conf 062157999999999843668997699803446888799999999999973059399980837986-501761799
Q gi|255764514|r 428 ASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQLSKKIQLLAVTHAPQVA-ARADRHFLV 502 (554)
Q Consensus 428 aSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~ls~~~Qvi~ITH~pqvA-a~a~~h~~v 502 (554)
T Consensus 71 LSgGqkqr~~la~al~----~~p~iliLDEPt~~LD~~~~~~i~~~l~~~~~--tii~vsHd~~~~~~~~drii~l 140 (144)
T cd03221 71 LSGGEKMRLALAKLLL----ENPNLLLLDEPTNHLDLESIEALEEALKEYPG--TVILVSHDRYFLDQVATKIIEL 140 (144)
T ss_pred CCHHHHHHHHHHHHHC----CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHCCEEEEE
T ss_conf 7999999999999972----59989999577555899999999999997099--9999967989999879999999