HHsearch alignment for GI: 255764515 and conserved domain: COG2812
>COG2812 DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair].
Probab=92.74 E-value=0.4 Score=25.06 Aligned_cols=112 Identities=15% Similarity=0.161 Sum_probs=54.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCEEE
Q ss_conf 09995889986899999999999759994999916046569999999985588881599985897898887307798699
Q gi|255764515|r 20 CAIWASMGSGKTVSVLTALSYIHLWGEKSVLVIAPLRVAQSVWTSEVQRWSNFSHMNISVITGTVKQRTKVLKTPAVLYV 99 (458)
Q Consensus 20 ~ll~~~~G~GKT~~al~~~~~l~~~~~~~~LIv~P~~l~~~~W~~Ei~kf~~~~~~~~~~~~g~~~~r~~~~~~~~~i~i 99 (458)
T Consensus 41 YlfsG~RGvGKTt~Ari~AkalNC~~~-~--~~ePC~~C~~--Ck~I~~---g~~~DviEiDaASn~------------- 99 (515)
T COG2812 41 YLFSGPRGVGKTTIARILAKALNCENG-P--TAEPCGKCIS--CKEINE---GSLIDVIEIDAASNT------------- 99 (515)
T ss_pred HHHCCCCCCCCHHHHHHHHHHHCCCCC-C--CCCCCHHHHH--HHHHHC---CCCCCCHHHHHHHCC-------------
T ss_conf 651377776710499999999568898-7--7772253166--686514---886410113644454-------------
Q ss_pred ECCCCHHHHHHHCC---CCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEECCC
Q ss_conf 80642023344200---0113220440453100246543115677776654305-9807996584
Q gi|255764515|r 100 INFENLGWLVQELK---GTWPFATIVVDESTKLKSFRLRQGSKTARALAKPAWE-SERFIELTGT 160 (458)
Q Consensus 100 ~s~e~~~~~~~~~~---~~~~~~~iIiDEaH~lkn~~~~~~s~~~~~l~~~~~~-~~~~l~LTgT 160 (458)
T Consensus 100 -gVddiR~i~e~v~y~P~~~ryKVyiIDEvHMLS-------~~afNALLKTLEEPP~hV~FIlAT 156 (515)
T COG2812 100 -GVDDIREIIEKVNYAPSEGRYKVYIIDEVHMLS-------KQAFNALLKTLEEPPSHVKFILAT 156 (515)
T ss_pred -CHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHH-------HHHHHHHHCCCCCCCCCEEEEEEC
T ss_conf -867999999872468866664189983187643-------788888751113686674899853