HHsearch alignment for GI: 255764515 and conserved domain: PRK11057
>PRK11057 ATP-dependent DNA helicase RecQ; Provisional.
Probab=99.91 E-value=3.5e-21 Score=146.59 Aligned_cols=295 Identities=17% Similarity=0.248 Sum_probs=182.4
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECC-HHHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 874789999999996798099958899868999999999997599949999160-4656999999998558888159998
Q gi|255764515|r 2 NLAPHQTKIVDWILDHKRCAIWASMGSGKTVSVLTALSYIHLWGEKSVLVIAPL-RVAQSVWTSEVQRWSNFSHMNISVI 80 (458)
Q Consensus 2 ~L~p~Q~~~v~~~~~~~~~ll~~~~G~GKT~~al~~~~~l~~~~~~~~LIv~P~-~l~~~~W~~Ei~kf~~~~~~~~~~~ 80 (458)
T Consensus 25 ~Fr~~Q~e~i~~~l~g~D~l~~mpTG~GKSlcy--QlPal~~--~g~tiVisPLisLm~DQ-v~~L~~----~gi~a~~l 95 (607)
T PRK11057 25 QFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCY--QIPALVL--DGLTLVVSPLISLMKDQ-VDQLLA----NGVAAACL 95 (607)
T ss_pred CCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHH--HHHHHHC--CCCEEEECCHHHHHHHH-HHHHHH----CCCCEEEE
T ss_conf 345769999999986998899878995597999--9999877--99889986879999999-999997----89929995
Q ss_pred ECC--HHHHHH----HHCCCCCEEEECCCCHHHHH-HHCCCCCCCCEEECCCCCCCCCCCC-CCHHHHHHHHHHHHH--C
Q ss_conf 589--789888----73077986998064202334-4200011322044045310024654-311567777665430--5
Q gi|255764515|r 81 TGT--VKQRTK----VLKTPAVLYVINFENLGWLV-QELKGTWPFATIVVDESTKLKSFRL-RQGSKTARALAKPAW--E 150 (458)
Q Consensus 81 ~g~--~~~r~~----~~~~~~~i~i~s~e~~~~~~-~~~~~~~~~~~iIiDEaH~lkn~~~-~~~s~~~~~l~~~~~--~ 150 (458)
T Consensus 96 ~s~~~~~e~~~~~~~~~~g~~~llyvtPErl~~~~~~~~l~~~~i~~~viDEAHcvs~WGhdFRp~--Y~~l~~l~~~~~ 173 (607)
T PRK11057 96 NSTQTREQQLEVMAGCRTGQIKLLYIAPERLMMDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPE--YAALGQLRQRFP 173 (607)
T ss_pred CCCCCHHHHHHHHHHHHCCCCCEEEECHHHHCCHHHHHHHHHCCCCEEEEEHHHHHHHCCCCCHHH--HHHHHHHHHHCC
T ss_conf 699999999999999975998799988558569789999971886648853066675415500388--999999999769
Q ss_pred CCEEEEECCCCHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98079965840231001013467751788877532778877736956403300002455554558999997424543320
Q gi|255764515|r 151 SERFIELTGTPSPNGLIDLWGQIWFLDKGKRLGRVFQSFVARWFNTTQIGSHIGAVRYTAKETAQKEIEAQLSDCCLSLD 230 (458)
Q Consensus 151 ~~~~l~LTgTPi~n~~~el~~ll~~l~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 230 (458)
T Consensus 174 ~~p~~AlTATAt~~v~~di~~~L~l~~~~~~~~----------------------------------------------- 206 (607)
T PRK11057 174 TLPFMALTATADDTTRQDIVRLLGLNDPLIQIS----------------------------------------------- 206 (607)
T ss_pred CCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEC-----------------------------------------------
T ss_conf 997489996368789999999708999807825-----------------------------------------------
Q ss_pred CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCC
Q ss_conf 00010010011000345245368998889999998510334520223478888754203541000223430001343333
Q gi|255764515|r 231 IADYQNIDKPILITKKVPLPQPVMKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 310 (458)
Q Consensus 231 ~~~~~~l~~~~~~~~~v~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~q~~~~~~~~~~~~~~~~~~~~k~~ 310 (458)
T Consensus 207 -----~f~RpNl~~~v~~~~--------------------------------------------------------~~~~ 225 (607)
T PRK11057 207 -----SFDRPNIRYMLMEKF--------------------------------------------------------KPLD 225 (607)
T ss_pred -----CCCCCCCEEEEEECC--------------------------------------------------------CHHH
T ss_conf -----778887414555447--------------------------------------------------------7399
Q ss_pred CHHHHHHCCCCCEEEEHHHHHHHHHHHHH----------CCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCC
Q ss_conf 25665412488403422236788866410----------00265334458998764245885589984422111622001
Q gi|255764515|r 311 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 380 (458)
Q Consensus 311 ~l~~il~~~~~~kviif~~~~~~~~~i~~----------~~~~g~~~~~r~~~i~~f~~~~~~vli~s~~~~~~GlnL~~ 380 (458)
T Consensus 226 ~~~~~~~~~~~~sgIIYc~trk~~e~la~~L~~~G~~~~~YHagl~~~~R~~~q~~f~~~~~~vivAT-~AFGMGIdk~d 304 (607)
T PRK11057 226 QLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLDNDVRADVQEAFQRDDLQIVVAT-VAFGMGINKPN 304 (607)
T ss_pred HHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEEE-HHHHCCCCCCC
T ss_conf 99999870689977999692899999999998579754530589997899999998756887589975-01105767777
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCCHHCCCCCCEEEEE
Q ss_conf 785999908998986864456666202202037877528999
Q gi|255764515|r 381 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 422 (458)
Q Consensus 381 a~~~iI~~~~~wn~~~~~Q~~gRi~~~r~hR~Gq~~~v~v~~ 422 (458)
T Consensus 305 -VR~ViH~~~P~s~e~yyQE~GRA-----GRDG~~a~c~l~y 340 (607)
T PRK11057 305 -VRFVVHFDIPRNIESYYQETGRA-----GRDGLPAEAMLFY 340 (607)
T ss_pred -CCEEEECCCCCCHHHHHHHHHHC-----CCCCCCCEEEEEE
T ss_conf -66799778999999999988635-----2589854189985