HHsearch alignment for GI: 255764514 and conserved domain: cd03246
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=98.55 E-value=5.5e-07 Score=65.00 Aligned_cols=72 Identities=28% Similarity=0.371 Sum_probs=61.3
Q ss_pred HCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH-HCCCEEEEECHHHHHHHCCCEEEEE
Q ss_conf 062157999999999843668997699803446888799999999999973-0593999808379865017617999
Q gi|255764514|r 428 ASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQLS-KKIQLLAVTHAPQVAARADRHFLVY 503 (554)
Q Consensus 428 aSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~ls-~~~Qvi~ITH~pqvAa~a~~h~~v~ 503 (554)
T Consensus 97 LSGGQkQRvalARal~----~~p~ililDEpts~LD~~~e~~i~~~l~~l~~~~~Tvi~vtH~~~~~~~aD~Iivl~ 169 (173)
T cd03246 97 LSGGQRQRLGLARALY----GNPRILVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLE 169 (173)
T ss_pred CCHHHHHHHHHHHHHH----CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCEEEEEE
T ss_conf 7699999999999982----799999996876689989999999999978648989999847999998499999993