HHsearch alignment for GI: 255764514 and conserved domain: cd03290
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=98.08 E-value=2.8e-05 Score=53.70 Aligned_cols=72 Identities=26% Similarity=0.248 Sum_probs=54.5
Q ss_pred HCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHH-H-HHHHHHH-CCCEEEEECHHHHHHHCCCEEEEE
Q ss_conf 06215799999999984366899769980344688879999999-9-9999730-593999808379865017617999
Q gi|255764514|r 428 ASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIG-Y-RLKQLSK-KIQLLAVTHAPQVAARADRHFLVY 503 (554)
Q Consensus 428 aSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~-~-~l~~ls~-~~Qvi~ITH~pqvAa~a~~h~~v~ 503 (554)
T Consensus 141 LSGGQ~QRi~iARal~----~~~~illlDEptsaLD~~~~~~i~~~~i~~~~~~~~~TvI~itH~l~~l~~aD~Iivm~ 215 (218)
T cd03290 141 LSGGQRQRICVARALY----QNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMK 215 (218)
T ss_pred CCHHHHHHHHHHHHHH----HCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCEEEEEC
T ss_conf 7989999999999984----48999999896557886789999999999997079939999906988998399999985