HHsearch alignment for GI: 255764515 and conserved domain: TIGR03499
>TIGR03499 FlhF flagellar biosynthetic protein FlhF.
Probab=91.34 E-value=0.9 Score=22.91 Aligned_cols=48 Identities=23% Similarity=0.266 Sum_probs=23.6
Q ss_pred HCCCCCCEEEEEHHHCCCCC--CCCCCCCEE-EEECCCCCHHHHHHHHHHH
Q ss_conf 24588558998442211162--200178599-9908998986864456666
Q gi|255764515|r 357 WNEGKIPLLFAHPASCGHGL--NLQYGGNIL-VFFSLWWDLEEHQQMIERI 404 (458)
Q Consensus 357 f~~~~~~vli~s~~~~~~Gl--nL~~a~~~i-I~~~~~wn~~~~~Q~~gRi 404 (458)
T Consensus 220 l~~~~~~V~lIT~DtyRigA~eQLk~ya~il~vp~~vv~~~~~l~~~l~~~ 270 (282)
T TIGR03499 220 LEHGKKKVALITTDTYRIGAVEQLKTYAKILGVPVKVARDPKELAKALERL 270 (282)
T ss_pred HHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHC
T ss_conf 973899679998077767899999999999597489939999999999865