HHsearch alignment for GI: 255764515 and conserved domain: PRK04914

>PRK04914 ATP-dependent helicase HepA; Validated.
Probab=100.00  E-value=0  Score=394.46  Aligned_cols=408  Identities=17%  Similarity=0.201  Sum_probs=252.3

Q ss_pred             CCCCHHHHHHHHHHHHC--CCEEEEECCCCCHHHHHHHHHHHHHHCC-CCCEEEEECCHHHHHHHHHHHH-HHCCCCCCE
Q ss_conf             98747899999999967--9809995889986899999999999759-9949999160465699999999-855888815
Q gi|255764515|r    1 MNLAPHQTKIVDWILDH--KRCAIWASMGSGKTVSVLTALSYIHLWG-EKSVLVIAPLRVAQSVWTSEVQ-RWSNFSHMN   76 (458)
Q Consensus         1 ~~L~p~Q~~~v~~~~~~--~~~ll~~~~G~GKT~~al~~~~~l~~~~-~~~~LIv~P~~l~~~~W~~Ei~-kf~~~~~~~   76 (458)
T Consensus       150 ~~l~pHQ~~ia~~v~~r~~PRvLLADEVGLGKTIEAGLIl~ell~rgra~RvLIvvP~~L~-~QW~~EL~~KF~----L~  224 (955)
T PRK04914        150 AGLIPHQLYIAHEVGRRHAPRVLLADEVGLGKTIEAGLIIHQQLLTGRAERVLIIVPETLQ-HQWLVEMLRRFN----LR  224 (955)
T ss_pred             CCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHH-HHHHHHHHHHCC----CC
T ss_conf             4656379999999971458848970588886899999999999974877779999277998-999999999839----98


Q ss_pred             EEEEECCHHHHH--H--HHCCCCCEEEECCCCHHHHH--HHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf             999858978988--8--73077986998064202334--42000113220440453100246543115677776654305
Q gi|255764515|r   77 ISVITGTVKQRT--K--VLKTPAVLYVINFENLGWLV--QELKGTWPFATIVVDESTKLKSFRLRQGSKTARALAKPAWE  150 (458)
Q Consensus        77 ~~~~~g~~~~r~--~--~~~~~~~i~i~s~e~~~~~~--~~~~~~~~~~~iIiDEaH~lkn~~~~~~s~~~~~l~~~~~~  150 (458)
T Consensus       225 f~i~D~~r~~~~~~~~~NpF~~~~~vI~Sld~l~~~~~~~e~l~~a~WDLVIVDEAHhL~~~~~-~~s~~y~lve~La~~  303 (955)
T PRK04914        225 FSLFDEERCAEAQADADNPFETEQLVICSLDFLRKNKKRLEQALDAEWDLLVVDEAHHLVWSEE-APSREYQVVEQLAEV  303 (955)
T ss_pred             CEEECCHHHHHHHCCCCCCCCCCCEEEEEHHHHCCCHHHHHHHHCCCCCEEEEHHHHHHCCCCC-CCCHHHHHHHHHHHH
T ss_conf             0995518888753357997545897998789960396789987338988899713445305887-888799999999851


Q ss_pred             CCEEEEECCCCHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHCCCHHHH---HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             98079965840231001013467751788877532778877736956403300002---455554558999997424543
Q gi|255764515|r  151 SERFIELTGTPSPNGLIDLWGQIWFLDKGKRLGRVFQSFVARWFNTTQIGSHIGAV---RYTAKETAQKEIEAQLSDCCL  227 (458)
Q Consensus       151 ~~~~l~LTgTPi~n~~~el~~ll~~l~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~  227 (458)
T Consensus       304 ~~~lLLLTATP~QlG~e~~Fa~L~LLDPdrF--~d~~~F~~e~~~y~~va~~v~~L~~~~~l~-~~~~~~l~~~l~e~~~  380 (955)
T PRK04914        304 IPGVLLLTATPEQLGQESHFARLRLLDPDRF--HDYEAFVEEEQQYRPVADAVQALLDGEKLS-DDALNALGELLGEQDI  380 (955)
T ss_pred             CCCEEEEECCCCCCCCHHHHHHHHCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHH
T ss_conf             5976998479988986668988527794211--588889988875578999999863156688-8999999998644114


Q ss_pred             ------------------------------------HHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             ------------------------------------32000010010011000345245368998889999998510334
Q gi|255764515|r  228 ------------------------------------SLDIADYQNIDKPILITKKVPLPQPVMKQYHKFQRELYCDLQGE  271 (458)
Q Consensus       228 ------------------------------------~~~~~~~~~l~~~~~~~~~v~l~~~~~~~y~~~~~~~~~~~~~~  271 (458)
T Consensus       381 ~~l~~~~~~~~~~~~~~r~~li~~Lldr~gtgrvlfRntRa~v~gfp~R~l~~~~l~~~~~~~~~~~----~~-------  449 (955)
T PRK04914        381 EPLLQAINSDSEDAQAARQELISELLDRHGTGRVLFRNTRAAVKGFPKRELHPYPLPLPEQYQTAIR----KS-------  449 (955)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHH----HH-------
T ss_conf             4789875214445699999999999862321577776567774316554531056787156787654----32-------


Q ss_pred             CCHHHHHHHHHHHHH-HCCCCCC--CCCCCCCCHHCCCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHH---------
Q ss_conf             520223478888754-2035410--0022343000134333325665412488403422236788866410---------
Q gi|255764515|r  272 NIEAFNSASKTVKCL-QLANGAV--YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK---------  339 (458)
Q Consensus       272 ~~~~~~~~~~~~~l~-q~~~~~~--~~~~~~~~~~~~~~k~~~l~~il~~~~~~kviif~~~~~~~~~i~~---------  339 (458)
T Consensus       450 ---------~~~~~~~~l~~E~~~~~~~~~~~~~~~~D~rv~~Li~~Lk~~~~eKvLVFte~~~Ta~~L~~~Lr~~~Gi~  520 (955)
T PRK04914        450 ---------LEARARDMLYPEQIYQEFEGDNATWWNFDPRVEWLIDFLKSHRSEKVLVICAKAETALQLEQALREREGIR  520 (955)
T ss_pred             ---------HHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCC
T ss_conf             ---------32467875173566654565565542138899999999985779858999683899999999998755995


Q ss_pred             --CCCCCCCHHHHHHHHHHHCCCC--CCEEEEEHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHCCCC
Q ss_conf             --0026533445899876424588--558998442211162200178599990899898686445666620220203787
Q gi|255764515|r  340 --AFPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK  415 (458)
Q Consensus       340 --~~~~g~~~~~r~~~i~~f~~~~--~~vli~s~~~~~~GlnL~~a~~~iI~~~~~wn~~~~~Q~~gRi~~~r~hR~Gq~  415 (458)
T Consensus       521 ~avfh~gms~~ERdraaa~Fa~~e~gaqVLI~T-EagsEG~NLQF-~~~LVnyDLPWNP~rLEQRIGRl-----DRiGQ~  593 (955)
T PRK04914        521 AAVFHEGMSIIERDRAAAYFADEEDGAQVLLCS-EIGSEGRNFQF-ASHLVLFDLPFNPDLLEQRIGRL-----DRIGQK  593 (955)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEE-CCCCCCCCHHH-HHHHEECCCCCCHHHHHHHHHHH-----HHCCCC
T ss_conf             699709999899999999861767785199972-52124503777-43523525898765889985206-----542786


Q ss_pred             CCEEEEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf             75289999858996899999999999999
Q gi|255764515|r  416 RAVFVYYLIAQNTIDELVLQRLRTKSTIQ  444 (458)
Q Consensus       416 ~~v~v~~li~~~tide~i~~~~~~K~~~~  444 (458)
T Consensus       594 ~dV~Ihvpy~~~s~q~~l~~wy~~gl~af  622 (955)
T PRK04914        594 HDIQIHVPYLEGTAQERLFRWYHEGLNAF  622 (955)
T ss_pred             CCEEEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf             75079862028988999999999888897