HHsearch alignment for GI: 255764515 and conserved domain: COG3972

>COG3972 Superfamily I DNA and RNA helicases [General function prediction only].
Probab=90.76  E-value=1  Score=22.57  Aligned_cols=138  Identities=13%  Similarity=0.100  Sum_probs=65.1

Q ss_pred             CCCCHHHHHHHHHHHHH-HCCCCCEEEEECCHHHHHHHHHHHHHHC-----CCCCCE-EEEEECCH---H-HHHHHHCCC
Q ss_conf             89986899999999999-7599949999160465699999999855-----888815-99985897---8-988873077
Q gi|255764515|r   26 MGSGKTVSVLTALSYIH-LWGEKSVLVIAPLRVAQSVWTSEVQRWS-----NFSHMN-ISVITGTV---K-QRTKVLKTP   94 (458)
Q Consensus        26 ~G~GKT~~al~~~~~l~-~~~~~~~LIv~P~~l~~~~W~~Ei~kf~-----~~~~~~-~~~~~g~~---~-~r~~~~~~~   94 (458)
T Consensus       185 AGSGKT~~La~Kaa~lh~knPd~~I~~Tfftk~L~s~~r~lv~~F~f~~~e~~pdW~~~l~~h~wgG~t~~g~y~~~~~~  264 (660)
T COG3972         185 AGSGKTELLAHKAAELHSKNPDSRIAFTFFTKILASTMRTLVPEFFFMRVEKQPDWGTKLFCHNWGGLTKEGFYGMYRYI  264 (660)
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHH
T ss_conf             47873029887778974479986389986667888999999999999886248872426888435787888603889998


Q ss_pred             CCEEEECCCC----HHHH----HHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHH--
Q ss_conf             9869980642----0233----44200011322044045310024654311567777665430598079965840231--
Q gi|255764515|r   95 AVLYVINFEN----LGWL----VQELKGTWPFATIVVDESTKLKSFRLRQGSKTARALAKPAWESERFIELTGTPSPN--  164 (458)
Q Consensus        95 ~~i~i~s~e~----~~~~----~~~~~~~~~~~~iIiDEaH~lkn~~~~~~s~~~~~l~~~~~~~~~~l~LTgTPi~n--  164 (458)
T Consensus       265 ~~~~~~~fsg~g~~F~~aC~eli~~~~~~~~yD~ilIDE~QDF-------P~~F~~Lcf~~tkd~-KrlvyAyDelQNls  336 (660)
T COG3972         265 CHYYEIPFSGFGNGFDAACKELIADINNKKAYDYILIDESQDF-------PQSFIDLCFMVTKDK-KRLVYAYDELQNLS  336 (660)
T ss_pred             HCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCC-------CHHHHHHHHHHHCCC-CEEEEEHHHHHCCC
T ss_conf             4266545478774067999999986425642317994245547-------789999999982475-43898657643111


Q ss_pred             -----HCCCHHH
Q ss_conf             -----0010134
Q gi|255764515|r  165 -----GLIDLWG  171 (458)
Q Consensus       165 -----~~~el~~  171 (458)
T Consensus       337 ~~~m~ppe~iFg  348 (660)
T COG3972         337 NVKMRPPEEIFG  348 (660)
T ss_pred             CCCCCCHHHHCC
T ss_conf             567799899648