RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|255764517|ref|YP_003084345.1| hypothetical protein CLIBASIA_05538 [Candidatus Liberibacter asiaticus str. psy62] (135 letters) >d1t6gc_ b.29.1.11 (C:) Xylanase II {Aspergillus kawachii [TaxId: 40384]} Length = 182 Score = 25.0 bits (55), Expect = 2.3 Identities = 11/54 (20%), Positives = 21/54 (38%) Query: 17 SVTYWAVGSKFVIPWDIKDPSRIHAEVGYSDGRVQELAISQDFDVDGLNALLTV 70 TY F + W+ S +G++ G + S ++ G ++ L V Sbjct: 15 DFTYDESAGTFSMYWEDGVSSDFVVGLGWTTGSSNAITYSAEYSASGSSSYLAV 68 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.317 0.135 0.394 Gapped Lambda K H 0.267 0.0539 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 494,714 Number of extensions: 20510 Number of successful extensions: 35 Number of sequences better than 10.0: 1 Number of HSP's gapped: 35 Number of HSP's successfully gapped: 6 Length of query: 135 Length of database: 2,407,596 Length adjustment: 76 Effective length of query: 59 Effective length of database: 1,364,116 Effective search space: 80482844 Effective search space used: 80482844 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 48 (22.7 bits)