RPSBLAST alignment for GI: 255764514 and conserved domain: pfam02463
>gnl|CDD|145545 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain. This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162
Score = 41.9 bits (98), Expect = 5e-04
Identities = 61/349 (17%), Positives = 110/349 (31%), Gaps = 20/349 (5%)
Query: 169 ADALKKYQEQKSSSQDVEFLRFSIDELQALAVQPGEENELVVMRSKILKQERIAVELSSI 228
+ L QE+K +++E L + E Q L EE E + + + +
Sbjct: 820 EEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEE 879
Query: 229 MDDF---HKSSSPISVISSMLRRLERKSTEVPDLLQKSISFLNEAQENLSDAQHEIERSF 285
+++ + S + LE +S + L +K E
Sbjct: 880 LEEQKLKDELESKEEKEKEEKKELEEESQKDNLLEEKENEIEERIAEEAIILLKYES--E 937
Query: 286 SEIQYDAQELANIEERLFALRAMSRKYSVSIDQLPELAKKMEEDLADISEGNEKVVSLER 345
E + +E R + EL +A+ E E+ E
Sbjct: 938 PEELLLEEADEKEKEEDNKEEEEERNKRLL-LAKEELGNVNLMAIAEFEEKEERYNKDEL 996
Query: 346 VLYEARQAYDRVAQ-DISTKRYQFAKMLEKNVMAEMPALKLENVCFTVNIT----SDKED 400
+ + + I +F + LE V K+ D +D
Sbjct: 997 KKERLEEEKKELLREIIEETCQRFKEFLELFVSINRGLNKVFFYLELGGSAELRLEDSDD 1056
Query: 401 ISPDGIDRVEFYVQTNRGENPGPLMKLASGGELSRFLLALKIVLVDQGSIPT--LVFDEV 458
GI + + SGGE + L+AL ++ Q P + DE+
Sbjct: 1057 PFSGGI-----EISARPPGKGVKNLDNLSGGEKT--LVALALIFAIQKYRPAPFYLLDEI 1109
Query: 459 DSGIGGAVADAIGYRLKQLSKKIQLLAVTHAPQVAARADRHFLVYKTNK 507
D+ + + LK+LSK Q + ++ ++ +ADR VY
Sbjct: 1110 DAALDDQNVSRVANYLKELSKNAQFIVISLREEMLEKADRLVGVYMVEN 1158