HHsearch alignment for GI: 255764515 and conserved domain: COG3972
>COG3972 Superfamily I DNA and RNA helicases [General function prediction only].
Probab=90.76 E-value=1 Score=22.57 Aligned_cols=138 Identities=13% Similarity=0.100 Sum_probs=65.1
Q ss_pred CCCCHHHHHHHHHHHHH-HCCCCCEEEEECCHHHHHHHHHHHHHHC-----CCCCCE-EEEEECCH---H-HHHHHHCCC
Q ss_conf 89986899999999999-7599949999160465699999999855-----888815-99985897---8-988873077
Q gi|255764515|r 26 MGSGKTVSVLTALSYIH-LWGEKSVLVIAPLRVAQSVWTSEVQRWS-----NFSHMN-ISVITGTV---K-QRTKVLKTP 94 (458)
Q Consensus 26 ~G~GKT~~al~~~~~l~-~~~~~~~LIv~P~~l~~~~W~~Ei~kf~-----~~~~~~-~~~~~g~~---~-~r~~~~~~~ 94 (458)
T Consensus 185 AGSGKT~~La~Kaa~lh~knPd~~I~~Tfftk~L~s~~r~lv~~F~f~~~e~~pdW~~~l~~h~wgG~t~~g~y~~~~~~ 264 (660)
T COG3972 185 AGSGKTELLAHKAAELHSKNPDSRIAFTFFTKILASTMRTLVPEFFFMRVEKQPDWGTKLFCHNWGGLTKEGFYGMYRYI 264 (660)
T ss_pred CCCCCHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHH
T ss_conf 47873029887778974479986389986667888999999999999886248872426888435787888603889998
Q ss_pred CCEEEECCCC----HHHH----HHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHH--
Q ss_conf 9869980642----0233----44200011322044045310024654311567777665430598079965840231--
Q gi|255764515|r 95 AVLYVINFEN----LGWL----VQELKGTWPFATIVVDESTKLKSFRLRQGSKTARALAKPAWESERFIELTGTPSPN-- 164 (458)
Q Consensus 95 ~~i~i~s~e~----~~~~----~~~~~~~~~~~~iIiDEaH~lkn~~~~~~s~~~~~l~~~~~~~~~~l~LTgTPi~n-- 164 (458)
T Consensus 265 ~~~~~~~fsg~g~~F~~aC~eli~~~~~~~~yD~ilIDE~QDF-------P~~F~~Lcf~~tkd~-KrlvyAyDelQNls 336 (660)
T COG3972 265 CHYYEIPFSGFGNGFDAACKELIADINNKKAYDYILIDESQDF-------PQSFIDLCFMVTKDK-KRLVYAYDELQNLS 336 (660)
T ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCC-------CHHHHHHHHHHHCCC-CEEEEEHHHHHCCC
T ss_conf 4266545478774067999999986425642317994245547-------789999999982475-43898657643111
Q ss_pred -----HCCCHHH
Q ss_conf -----0010134
Q gi|255764515|r 165 -----GLIDLWG 171 (458)
Q Consensus 165 -----~~~el~~ 171 (458)
T Consensus 337 ~~~m~ppe~iFg 348 (660)
T COG3972 337 NVKMRPPEEIFG 348 (660)
T ss_pred CCCCCCHHHHCC
T ss_conf 567799899648