RPSBLAST alignment for GI: 255764515 and conserved domain: COG0553
>gnl|CDD|30899 COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]. Length = 866
Score = 93.7 bits (231), Expect = 9e-20
Identities = 94/523 (17%), Positives = 179/523 (34%), Gaps = 77/523 (14%)
Query: 2 NLAPHQTKIVDWILD-----HKRCAIWASMGSGKTVSVLTALSYIHLWGE---KSVLVIA 53
L P+Q + V+W+ + + MG GKTV + L + + L++
Sbjct: 338 ELRPYQLEGVNWLSELLRSNLLGGILADDMGLGKTVQTIALLLSLLESIKVYLGPALIVV 397
Query: 54 PLRVAQSVWTSEVQRWSNFSHMNISVI---TGTVKQRTKVLKTPAVLYVINFE----NLG 106
P + S W E ++++ + + + K+R + + VI F+
Sbjct: 398 PASLL-SNWKREFEKFAPDLRLVLVYHGEKSELDKKREALRDLLKLHLVIIFDVVITTYE 456
Query: 107 WLVQELKGTWPFATIVVDESTKLKSFRLRQGSKTARALAKPAWESERFIELTGTPSPNGL 166
L + L I D ++ R++ +++ A ++ ++LTGTP N L
Sbjct: 457 LLRRFLVDHGGLKKIEWDRVVLDEAHRIK-NDQSSEGKALQFLKALNRLDLTGTPLENRL 515
Query: 167 IDLWGQIWFLDKGKRLGRVFQSFVARWFNTTQIGSHIGAV--RYTAKETAQKEIEAQLSD 224
+LW + LG F F + Q IG + R E +K + +
Sbjct: 516 GELWSLLQEFLNPGLLGTSFAIFTRLFEKPIQAEEDIGPLEARELGIELLRKLLSPFILR 575
Query: 225 CCLSLDIADYQNIDKPILITKKVPLPQPVMKQY--------------------------- 257
D+ + + I + L + + Y
Sbjct: 576 -RTKEDVEVLKELPPKIEKVLECELSEEQRELYEALLEGAEKNQQLLEDLEKADSDENRI 634
Query: 258 ---------HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 308
+ C+ E + + L + Y ++ + +
Sbjct: 635 GDSELNILALLTRLRQICNHPALVDEGLEATFDRIVLLLREDKDFDYLKKPLIQLSKGKL 694
Query: 309 IKALEVI----IEKANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPC-TI 354
E++ +E+ + +++ F L L+ G T K I
Sbjct: 695 QALDELLLDKLLEEGHYHKVLIFSQFTPVLDLLEDYLKALGIKYVRLDGSTPAKRRQELI 754
Query: 355 QEWNEGKIPLLF-AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 413
+N + +F + G GLNL + ++ F WW+ Q I+R R Q
Sbjct: 755 DRFNADEEEKVFLLSLKAGGLGLNLTG-ADTVILFDPWWNPAVELQAIDRA--HRIGQ-- 809
Query: 414 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 456
KR V VY LI + TI+E +L+ K + D L++A ++ +
Sbjct: 810 -KRPVKVYRLITRGTIEEKILELQEKKQELLDSLIDAEGEKEL 851