HHsearch alignment for GI: 255764515 and conserved domain: PRK00254
>PRK00254 ski2-like helicase; Provisional.
Probab=99.95 E-value=2.6e-25 Score=171.62 Aligned_cols=165 Identities=19% Similarity=0.210 Sum_probs=113.0
Q ss_pred CCCHHHHHHHHH-HHHCCCEEEEECCCCCHHHHHHHHH-HHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 874789999999-9967980999588998689999999-99997599949999160465699999999855888815999
Q gi|255764515|r 2 NLAPHQTKIVDW-ILDHKRCAIWASMGSGKTVSVLTAL-SYIHLWGEKSVLVIAPLRVAQSVWTSEVQRWSNFSHMNISV 79 (458)
Q Consensus 2 ~L~p~Q~~~v~~-~~~~~~~ll~~~~G~GKT~~al~~~-~~l~~~~~~~~LIv~P~~l~~~~W~~Ei~kf~~~~~~~~~~ 79 (458)
T Consensus 23 ~l~p~Q~e~l~~g~~~g~NllvsaPT~sGKTlvAElail~~~l~-~~~k~iyi~P~kALa~EK~~~f~~~~-~~g~~V~~ 100 (717)
T PRK00254 23 ELYPPQAEALTSGVLEGKNLLIAIPTASGKTLIAEIAMVNKLLR-EGGKAVYLVPLKALAEEKFREFKDWE-VLGLRVAM 100 (717)
T ss_pred CCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHH-CCCEEEEECCHHHHHHHHHHHHHHHH-HCCCEEEE
T ss_conf 26899999987423369818998998874899999999999985-29929999267999999999998777-44988989
Q ss_pred EECCHHHHHHHHCCCCCEEEECCCCHHHHHHHCC-CCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 8589789888730779869980642023344200-011322044045310024654311567777665430598079965
Q gi|255764515|r 80 ITGTVKQRTKVLKTPAVLYVINFENLGWLVQELK-GTWPFATIVVDESTKLKSFRLRQGSKTARALAKPAWESERFIELT 158 (458)
Q Consensus 80 ~~g~~~~r~~~~~~~~~i~i~s~e~~~~~~~~~~-~~~~~~~iIiDEaH~lkn~~~~~~s~~~~~l~~~~~~~~~~l~LT 158 (458)
T Consensus 101 ~tGd~~~~~~-~l~~~dIiV~T~Ek~dsl~r~~~~~l~~i~lvViDEiH~igD~~--RG~~lE~~l~~l~-~~~qiIgLS 176 (717)
T PRK00254 101 ATGDYDSKDE-WLGKYDIIIATAEKFDSLLRHGSSWIKDVKLLVADEIHLIGSRD--RGATLEFILTHML-GRAQIIGLS 176 (717)
T ss_pred EECCCCCCCC-CCCCCCEEEECHHHHHHHHHCCHHHHHCCCEEEEECEEECCCCC--CHHHHHHHHHHHH-CCCEEEEEE
T ss_conf 7489888701-04689999988899999997162565326989997607888987--4099999999510-036699996
Q ss_pred CCCHHHHCCCHHHHHHHCC
Q ss_conf 8402310010134677517
Q gi|255764515|r 159 GTPSPNGLIDLWGQIWFLD 177 (458)
Q Consensus 159 gTPi~n~~~el~~ll~~l~ 177 (458)
T Consensus 177 AT-i~N-~~~l---a~WL~ 190 (717)
T PRK00254 177 AT-IGN-PEEL---AEWLN 190 (717)
T ss_pred EE-CCC-HHHH---HHHHC
T ss_conf 33-499-8999---99828