RPSBLAST alignment for GI: 255764515 and conserved domain: KOG1000
>gnl|CDD|36218 KOG1000, KOG1000, KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily [Chromatin structure and dynamics]. Length = 689
Score = 76.2 bits (187), Expect = 2e-14
Identities = 98/468 (20%), Positives = 166/468 (35%), Gaps = 78/468 (16%)
Query: 2 NLAPHQTKIVDWILDHK-RCAIWASMGSGKTVSVLT-ALSYIHLWGEKSVLVIAPLRVAQ 59
L P Q + V + L+ R + MG GKT+ L A Y W +L++ P V
Sbjct: 198 RLLPFQREGVIFALERGGRILLADEMGLGKTIQALAIARYYRAEW---PLLIVCPASVRF 254
Query: 60 SVWTSEVQRWSNFSHMNISVITGTVKQRTKVLKTPAVLYVINFENLGWLVQELKGTWPFA 119
+ W + R+ H V + T + ++++E L L LK +
Sbjct: 255 T-WAKALNRFLPSIHPIFVVDKS--SDPLPDVCTSNTVAIVSYEQLSLLHDILK-KEKYR 310
Query: 120 TIVVDESTKLKSFRLRQGSKTARALAKPAWESERFIELTGTPSPNGLIDLWGQIWFLDKG 179
++ DES LK + ++ +K A L K A + I L+GTP+ + +L+ QI +D
Sbjct: 311 VVIFDESHMLKDSKTKR-TKAATDLLKVA---KHVILLSGTPAVSRPSELYTQIRAVD-- 364
Query: 180 KRLGRVFQSFVARWFNTTQI--------GSHIGAVRYTAKETA-----QKEIEAQLSD-- 224
L F F R+ + Q+ +++ + + + ++ QL
Sbjct: 365 HTLFPNFHEFAIRYCDGKQVRFCFDYKGCTNLEELAALLFKRLMIRRLKADVLKQLPPKR 424
Query: 225 -----CCLSLDIADYQNIDKPILITKKVPLPQPVMKQYHKFQRELYCDLQGENIEAFNSA 279
A ++ K KV M++ H+ Y A
Sbjct: 425 REVVYVSGGRIDARMDDLVKAAADYTKV----NSMERKHESLLLFYSLTGIAKAAAV--- 477
Query: 280 SKTVKCLQLANGAVYYDEEKHWKEV---HDEKIKALEVIIEKANAAPIIVAYHFNSDLAR 336
C + D V H + ++V + K I R
Sbjct: 478 -----CEYILENYFLPDAPPRKFLVFAHHQIVLDTIQVEVNKRKVGSI-----------R 521
Query: 337 LQ-KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD-- 393
+ RTL + Q E ++ +L + G GL L + VF L W+
Sbjct: 522 IDGSTPSHRRTLLCQ--SFQTSEEVRVAVLSI--TAAGVGLTLTAASVV-VFAELHWNPG 576
Query: 394 -LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 440
L + + RIG +VFV YL+A+ T D+ + L+ K
Sbjct: 577 VLLQAEDRAHRIGQK--------SSVFVQYLVAKGTADDYMWPMLQQK 616