HHsearch alignment for GI: 255764515 and conserved domain: PRK11634
>PRK11634 ATP-dependent RNA helicase DeaD; Provisional.
Probab=99.93 E-value=3.6e-23 Score=158.60 Aligned_cols=308 Identities=17% Similarity=0.214 Sum_probs=192.2
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHH-HHHHHHHHHC-CCCCEEEEECCHHHHHHHHHHHHHHCC-CCCCEEE
Q ss_conf 874789999999996798099958899868999-9999999975-999499991604656999999998558-8881599
Q gi|255764515|r 2 NLAPHQTKIVDWILDHKRCAIWASMGSGKTVSV-LTALSYIHLW-GEKSVLVIAPLRVAQSVWTSEVQRWSN-FSHMNIS 78 (458)
Q Consensus 2 ~L~p~Q~~~v~~~~~~~~~ll~~~~G~GKT~~a-l~~~~~l~~~-~~~~~LIv~P~~l~~~~W~~Ei~kf~~-~~~~~~~ 78 (458)
T Consensus 28 ~PTpIQ~~aIP~iL~GkDvi~~AqTGSGKTlAFlLPiL~~l~~~~~~pqaLIL~PTRELA~QV~~~~~~l~~~~~~i~v~ 107 (629)
T PRK11634 28 KPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLHNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVV 107 (629)
T ss_pred CCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 99999999999996799889978884789999999999986623689868997899899999999999997217997799
Q ss_pred EEECCHH--HHHHHHCCCCCEEEECCCCHHHHHHH-CCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf 9858978--98887307798699806420233442-00011322044045310024654311567777665430598079
Q gi|255764515|r 79 VITGTVK--QRTKVLKTPAVLYVINFENLGWLVQE-LKGTWPFATIVVDESTKLKSFRLRQGSKTARALAKPAWESERFI 155 (458)
Q Consensus 79 ~~~g~~~--~r~~~~~~~~~i~i~s~e~~~~~~~~-~~~~~~~~~iIiDEaH~lkn~~~~~~s~~~~~l~~~~~~~~~~l 155 (458)
T Consensus 108 ~l~GG~~~~~q~~~L~~g~~IVVgTPGRL~d~l~~~~l~L~~l~~lVLDEAD~mL~~gF~---~di~~Il~~lp~~~Qt~ 184 (629)
T PRK11634 108 ALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFI---EDVETIMAQIPEGHQTA 184 (629)
T ss_pred EEECCCCHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCCHHHCCEEEEECHHHHCCCCCH---HHHHHHHHHCCCCCEEE
T ss_conf 998997789999986279999996989999999729641200767898671553363659---99999998674031446
Q ss_pred EECCCCHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 96584023100101346775178887753277887773695640330000245555455899999742454332000010
Q gi|255764515|r 156 ELTGTPSPNGLIDLWGQIWFLDKGKRLGRVFQSFVARWFNTTQIGSHIGAVRYTAKETAQKEIEAQLSDCCLSLDIADYQ 235 (458)
Q Consensus 156 ~LTgTPi~n~~~el~~ll~~l~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 235 (458)
T Consensus 185 LfSATm-p~~i--------------------~~la~~~l~~P~---------------------------~i~i~~~-~- 214 (629)
T PRK11634 185 LFSATM-PEAI--------------------RRITRRFMKEPQ---------------------------EVRIQSS-V- 214 (629)
T ss_pred EEECCC-CHHH--------------------HHHHHHHCCCCE---------------------------EEEECCC-C-
T ss_conf 663146-5999--------------------999998756987---------------------------9740455-5-
Q ss_pred CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHH
Q ss_conf 01001100034524536899888999999851033452022347888875420354100022343000134333325665
Q gi|255764515|r 236 NIDKPILITKKVPLPQPVMKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 315 (458)
Q Consensus 236 ~l~~~~~~~~~v~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~q~~~~~~~~~~~~~~~~~~~~k~~~l~~i 315 (458)
T Consensus 215 -~t~~~i~q~~~------------------------------------------------------~v~~~~K~~aL~~~ 239 (629)
T PRK11634 215 -TTRPDISQSYW------------------------------------------------------TVWGMRKNEALVRF 239 (629)
T ss_pred -CCCCCCEEEEE------------------------------------------------------EECCHHHHHHHHHH
T ss_conf -55776305999------------------------------------------------------96524579999999
Q ss_pred HHCCCCCEEEEHHHHHHHHHHHHH----------CCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCEE
Q ss_conf 412488403422236788866410----------0026533445899876424588558998442211162200178599
Q gi|255764515|r 316 IEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 385 (458)
Q Consensus 316 l~~~~~~kviif~~~~~~~~~i~~----------~~~~g~~~~~r~~~i~~f~~~~~~vli~s~~~~~~GlnL~~a~~~i 385 (458)
T Consensus 240 L~~~~~~~~IIF~~Tk~~~~~l~~~L~~~g~~~~~LHgdm~q~~R~~~l~~Fr~g~~~ILVaT-DvaARGLDi~~-V~~V 317 (629)
T PRK11634 240 LEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIAT-DVAARGLDVER-ISLV 317 (629)
T ss_pred HHHCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEC-CCCCCCCCCCC-CCEE
T ss_conf 861588848999822788999999999769965765689999999999999975999889878-62105577256-8889
Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEEEC
Q ss_conf 99089989868644566662022020378775289999858
Q gi|255764515|r 386 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 426 (458)
Q Consensus 386 I~~~~~wn~~~~~Q~~gRi~~~r~hR~Gq~~~v~v~~li~~ 426 (458)
T Consensus 318 INyDlP~d~e~YVHRiGRTG-----RaGr~--G~Aitfv~~ 351 (629)
T PRK11634 318 VNYDIPMDSESYVHRIGRTG-----RAGRA--GRALLFVEN 351 (629)
T ss_pred EEECCCCCHHHCCCCCCCCC-----CCCCC--EEEEEEECH
T ss_conf 99689897434010258331-----68996--469998888