HHsearch alignment for GI: 255764515 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=96.59 E-value=0.037 Score=31.30 Aligned_cols=126 Identities=21% Similarity=0.084 Sum_probs=66.3
Q ss_pred CHHHHHHHHHH----HH-C---CCEEEEECCCCCHHHHHHHHHHHHHHCCCC--CE-EEEEC-----CHHHHHHHHHHHH
Q ss_conf 47899999999----96-7---980999588998689999999999975999--49-99916-----0465699999999
Q gi|255764515|r 4 APHQTKIVDWI----LD-H---KRCAIWASMGSGKTVSVLTALSYIHLWGEK--SV-LVIAP-----LRVAQSVWTSEVQ 67 (458)
Q Consensus 4 ~p~Q~~~v~~~----~~-~---~~~ll~~~~G~GKT~~al~~~~~l~~~~~~--~~-LIv~P-----~~l~~~~W~~Ei~ 67 (458)
T Consensus 22 RdeqI~~l~~~L~~~l~PG~~P~Ni~iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~~~~~NC~~~~T~y-~~~~~L~ 100 (383)
T TIGR02928 22 RDEQIEELAKALRPILRPGSRPSNIFIYGKTGTGKTAVTKYVMKELEEAAEDRDVRDVSTVYINCQILDTSY-QVLVELA 100 (383)
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH-HHHHHHH
T ss_conf 678999999998875067489872588788898788999999999999862269971589997785468469-9999999
Q ss_pred HHCCCCCCEE-EEEECCHHHHHHHHCCCCCEEEECCCCHHHHHHHCC-CCCCCCEEECCCCCCC--CCCCCCCHHHHHHH
Q ss_conf 8558888159-998589789888730779869980642023344200-0113220440453100--24654311567777
Q gi|255764515|r 68 RWSNFSHMNI-SVITGTVKQRTKVLKTPAVLYVINFENLGWLVQELK-GTWPFATIVVDESTKL--KSFRLRQGSKTARA 143 (458)
Q Consensus 68 kf~~~~~~~~-~~~~g~~~~r~~~~~~~~~i~i~s~e~~~~~~~~~~-~~~~~~~iIiDEaH~l--kn~~~~~~s~~~~~ 143 (458)
T Consensus 101 ~~ln~~~~~~~vP~tG~s~~~----------------~~~~l~~~l~~~~~~~~~ivLDEiD~Lv~~~~d~PAyS~~LY~ 164 (383)
T TIGR02928 101 NQLNRRGSGEEVPTTGLSTSE----------------VFRELYKELNRERGDSLIIVLDEIDKLVRKDDDDPAYSKLLYQ 164 (383)
T ss_pred HHHCCCCCCCCCCCCCCCHHH----------------HHHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCCHHHHHHHHH
T ss_conf 985157788889887787899----------------9999999983201887999862310221588888078788534
Q ss_pred HHH
Q ss_conf 665
Q gi|255764515|r 144 LAK 146 (458)
Q Consensus 144 l~~ 146 (458)
T Consensus 165 L~R 167 (383)
T TIGR02928 165 LSR 167 (383)
T ss_pred HHH
T ss_conf 331