HHsearch alignment for GI: 255764515 and conserved domain: pfam07652
>pfam07652 Flavi_DEAD Flavivirus DEAD domain.
Probab=98.98 E-value=5.5e-09 Score=72.66 Aligned_cols=127 Identities=20% Similarity=0.136 Sum_probs=72.6
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCEEEE
Q ss_conf 99958899868999999999997599949999160465699999999855888815999858978988873077986998
Q gi|255764515|r 21 AIWASMGSGKTVSVLTALSYIHLWGEKSVLVIAPLRVAQSVWTSEVQRWSNFSHMNISVITGTVKQRTKVLKTPAVLYVI 100 (458)
Q Consensus 21 ll~~~~G~GKT~~al~~~~~l~~~~~~~~LIv~P~~l~~~~W~~Ei~kf~~~~~~~~~~~~g~~~~r~~~~~~~~~i~i~ 100 (458)
T Consensus 6 ~ld~HPGaGKTr~vLP~~v~~~i~~~lRtlVLaPTRVV~----~Em~eAL~g~~vr--~~t~a---~~~~~~~~~ivdvm 76 (146)
T pfam07652 6 VLDLHPGAGKTRKVLPELVRECIDRRLRTLVLAPTRVVL----AEMEEALRGLPIR--YHTPA---VSSEHTGREIVDVM 76 (146)
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHH----HHHHHHHCCCCCE--EECHH---HHCCCCCCCEEEEE
T ss_conf 985389999702248999999997286189977279999----9999997589946--75234---31366888418897
Q ss_pred CCCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHH-HH-HCCCEEEEECCCC
Q ss_conf 0642023344200011322044045310024654311567777665-43-0598079965840
Q gi|255764515|r 101 NFENLGWLVQELKGTWPFATIVVDESTKLKSFRLRQGSKTARALAK-PA-WESERFIELTGTP 161 (458)
Q Consensus 101 s~e~~~~~~~~~~~~~~~~~iIiDEaH~lkn~~~~~~s~~~~~l~~-~~-~~~~~~l~LTgTP 161 (458)
T Consensus 77 CHAT~t~r~l~~~~~~ny~viIMDE~H~~-DP----~SIAarG~~~~~~~~g~~a~i~mTATP 134 (146)
T pfam07652 77 CHATFTQRLLSPVRVPNYEVIIMDEAHFT-DP----ASIAARGYISTLVELGEAAAIFMTATP 134 (146)
T ss_pred CHHHHHHHHHCCCCCCCEEEEEEECCCCC-CH----HHHHHHHHHHHHHHCCCEEEEEEECCC
T ss_conf 15988889736888564479998512238-98----999988999988543865799995689