HHsearch alignment for GI: 255764514 and conserved domain: cd03251

>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=98.64  E-value=4e-07  Score=65.93  Aligned_cols=73  Identities=23%  Similarity=0.355  Sum_probs=64.9

Q ss_pred             HCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHCCCEEEEEE
Q ss_conf             06215799999999984366899769980344688879999999999997305939998083798650176179999
Q gi|255764514|r  428 ASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQLSKKIQLLAVTHAPQVAARADRHFLVYK  504 (554)
Q Consensus       428 aSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~ls~~~Qvi~ITH~pqvAa~a~~h~~v~K  504 (554)
T Consensus       139 LSgGQ~QRi~lARal~----~~~~iliLDEpts~LD~~~e~~i~~~l~~~~~~~TvI~itH~l~~l~~~D~Iivl~~  211 (234)
T cd03251         139 LSGGQRQRIAIARALL----KDPPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLED  211 (234)
T ss_pred             CCHHHHHHHHHHHHHH----CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEEC
T ss_conf             8999999999999996----499989996876689989999999999998199989999278889985999999989