HHsearch alignment for GI: 255764515 and conserved domain: PRK04914
>PRK04914 ATP-dependent helicase HepA; Validated.
Probab=100.00 E-value=0 Score=394.46 Aligned_cols=408 Identities=17% Similarity=0.201 Sum_probs=252.3
Q ss_pred CCCCHHHHHHHHHHHHC--CCEEEEECCCCCHHHHHHHHHHHHHHCC-CCCEEEEECCHHHHHHHHHHHH-HHCCCCCCE
Q ss_conf 98747899999999967--9809995889986899999999999759-9949999160465699999999-855888815
Q gi|255764515|r 1 MNLAPHQTKIVDWILDH--KRCAIWASMGSGKTVSVLTALSYIHLWG-EKSVLVIAPLRVAQSVWTSEVQ-RWSNFSHMN 76 (458)
Q Consensus 1 ~~L~p~Q~~~v~~~~~~--~~~ll~~~~G~GKT~~al~~~~~l~~~~-~~~~LIv~P~~l~~~~W~~Ei~-kf~~~~~~~ 76 (458)
T Consensus 150 ~~l~pHQ~~ia~~v~~r~~PRvLLADEVGLGKTIEAGLIl~ell~rgra~RvLIvvP~~L~-~QW~~EL~~KF~----L~ 224 (955)
T PRK04914 150 AGLIPHQLYIAHEVGRRHAPRVLLADEVGLGKTIEAGLIIHQQLLTGRAERVLIIVPETLQ-HQWLVEMLRRFN----LR 224 (955)
T ss_pred CCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHH-HHHHHHHHHHCC----CC
T ss_conf 4656379999999971458848970588886899999999999974877779999277998-999999999839----98
Q ss_pred EEEEECCHHHHH--H--HHCCCCCEEEECCCCHHHHH--HHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 999858978988--8--73077986998064202334--42000113220440453100246543115677776654305
Q gi|255764515|r 77 ISVITGTVKQRT--K--VLKTPAVLYVINFENLGWLV--QELKGTWPFATIVVDESTKLKSFRLRQGSKTARALAKPAWE 150 (458)
Q Consensus 77 ~~~~~g~~~~r~--~--~~~~~~~i~i~s~e~~~~~~--~~~~~~~~~~~iIiDEaH~lkn~~~~~~s~~~~~l~~~~~~ 150 (458)
T Consensus 225 f~i~D~~r~~~~~~~~~NpF~~~~~vI~Sld~l~~~~~~~e~l~~a~WDLVIVDEAHhL~~~~~-~~s~~y~lve~La~~ 303 (955)
T PRK04914 225 FSLFDEERCAEAQADADNPFETEQLVICSLDFLRKNKKRLEQALDAEWDLLVVDEAHHLVWSEE-APSREYQVVEQLAEV 303 (955)
T ss_pred CEEECCHHHHHHHCCCCCCCCCCCEEEEEHHHHCCCHHHHHHHHCCCCCEEEEHHHHHHCCCCC-CCCHHHHHHHHHHHH
T ss_conf 0995518888753357997545897998789960396789987338988899713445305887-888799999999851
Q ss_pred CCEEEEECCCCHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHCCCHHHH---HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98079965840231001013467751788877532778877736956403300002---455554558999997424543
Q gi|255764515|r 151 SERFIELTGTPSPNGLIDLWGQIWFLDKGKRLGRVFQSFVARWFNTTQIGSHIGAV---RYTAKETAQKEIEAQLSDCCL 227 (458)
Q Consensus 151 ~~~~l~LTgTPi~n~~~el~~ll~~l~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~ 227 (458)
T Consensus 304 ~~~lLLLTATP~QlG~e~~Fa~L~LLDPdrF--~d~~~F~~e~~~y~~va~~v~~L~~~~~l~-~~~~~~l~~~l~e~~~ 380 (955)
T PRK04914 304 IPGVLLLTATPEQLGQESHFARLRLLDPDRF--HDYEAFVEEEQQYRPVADAVQALLDGEKLS-DDALNALGELLGEQDI 380 (955)
T ss_pred CCCEEEEECCCCCCCCHHHHHHHHCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHH
T ss_conf 5976998479988986668988527794211--588889988875578999999863156688-8999999998644114
Q ss_pred ------------------------------------HHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf ------------------------------------32000010010011000345245368998889999998510334
Q gi|255764515|r 228 ------------------------------------SLDIADYQNIDKPILITKKVPLPQPVMKQYHKFQRELYCDLQGE 271 (458)
Q Consensus 228 ------------------------------------~~~~~~~~~l~~~~~~~~~v~l~~~~~~~y~~~~~~~~~~~~~~ 271 (458)
T Consensus 381 ~~l~~~~~~~~~~~~~~r~~li~~Lldr~gtgrvlfRntRa~v~gfp~R~l~~~~l~~~~~~~~~~~----~~------- 449 (955)
T PRK04914 381 EPLLQAINSDSEDAQAARQELISELLDRHGTGRVLFRNTRAAVKGFPKRELHPYPLPLPEQYQTAIR----KS------- 449 (955)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHH----HH-------
T ss_conf 4789875214445699999999999862321577776567774316554531056787156787654----32-------
Q ss_pred CCHHHHHHHHHHHHH-HCCCCCC--CCCCCCCCHHCCCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHH---------
Q ss_conf 520223478888754-2035410--0022343000134333325665412488403422236788866410---------
Q gi|255764515|r 272 NIEAFNSASKTVKCL-QLANGAV--YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK--------- 339 (458)
Q Consensus 272 ~~~~~~~~~~~~~l~-q~~~~~~--~~~~~~~~~~~~~~k~~~l~~il~~~~~~kviif~~~~~~~~~i~~--------- 339 (458)
T Consensus 450 ---------~~~~~~~~l~~E~~~~~~~~~~~~~~~~D~rv~~Li~~Lk~~~~eKvLVFte~~~Ta~~L~~~Lr~~~Gi~ 520 (955)
T PRK04914 450 ---------LEARARDMLYPEQIYQEFEGDNATWWNFDPRVEWLIDFLKSHRSEKVLVICAKAETALQLEQALREREGIR 520 (955)
T ss_pred ---------HHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCC
T ss_conf ---------32467875173566654565565542138899999999985779858999683899999999998755995
Q ss_pred --CCCCCCCHHHHHHHHHHHCCCC--CCEEEEEHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHCCCC
Q ss_conf --0026533445899876424588--558998442211162200178599990899898686445666620220203787
Q gi|255764515|r 340 --AFPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 415 (458)
Q Consensus 340 --~~~~g~~~~~r~~~i~~f~~~~--~~vli~s~~~~~~GlnL~~a~~~iI~~~~~wn~~~~~Q~~gRi~~~r~hR~Gq~ 415 (458)
T Consensus 521 ~avfh~gms~~ERdraaa~Fa~~e~gaqVLI~T-EagsEG~NLQF-~~~LVnyDLPWNP~rLEQRIGRl-----DRiGQ~ 593 (955)
T PRK04914 521 AAVFHEGMSIIERDRAAAYFADEEDGAQVLLCS-EIGSEGRNFQF-ASHLVLFDLPFNPDLLEQRIGRL-----DRIGQK 593 (955)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEE-CCCCCCCCHHH-HHHHEECCCCCCHHHHHHHHHHH-----HHCCCC
T ss_conf 699709999899999999861767785199972-52124503777-43523525898765889985206-----542786
Q ss_pred CCEEEEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 75289999858996899999999999999
Q gi|255764515|r 416 RAVFVYYLIAQNTIDELVLQRLRTKSTIQ 444 (458)
Q Consensus 416 ~~v~v~~li~~~tide~i~~~~~~K~~~~ 444 (458)
T Consensus 594 ~dV~Ihvpy~~~s~q~~l~~wy~~gl~af 622 (955)
T PRK04914 594 HDIQIHVPYLEGTAQERLFRWYHEGLNAF 622 (955)
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 75079862028988999999999888897