HHsearch alignment for GI: 255764514 and conserved domain: cd03295
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.82 E-value=0.00022 Score=47.85 Aligned_cols=72 Identities=26% Similarity=0.304 Sum_probs=59.5
Q ss_pred HCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEECHHHHHH-HCCCEEEEE
Q ss_conf 0621579999999998436689976998034468887999999999999730--593999808379865-017617999
Q gi|255764514|r 428 ASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQLSK--KIQLLAVTHAPQVAA-RADRHFLVY 503 (554)
Q Consensus 428 aSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~ls~--~~Qvi~ITH~pqvAa-~a~~h~~v~ 503 (554)
T Consensus 136 LSGGqkQRvaiARAl~----~~P~ilLlDEP~saLD~~~~~~i~~~l~~l~~~~~~T~i~vTHd~~ea~~~aDri~vm~ 210 (242)
T cd03295 136 LSGGQQQRVGVARALA----ADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred CCHHHHHHHHHHHHHH----CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCEEEEEE
T ss_conf 8999999999999996----29999998187654698999999999999999759999999989999999699899998