HHsearch alignment for GI: 255764514 and conserved domain: cd03225
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=98.39 E-value=3.3e-06 Score=59.85 Aligned_cols=72 Identities=26% Similarity=0.288 Sum_probs=60.7
Q ss_pred HCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC-CEEEEECHHHHH-HHCCCEEEEE
Q ss_conf 062157999999999843668997699803446888799999999999973059-399980837986-5017617999
Q gi|255764514|r 428 ASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQLSKKI-QLLAVTHAPQVA-ARADRHFLVY 503 (554)
Q Consensus 428 aSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~ls~~~-Qvi~ITH~pqvA-a~a~~h~~v~ 503 (554)
T Consensus 135 LSGGqkQrv~iAral~----~~P~ililDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~itHdl~~~~~~~dri~~m~ 208 (211)
T cd03225 135 LSGGQKQRVAIAGVLA----MDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLE 208 (211)
T ss_pred CCHHHHHHHHHHHHHH----CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEEE
T ss_conf 9998999999999997----5999999979855589999999999999999789999999259999999799999982