HHsearch alignment for GI: 255764515 and conserved domain: TIGR01420
>TIGR01420 pilT_fam twitching motility protein; InterPro: IPR006321 These represent the PilT subfamily of proteins related to GspE, a protein involved in type II secretion (also called the General Secretion Pathway). PilT is an apparent cytosolic ATPase associated with type IV pilus systems. It is not required for pilin biogenesis, but is required for twitching motility and social gliding behaviors, shown in some species, powered by pilus retraction . Members of this family may be found in some species that do not have type IV pili but have related structures for DNA uptake and natural transformation. ; GO: 0005524 ATP binding, 0006810 transport.
Probab=92.11 E-value=0.37 Score=25.29 Aligned_cols=40 Identities=20% Similarity=0.342 Sum_probs=21.7
Q ss_pred HHHHHHCCCEEE--EECCCCCHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 999996798099--9588998689999999999975999499
Q gi|255764515|r 11 VDWILDHKRCAI--WASMGSGKTVSVLTALSYIHLWGEKSVL 50 (458)
Q Consensus 11 v~~~~~~~~~ll--~~~~G~GKT~~al~~~~~l~~~~~~~~L 50 (458)
T Consensus 119 ~~~~a~~~~GLiLVTGPTGSGKSTTlAsmIDyIN~~~~~HIi 160 (350)
T TIGR01420 119 LRELAERPRGLILVTGPTGSGKSTTLASMIDYINKNKAGHII 160 (350)
T ss_pred HHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCE
T ss_conf 999983669938987688986789999999787403888825