HHsearch alignment for GI: 255764514 and conserved domain: cd03230
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.84 E-value=4.4e-05 Score=52.45 Aligned_cols=39 Identities=18% Similarity=0.372 Sum_probs=32.8
Q ss_pred ECCEEEEEEEEECCCC-EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 4227899998873898-18998899978889999999871
Q gi|255764514|r 7 YNIVLIESLDIDFSAG-LSILSGDTGSGKSILLDALILVT 45 (554)
Q Consensus 7 ~Nf~~i~~~~i~f~~G-l~vItGetGaGKS~ildAl~~~l 45 (554)
T Consensus 11 g~~~~L~~vsl~i~~Gei~gl~G~NGaGKSTLl~~i~Gl~ 50 (173)
T cd03230 11 GKKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLL 50 (173)
T ss_pred CCEEEEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 9999982208788799399998789979999999997685