HHsearch alignment for GI: 255764515 and conserved domain: smart00487
>smart00487 DEXDc DEAD-like helicases superfamily.
Probab=99.90 E-value=2e-22 Score=154.08 Aligned_cols=159 Identities=21% Similarity=0.234 Sum_probs=110.9
Q ss_pred CCCHHHHHHHHHHHHC-CCEEEEECCCCCHHHHHHHHHHHHHHC-CCCCEEEEECCHHHHHHHHHHHHHHCCCCC-CEEE
Q ss_conf 8747899999999967-980999588998689999999999975-999499991604656999999998558888-1599
Q gi|255764515|r 2 NLAPHQTKIVDWILDH-KRCAIWASMGSGKTVSVLTALSYIHLW-GEKSVLVIAPLRVAQSVWTSEVQRWSNFSH-MNIS 78 (458)
Q Consensus 2 ~L~p~Q~~~v~~~~~~-~~~ll~~~~G~GKT~~al~~~~~l~~~-~~~~~LIv~P~~l~~~~W~~Ei~kf~~~~~-~~~~ 78 (458)
T Consensus 8 ~~~~~Q~~~~~~~~~~~~~~~i~~~tGsGKT~~~~~~~~~~~~~~~~~~~li~~P~~~l~~q~~~~~~~~~~~~~~~~~~ 87 (201)
T smart00487 8 PLRPYQKEAIEALLSGLRDVILAAPTGSGKTLAALLPALEALKRGKGKRVLVLVPTRELAEQWAEELKKLGPSLGLKVVG 87 (201)
T ss_pred CCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 99988999999998389988998999960999999999998633899759999085999999998860102102044556
Q ss_pred EEECCH-H-HHHHHHCCCCCEEEECCCCHHHHHHHC-CCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf 985897-8-988873077986998064202334420-0011322044045310024654311567777665430598079
Q gi|255764515|r 79 VITGTV-K-QRTKVLKTPAVLYVINFENLGWLVQEL-KGTWPFATIVVDESTKLKSFRLRQGSKTARALAKPAWESERFI 155 (458)
Q Consensus 79 ~~~g~~-~-~r~~~~~~~~~i~i~s~e~~~~~~~~~-~~~~~~~~iIiDEaH~lkn~~~~~~s~~~~~l~~~~~~~~~~l 155 (458)
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~i~i~t~~~l~~~~~~~~~~~~~~~~vIiDE~H~~~~~--~~~~~~-~~~~~~~~~~~~~i 164 (201)
T smart00487 88 LYGGDSKREQLRKLESGKTDILVTTPGRLLDLLENDLLELSNVDLVILDEAHRLLDG--GFGDQL-EKLLKLLPKNVQLL 164 (201)
T ss_pred EECCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCCEEEEEECHHHHHCC--CCHHHH-HHHHHHCCCCCCEE
T ss_conf 524773799999997599989995589999999727545254319999896775125--709999-99999679999789
Q ss_pred EECCCCHH
Q ss_conf 96584023
Q gi|255764515|r 156 ELTGTPSP 163 (458)
Q Consensus 156 ~LTgTPi~ 163 (458)
T Consensus 165 ~lSAT~~~ 172 (201)
T smart00487 165 LLSATPPE 172 (201)
T ss_pred EECCCCCH
T ss_conf 99248986