HHsearch alignment for GI: 255764514 and conserved domain: cd03298
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.64 E-value=6.6e-05 Score=51.30 Aligned_cols=32 Identities=34% Similarity=0.660 Sum_probs=26.5
Q ss_pred EEEEECCCC-EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 998873898-18998899978889999999871
Q gi|255764514|r 14 SLDIDFSAG-LSILSGDTGSGKSILLDALILVT 45 (554)
Q Consensus 14 ~~~i~f~~G-l~vItGetGaGKS~ildAl~~~l 45 (554)
T Consensus 16 ~i~l~i~~Ge~~~ilGpSGsGKSTLl~li~Gl~ 48 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFE 48 (211)
T ss_pred EEEEEECCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 278898899899999999955999999997699