HHsearch alignment for GI: 255764515 and conserved domain: cd00984
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=94.99 E-value=0.23 Score=26.51 Aligned_cols=36 Identities=28% Similarity=0.115 Sum_probs=26.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 099958899868999999999997599949999160
Q gi|255764515|r 20 CAIWASMGSGKTVSVLTALSYIHLWGEKSVLVIAPL 55 (458)
Q Consensus 20 ~ll~~~~G~GKT~~al~~~~~l~~~~~~~~LIv~P~ 55 (458)
T Consensus 16 ~vi~a~~g~GKS~~~~~la~~~a~~~g~~V~~~SlE 51 (242)
T cd00984 16 IIIAARPSMGKTAFALNIAENIAKKQGKPVLFFSLE 51 (242)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 999968999999999999999999779959999333