HHsearch alignment for GI: 255764515 and conserved domain: pfam03796
>pfam03796 DnaB_C DnaB-like helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=97.08 E-value=0.0078 Score=35.41 Aligned_cols=112 Identities=21% Similarity=0.159 Sum_probs=53.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEC--CHHHHH---HHH--C
Q ss_conf 099958899868999999999997599949999160465699999999855888815999858--978988---873--0
Q gi|255764515|r 20 CAIWASMGSGKTVSVLTALSYIHLWGEKSVLVIAPLRVAQSVWTSEVQRWSNFSHMNISVITG--TVKQRT---KVL--K 92 (458)
Q Consensus 20 ~ll~~~~G~GKT~~al~~~~~l~~~~~~~~LIv~P~~l~~~~W~~Ei~kf~~~~~~~~~~~~g--~~~~r~---~~~--~ 92 (458)
T Consensus 22 ~vi~g~pg~GKS~~~~~~a~~~a~~~g~~Vl~~slEm~~~~~~~R~~a~~~~v~~~~i--~~~~~~~~~~~~~~~~~~~~ 99 (186)
T pfam03796 22 IIIAARPSMGKTAFALNIARNAALKQDKPVLFFSLEMSAEQLAERLLSSESRISSSKL--RSGQLSDEDWERLAEAAGEL 99 (186)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHH--HCCCHHHHHHHHHHHHHHHH
T ss_conf 9999679998799999999999997099668754755299999999998626765554--12512167999999999998
Q ss_pred CCCCEEEECC-----CCHHHHHHHCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 7798699806-----4202334420001132204404531002465
Q gi|255764515|r 93 TPAVLYVINF-----ENLGWLVQELKGTWPFATIVVDESTKLKSFR 133 (458)
Q Consensus 93 ~~~~i~i~s~-----e~~~~~~~~~~~~~~~~~iIiDEaH~lkn~~ 133 (458)
T Consensus 100 ~~~~l~i~~~~~~t~~~i~~~i~~~~~~~~~~~vvvDyl~l~~~~~ 145 (186)
T pfam03796 100 SEAPLYIDDTPGLSLSELRAQARRLKREHGLGLIVIDYLQLMQGSK 145 (186)
T ss_pred HCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCC
T ss_conf 5398688479999899999999999985599889974898636778