HHsearch alignment for GI: 255764514 and conserved domain: cd03293

>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.77  E-value=4.1e-05  Score=52.65  Aligned_cols=37  Identities=27%  Similarity=0.516  Sum_probs=31.3

Q ss_pred             CEEEEEEEEECCCC-EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             27899998873898-18998899978889999999871
Q gi|255764514|r    9 IVLIESLDIDFSAG-LSILSGDTGSGKSILLDALILVT   45 (554)
Q Consensus         9 f~~i~~~~i~f~~G-l~vItGetGaGKS~ildAl~~~l   45 (554)
T Consensus        17 ~~al~~vsl~i~~Ge~~~iiGpsGsGKSTLl~~i~Gl~   54 (220)
T cd03293          17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLE   54 (220)
T ss_pred             EEEEECEEEEECCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf             99996718898799899999999957999999997599