RPSBLAST alignment for GI: 255764515 and conserved domain: KOG1000

>gnl|CDD|36218 KOG1000, KOG1000, KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily [Chromatin structure and dynamics]. Length = 689
 Score = 76.2 bits (187), Expect = 2e-14
 Identities = 98/468 (20%), Positives = 166/468 (35%), Gaps = 78/468 (16%)

Query: 2   NLAPHQTKIVDWILDHK-RCAIWASMGSGKTVSVLT-ALSYIHLWGEKSVLVIAPLRVAQ 59
            L P Q + V + L+   R  +   MG GKT+  L  A  Y   W    +L++ P  V  
Sbjct: 198 RLLPFQREGVIFALERGGRILLADEMGLGKTIQALAIARYYRAEW---PLLIVCPASVRF 254

Query: 60  SVWTSEVQRWSNFSHMNISVITGTVKQRTKVLKTPAVLYVINFENLGWLVQELKGTWPFA 119
           + W   + R+    H    V           + T   + ++++E L  L   LK    + 
Sbjct: 255 T-WAKALNRFLPSIHPIFVVDKS--SDPLPDVCTSNTVAIVSYEQLSLLHDILK-KEKYR 310

Query: 120 TIVVDESTKLKSFRLRQGSKTARALAKPAWESERFIELTGTPSPNGLIDLWGQIWFLDKG 179
            ++ DES  LK  + ++ +K A  L K A   +  I L+GTP+ +   +L+ QI  +D  
Sbjct: 311 VVIFDESHMLKDSKTKR-TKAATDLLKVA---KHVILLSGTPAVSRPSELYTQIRAVD-- 364

Query: 180 KRLGRVFQSFVARWFNTTQI--------GSHIGAVRYTAKETA-----QKEIEAQLSD-- 224
             L   F  F  R+ +  Q+         +++  +     +       + ++  QL    
Sbjct: 365 HTLFPNFHEFAIRYCDGKQVRFCFDYKGCTNLEELAALLFKRLMIRRLKADVLKQLPPKR 424

Query: 225 -----CCLSLDIADYQNIDKPILITKKVPLPQPVMKQYHKFQRELYCDLQGENIEAFNSA 279
                       A   ++ K      KV      M++ H+     Y         A    
Sbjct: 425 REVVYVSGGRIDARMDDLVKAAADYTKV----NSMERKHESLLLFYSLTGIAKAAAV--- 477

Query: 280 SKTVKCLQLANGAVYYDEEKHWKEV---HDEKIKALEVIIEKANAAPIIVAYHFNSDLAR 336
                C  +       D       V   H   +  ++V + K     I           R
Sbjct: 478 -----CEYILENYFLPDAPPRKFLVFAHHQIVLDTIQVEVNKRKVGSI-----------R 521

Query: 337 LQ-KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD-- 393
           +        RTL     + Q   E ++ +L     + G GL L     + VF  L W+  
Sbjct: 522 IDGSTPSHRRTLLCQ--SFQTSEEVRVAVLSI--TAAGVGLTLTAASVV-VFAELHWNPG 576

Query: 394 -LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 440
            L + +    RIG           +VFV YL+A+ T D+ +   L+ K
Sbjct: 577 VLLQAEDRAHRIGQK--------SSVFVQYLVAKGTADDYMWPMLQQK 616