HHsearch alignment for GI: 255764515 and conserved domain: PRK13826
>PRK13826 Dtr system oriT relaxase; Provisional.
Probab=96.91 E-value=0.02 Score=32.91 Aligned_cols=131 Identities=15% Similarity=0.113 Sum_probs=73.9
Q ss_pred CCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 874789999999996798-0999588998689999999999975999499991604656999999998558888159998
Q gi|255764515|r 2 NLAPHQTKIVDWILDHKR-CAIWASMGSGKTVSVLTALSYIHLWGEKSVLVIAPLRVAQSVWTSEVQRWSNFSHMNISVI 80 (458)
Q Consensus 2 ~L~p~Q~~~v~~~~~~~~-~ll~~~~G~GKT~~al~~~~~l~~~~~~~~LIv~P~~l~~~~W~~Ei~kf~~~~~~~~~~~ 80 (458)
T Consensus 381 ~Ls~EQ~~Av~hiT~~~~Ia~VvG~AGaGKStm-L~aAReawEa~GyrV~GaALsGkAA----egLe~---~sGI~SrTl 452 (1102)
T PRK13826 381 RLSDEQKTAIEHVAGAERIAAVIGRAGAGKTTM-MKAAREAWEAAGYRVVGGALAGKAA----EGLEK---EAGIASRTL 452 (1102)
T ss_pred CCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHH-HHHHHHHHHHCCCEEEEECCCHHHH----HHHHH---CCCCCCHHH
T ss_conf 389999999998537886689984288878899-9999999997797798015007899----97753---469530338
Q ss_pred ECCHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 58978988873077986998064202334420001132204404531002465431156777766543059807996584
Q gi|255764515|r 81 TGTVKQRTKVLKTPAVLYVINFENLGWLVQELKGTWPFATIVVDESTKLKSFRLRQGSKTARALAKPAWESERFIELTGT 160 (458)
Q Consensus 81 ~g~~~~r~~~~~~~~~i~i~s~e~~~~~~~~~~~~~~~~~iIiDEaH~lkn~~~~~~s~~~~~l~~~~~~~~~~l~LTgT 160 (458)
T Consensus 453 As----~e~~w~~g-----------------r~~L~~~dVlVIDEAGMV------gsrqmarvl~-~ae~aGAKvVLVGD 504 (1102)
T PRK13826 453 SS----WELRWNQG-----------------RDQLDNKTVFVLDEAGMV------SSRQMALFVE-AVTRAGAKLVLVGD 504 (1102)
T ss_pred HH----HHHHHCCC-----------------CCCCCCCCEEEEECCCCC------CHHHHHHHHH-HHHHCCCEEEEECC
T ss_conf 99----99874358-----------------655678738998455565------5799999999-99975998999688
Q ss_pred CHHHHCCC
Q ss_conf 02310010
Q gi|255764515|r 161 PSPNGLID 168 (458)
Q Consensus 161 Pi~n~~~e 168 (458)
T Consensus 505 ~~QLQpIe 512 (1102)
T PRK13826 505 PEQLQPIE 512 (1102)
T ss_pred HHHHCCCC
T ss_conf 78827610