HHsearch alignment for GI: 255764514 and conserved domain: cd03267
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=97.69 E-value=5e-05 Score=52.11 Aligned_cols=38 Identities=18% Similarity=0.352 Sum_probs=31.7
Q ss_pred CCEEEEEEEEECCCC-EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 227899998873898-18998899978889999999871
Q gi|255764514|r 8 NIVLIESLDIDFSAG-LSILSGDTGSGKSILLDALILVT 45 (554)
Q Consensus 8 Nf~~i~~~~i~f~~G-l~vItGetGaGKS~ildAl~~~l 45 (554)
T Consensus 33 ~~~al~~vsf~i~~Gei~gLlGpNGaGKSTllk~l~Gl~ 71 (236)
T cd03267 33 EVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLL 71 (236)
T ss_pred CEEEECCCEEEECCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 989866805788489599999999830999999996494