HHsearch alignment for GI: 255764515 and conserved domain: PRK12323
>PRK12323 DNA polymerase III subunits gamma and tau; Provisional.
Probab=95.87 E-value=0.11 Score=28.50 Aligned_cols=115 Identities=13% Similarity=0.126 Sum_probs=56.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCC--CCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCE
Q ss_conf 099958899868999999999997599--949999160465699999999855888815999858978988873077986
Q gi|255764515|r 20 CAIWASMGSGKTVSVLTALSYIHLWGE--KSVLVIAPLRVAQSVWTSEVQRWSNFSHMNISVITGTVKQRTKVLKTPAVL 97 (458)
Q Consensus 20 ~ll~~~~G~GKT~~al~~~~~l~~~~~--~~~LIv~P~~l~~~~W~~Ei~kf~~~~~~~~~~~~g~~~~r~~~~~~~~~i 97 (458)
T Consensus 41 ylf~G~rGvGKTt~ari~Ak~lnc~~~~~~~g~~~~pcg~C~~--C~~i~~---g~~~d~~EiDaas~~~v~~------- 108 (721)
T PRK12323 41 YLFTGTRGVGKTTLSRILAKSLNCTGPDGEGGITAQPCGQCRA--CTEIDA---GRFVDYIEMDAASNRGVDE------- 108 (721)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH--HHHHHC---CCCCCEEEEECCCCCCHHH-------
T ss_conf 7502799888989999999997689986678987887877654--687756---8987647743676788899-------
Q ss_pred EEECCCCHHHHHHH---CCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHH-HCCCEEEEECCC
Q ss_conf 99806420233442---0001132204404531002465431156777766543-059807996584
Q gi|255764515|r 98 YVINFENLGWLVQE---LKGTWPFATIVVDESTKLKSFRLRQGSKTARALAKPA-WESERFIELTGT 160 (458)
Q Consensus 98 ~i~s~e~~~~~~~~---~~~~~~~~~iIiDEaH~lkn~~~~~~s~~~~~l~~~~-~~~~~~l~LTgT 160 (458)
T Consensus 109 -------~r~l~~~~~y~P~~~~~KvyiiDevhmls~-------~afnalLKtlEePP~hv~FilaT 161 (721)
T PRK12323 109 -------MAQLLDQAVYAPTAGRFKVYMIDEVHMLTN-------HAFNAMLKTLEEPPPHVKFILAT 161 (721)
T ss_pred -------HHHHHHHCCCCCCCCCEEEEEEECCCCCCH-------HHHHHHHHHHCCCCCCEEEEEEC
T ss_conf -------999998545588766446999854000589-------99999998401797553899943