RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|255764517|ref|YP_003084345.1| hypothetical protein
CLIBASIA_05538 [Candidatus Liberibacter asiaticus str. psy62]
         (135 letters)



>d1t6gc_ b.29.1.11 (C:) Xylanase II {Aspergillus kawachii [TaxId:
          40384]}
          Length = 182

 Score = 25.0 bits (55), Expect = 2.3
 Identities = 11/54 (20%), Positives = 21/54 (38%)

Query: 17 SVTYWAVGSKFVIPWDIKDPSRIHAEVGYSDGRVQELAISQDFDVDGLNALLTV 70
            TY      F + W+    S     +G++ G    +  S ++   G ++ L V
Sbjct: 15 DFTYDESAGTFSMYWEDGVSSDFVVGLGWTTGSSNAITYSAEYSASGSSSYLAV 68


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0539    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 494,714
Number of extensions: 20510
Number of successful extensions: 35
Number of sequences better than 10.0: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 6
Length of query: 135
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 59
Effective length of database: 1,364,116
Effective search space: 80482844
Effective search space used: 80482844
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 48 (22.7 bits)