HHsearch alignment for GI: 255764515 and conserved domain: smart00491
>smart00491 HELICc2 helicase superfamily c-terminal domain.
Probab=91.12 E-value=0.48 Score=24.58 Aligned_cols=55 Identities=13% Similarity=0.284 Sum_probs=32.7
Q ss_pred CCCCCCCHHHHHHHHHHHCCC-C--CCEEEEEH-HHCCCCCCCCC-CCCEEEEECCCCCH
Q ss_conf 002653344589987642458-8--55899844-22111622001-78599990899898
Q gi|255764515|r 340 AFPQGRTLDKDPCTIQEWNEG-K--IPLLFAHP-ASCGHGLNLQY-GGNILVFFSLWWDL 394 (458)
Q Consensus 340 ~~~~g~~~~~r~~~i~~f~~~-~--~~vli~s~-~~~~~GlnL~~-a~~~iI~~~~~wn~ 394 (458)
T Consensus 23 vf~E~~~~~~~~~~l~~f~~~~~~~gaiL~~v~~Gk~sEGiDf~~~~~r~viivglP~p~ 82 (142)
T smart00491 23 VFIEGKDSGETEELLEKYSAACEARGALLLAVARGKVSEGIDFPDDLGRAVIIVGIPFPN 82 (142)
T ss_pred EEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCEEEEEEEECCCCC
T ss_conf 999589835799999999986236981999984415752150599776599997089999