HHsearch alignment for GI: 255764515 and conserved domain: pfam06745
>pfam06745 KaiC KaiC. This family represents a conserved region within bacterial and archaeal proteins, most of which are hypothetical. More than one copy is sometimes found in each protein. This family includes KaiC, which is one of the Kai proteins among which direct protein-protein association may be a critical process in the generation of circadian rhythms in cyanobacteria.
Probab=94.77 E-value=0.16 Score=27.54 Aligned_cols=45 Identities=24% Similarity=0.182 Sum_probs=28.4
Q ss_pred HHHHHHHHCC-----CEEEEECCCCCHHHHHHHHHHH-HHHCCCCCEEEEEC
Q ss_conf 9999999679-----8099958899868999999999-99759994999916
Q gi|255764515|r 9 KIVDWILDHK-----RCAIWASMGSGKTVSVLTALSY-IHLWGEKSVLVIAP 54 (458)
Q Consensus 9 ~~v~~~~~~~-----~~ll~~~~G~GKT~~al~~~~~-l~~~~~~~~LIv~P 54 (458)
T Consensus 6 ~~LD~~l~GGi~~gs~~LI~G~pGsGKT~la~qfl~~ga~~~g-e~~lYis~ 56 (231)
T pfam06745 6 PGLDEILKGGIPEGRVVLITGGPGTGKTIFGLQFLYNGALEYG-EPGVYVTL 56 (231)
T ss_pred HHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC-CCEEEEEE
T ss_conf 5688631699829969999858972599999999999998658-96899981